Glycocaulis abyssi: AB6B38_11475
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Entry
AB6B38_11475 CDS
T10778
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
gaby Glycocaulis abyssi
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaby03400
]
AB6B38_11475
DNA repair and recombination proteins [BR:
gaby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
AB6B38_11475
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
XER16838
LinkDB
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Position
complement(2355050..2355505)
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AA seq
151 aa
AA seq
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MADIVSREKRSQMMAGIKGRDTRPEMLVRRALHARGYRFRLHRKDLPGKPDIVLPKYRVA
IFVHGCFWHGHDCHLFKWPKTREEFWREKIGRNRERDAEAIVALQLDGWRTFVCWECALR
QQGNLSNQLAVLEDFFQSKRSNGEIGSRCAS
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggctgatatcgtctctcgcgaaaaacgcagccagatgatggctggtatcaagggcagg
gatacccggcccgaaatgctggtccggcgcgcgctgcatgcacgcggataccgtttccgg
cttcaccgcaaggatctaccggggaagccagatatcgtcctgcccaaataccgggttgcc
atcttcgtgcatggctgcttctggcacggccatgactgccatctgttcaaatggcccaag
acacgggaagaattctggcgggagaagatcgggcggaaccgggagcgggacgcggaggct
atagtcgcccttcagttggacggttggcgaaccttcgtctgctgggaatgcgctctacga
caacaaggcaatctttccaaccagttggctgtgctggaagacttttttcaatcaaaacgg
tctaacggagaaatcggttctcgttgtgccagttaa
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