KEGG   Glycocaulis abyssi: AB6B38_11190
Entry
AB6B38_11190      CDS       T10778                                 
Name
(GenBank) RNA polymerase factor sigma-32
  KO
K03089  RNA polymerase sigma-32 factor
Organism
gaby  Glycocaulis abyssi
Brite
KEGG Orthology (KO) [BR:gaby00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gaby03021]
    AB6B38_11190
Transcription machinery [BR:gaby03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AB6B38_11190
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2 KORA UCR_14kD Sigma70_r4_2
Other DBs
NCBI-ProteinID: XER16787
LinkDB
Position
2301672..2302565
AA seq 297 aa
MSSQSSARRTADPDRQFLKTAMAVPLLEREEELALATAWREDGDEQALHTLTTAYMRLVI
AMAARFRQYGLPFADLVQEGNIGLMQAAARFEPERGLRFSTYASWWIRSSIQDYVLRNWS
IVRTGTTAAQKSLFFNLRRLRALISDVGGSAMTPENRAYVAEALKVGEDDVDAMAARLAA
VDRSLNAPLAEEGEGEWQDLLADDRPDPETAVMESRDTATRHQWISEAMNRLSERERHII
TKRRLIEDSVTLEQLGGELGISKERVRQIEHQALMKMKKSLIEIAGDPEEAGLIPAL
NT seq 894 nt   +upstreamnt  +downstreamnt
atgtccagccagtcttccgcccgccgcactgccgatcccgaccgccagtttttgaaaaca
gccatggccgtgccgctgctggaacgcgaggaagagttggcccttgccaccgcctggcgc
gaagacggcgacgaacaggccctgcacacgctcaccaccgcctatatgcgcctcgtcatc
gccatggcggcgcgctttcgccagtacggcctgcctttcgctgatctggtgcaggagggc
aatatcggcctgatgcaggccgccgcccggttcgagccggagcggggcttgcgcttttcc
acctatgccagctggtggatacgttcctcgatccaggattatgtcctgcgcaactggtcc
atcgtgcgcaccggcaccacggcggcgcaaaaatcgctcttcttcaatctgcgccgcctg
cgcgccctcatcagcgatgtcggcggcagcgccatgacgcctgaaaaccgggcctatgtc
gccgaagcgttgaaagttggcgaggatgatgtcgatgcgatggccgcaagactggcggcg
gtcgaccgctcgctgaacgcgcccctcgcagaagagggtgagggcgagtggcaggatttg
ctggctgatgaccggcctgacccggaaacagccgtgatggaaagccgtgatacggccacc
cgccatcaatggatcagtgaggcaatgaacaggctgagcgagcgcgagcgccacatcatc
acaaagcgccgcctcatcgaggacagcgtcacgctcgaacagctcggcggggagctcggc
atctccaaggaacgcgtccgccagatcgagcatcaggccctgatgaagatgaaaaagtct
ctgatcgagattgcgggcgacccggaagaggccggtctcatccctgccctctag

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