Glycocaulis abyssi: AB6B38_11290
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Entry
AB6B38_11290 CDS
T10778
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gaby Glycocaulis abyssi
Pathway
gaby03030
DNA replication
gaby03430
Mismatch repair
gaby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB6B38_11290 (dnaQ)
03430 Mismatch repair
AB6B38_11290 (dnaQ)
03440 Homologous recombination
AB6B38_11290 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaby03032
]
AB6B38_11290 (dnaQ)
03400 DNA repair and recombination proteins [BR:
gaby03400
]
AB6B38_11290 (dnaQ)
Enzymes [BR:
gaby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB6B38_11290 (dnaQ)
DNA replication proteins [BR:
gaby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB6B38_11290 (dnaQ)
DNA repair and recombination proteins [BR:
gaby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB6B38_11290 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
XER16804
LinkDB
All DBs
Position
complement(2318639..2319325)
Genome browser
AA seq
228 aa
AA seq
DB search
MREIIFDTETTGLYPLEGDRVTELGCVEVINMIPTGREFHALINPDRDIPAEVTAITGHT
REMLRDKPRFEEVAQDFIAFVGDAVMVAHNAPFDRGFINMELTRAGLDPYPDSRFKDTAA
MARERFPGSPANLDALCKRFDISLESRTKHGALIDAYLLAEVYLELNGGRTRALDFAGLE
GTDRTVRYAPRPPRPTPLQPSSTPEERALHAGFVAEMGEARVWKKFGV
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatcatattcgatacagagacgaccgggctctacccgctcgagggcgaccgg
gtgaccgagctgggctgtgtcgaggtgatcaacatgatcccgacggggcgcgagtttcac
gccctcatcaatccagaccgcgatatcccggcagaagtaacagccattaccgggcatacg
cgcgaaatgctgcgcgacaagccgcgctttgaagaggtggcgcaggatttcatcgccttt
gtcggggatgcggtgatggtggcgcacaatgcgccctttgaccggggcttcatcaatatg
gagctgacgcgcgccgggctggacccttatcccgacagccggttcaaggatacggccgcg
atggcgcgcgagcgctttccaggctcgccggccaatctggatgcgctgtgcaaacgcttt
gatatctcgctggaaagccgcaccaagcatggcgcgctgatcgatgcctatctgctggca
gaagtgtatctggagcttaatggcgggcgcacgcgcgcgctggactttgccgggctggaa
ggcacggaccgcacggtgcgttatgctccgcgcccgccgcgcccaacccccttgcagcct
tcaagcacgcccgaagagcgcgccctccatgcaggctttgtggccgagatgggcgaggcg
cgcgtctggaaaaagttcggcgtctga
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