Glycocaulis abyssi: AB6B38_10675
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Entry
AB6B38_10675 CDS
T10778
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
gaby Glycocaulis abyssi
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaby03021
]
AB6B38_10675 (nusA)
03009 Ribosome biogenesis [BR:
gaby03009
]
AB6B38_10675 (nusA)
Transcription machinery [BR:
gaby03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AB6B38_10675 (nusA)
Ribosome biogenesis [BR:
gaby03009
]
Prokaryotic type
rRNA transcription factors
AB6B38_10675 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
KH_1
DUF4358
HHH_2
Motif
Other DBs
NCBI-ProteinID:
XER16689
LinkDB
All DBs
Position
complement(2205070..2206818)
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AA seq
582 aa
AA seq
DB search
MAIGVSANRLELLQIARAVAQEKMIDEPLVLAAIEEAIQKAARSRYGSELDIRCSIHPKT
GEMKLTRHTTVVEEVENDSQEISLEEAKKIDPNAEIGTVFEEELPPIEFGRVASQTAKQV
ITQKVREAERERQYEEYKDRIGEIINGIVKRVEYGNAIIDLGKAEGIIRRNDAIPREALQ
PNDRVRAYIYDVRTEVRGPQIFLSRAHPDFMAALFAQEVPEVYEGIIEIPRVARDPGSRA
KIAVISNDSSIDPVGACVGMRGSRVQAVVNELAGEKIDIIPWNPDPATFIVNALQPAEVA
KVVLDEENQRIEVVVPDDQLSLAIGRRGQNVRLASQLTGWSIDILTEVEESERRQKEFAE
RTAIFMEALDVDEVIAQLLATEGFTDVEDLAFVELDEIAVIEGFDDETAEEIQTRAREYL
DKQAAEQDARRKELGVEDDVLAIEGVTLPMAVKFGENEVFTVDDLAGMTPDDLRGWYETR
DGERVREPGILDGFDIDAAEAERMIMKARVAAGWISEEDLPVEEADEADAEAVEEAVEEA
LAEDGEFDLAALEAEAERLGVDLETLINAGEDAETAEEDETK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggccatcggggtcagcgccaacaggctggaacttctgcagattgcccgcgcggttgcg
caggagaagatgattgacgagccgctggtgctcgccgccatcgaggaggcgatccagaaa
gccgcccgctcgcgctatggcagcgagctggacatacgctgctcgattcatcccaagacc
ggcgagatgaagctgacccgccacaccacggtggttgaggaagtcgagaacgactcccag
gaaatcagcctggaagaagctaagaagatcgacccgaatgccgagatcggcaccgtgttc
gaggaagagctgccgccgatcgagtttggccgggtcgcctcgcagaccgccaagcaggtc
atcacgcagaaagtgcgcgaagccgagcgcgagcgtcagtacgaagagtacaaggaccgt
atcggcgagatcatcaacggcatcgtcaagcgcgtcgaatacggcaatgccattatcgat
ctgggcaaggccgaaggcattatccgccgtaatgacgccatcccgcgcgaggccctgcag
cccaatgaccgcgtgcgcgcctatatctatgatgtgcgcaccgaggtgcgtggcccgcag
attttcctgtcgcgcgcgcatcccgatttcatggccgccctgttcgcgcaggaagtgccg
gaagtctatgagggtattatcgaaatcccgcgtgtggcgcgtgatccgggcagccgcgcg
aagatcgccgtcatttccaatgacagctctatcgaccctgtgggcgcgtgcgtcggtatg
cgcggcagccgcgtgcaggcagttgtcaacgagctggccggcgagaagatcgacatcatt
ccgtggaaccccgacccggcgaccttcatcgtcaacgcgctgcagccggcagaagtcgcc
aaggtggtgctggatgaggaaaaccagcgcatcgaagtggtggtgcctgatgaccagctg
tcgctggccattggccggcggggccagaatgtgcgccttgccagccagctgaccggctgg
tccatcgatatcctgaccgaggttgaagagagcgagcgccgccagaaagagtttgccgag
cgcacggcgatcttcatggaagcccttgatgtggacgaggtcattgcccagcttctggcc
acagagggcttcaccgatgtggaagacctcgcctttgtcgagctggacgaaattgccgtc
atcgaaggctttgatgacgagacggccgaggaaatccagacccgcgcgcgcgaatatctc
gacaagcaggccgccgagcaggatgcccgccgcaaggagctgggcgtcgaggacgatgtc
cttgccattgaaggcgtcaccttgccgatggcggtgaagttcggcgagaacgaggtgttc
acggtcgacgatctggccggcatgacgccggacgatctgcgcggctggtatgagacccgt
gatggtgagcgtgtgcgcgagccgggcattcttgacgggttcgatatcgatgcggctgag
gccgagcgcatgattatgaaggcacgcgtcgcggccgggtggatttccgaagaggatctg
ccggttgaagaggctgacgaagctgatgcggaggctgtcgaggaagccgtcgaggaggcg
ctggccgaggatggcgagtttgaccttgccgcgcttgaggccgaagcggaacgtctgggt
gtggaccttgaaaccctcatcaatgccggtgaggacgctgagacggcggaggaagacgag
acaaagtga
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