Glycocaulis abyssi: AB6B38_12400
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Entry
AB6B38_12400 CDS
T10778
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
gaby Glycocaulis abyssi
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gaby02000
]
AB6B38_12400
Transporters [BR:
gaby02000
]
Other transporters
Pores ion channels [TC:
1
]
AB6B38_12400
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
XER17015
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All DBs
Position
2561454..2563670
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AA seq
738 aa
AA seq
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MIRKSLRAGLLGTAAMAMCAPALAFEDASQEGSQPVATSQVRDVIIITAQKREEAITDIP
VSISVVSGERLVNSGAGSLVDFAAYVPGVNVGSGGSPGQTSITLRGIAPIGAGATVSTHI
DNSPLGGSSNYSRSPAFALDLFPNDIERVEILRGPQGTLYGASAMGGLLRYVTRTPDPSG
FSVQMAGEMFSLADASSLGYGARGRVNVPLADNAAFSASLFTRETPGYVDNTFTGENDQN
ELTQTGGRVALFLEPASNFTINLSAMFQDIDSANNGQVYLDPVTLETIDGPRTTRNIIAE
PFAKRERYYAARLNWDLGFADFASITSFSNTQNRQDTDASRIFGTIFPLLTGGAVPEGLS
EFNLFLDLEKYTQEFRLTSAGDGRWQWLIGAFYTNEESENRQFVSATDMAGNIIPGLHPA
AVVSLPSSYEEYAVFGNASFDLTDRLTIGFGGRLARNEQDFAQISDGALVGGATNFTGES
SEDVFTYMLNATFDLTDQTMLYGRIASGYRPGGPNVALLGMPPQVDADRLVNYEVGVKSD
FWDGRALIEATAYWIEWEDIQLSSVIGGVGGLINGDTARSRGIEFQAVVAPTDGLRLGFN
AGLTDAELTADAPDLSGVDGDRLPGVPRYNYALTADYDWTLQNGWDARVGGGVRWVGDRN
VSYPASATYMVLDSYHSVDVNAEVSNGAWSLRGYVRNLTDEDVYVSGTRMTNALGAPVFV
MATLLQPRTVGLVLSVSR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggaaatcgcttcgcgcggggcttctgggcacggccgccatggccatgtgcgca
ccggcactcgcatttgaggacgcatcccaggaaggcagccagccggttgccacctcgcag
gtgcgtgacgtcatcatcatcaccgcgcagaagcgcgaggaagccatcaccgacattccg
gtgtcgatcagcgtggtctctggcgagcggctggtcaattccggtgcgggctcgctggtc
gattttgcggcctatgtgcccggcgtgaatgtcggcagcgggggcagcccgggccagaca
tcgatcacccttcgcgggatcgcccctatcggggccggggcgacggtcagcacgcacatc
gacaactcgccgctgggcggcagttcgaactactcgcgctcaccggcctttgcgctcgac
ctgttccccaacgatatcgagcgggtggaaatcctgcgcggtccgcaaggcacgctctac
ggcgccagtgccatgggcgggctgctgcgctatgtcacgcgcacacccgatccgtccgga
ttttccgtgcagatggctggcgagatgttctcactggctgatgccagctcgctgggctac
ggcgcgcgcgggcgggtgaatgtgccactcgctgacaatgccgcgttcagcgccagcctc
ttcacgcgtgaaacgccgggttatgtcgataacacctttaccggtgagaacgatcagaac
gagctgacccagaccggcgggcgcgttgcgctcttccttgagccggcgtccaatttcacc
atcaatctctcggcgatgttccaggacatcgactcggccaataacggtcaggtctatctc
gacccggtgacgctggagacgattgatggtccgcgtacgacccgcaacatcatcgccgag
ccgtttgcgaagcgtgagcgctactacgccgcgcggctgaactgggatctcggctttgca
gacttcgcctcgatcaccagcttctcgaacacccagaaccgtcaggacacggacgcttca
cggatttttggtaccattttcccgcttctgacgggcggcgcggtgcctgaagggctgtcc
gagttcaacctgttcctcgatcttgagaagtatacgcaggaattccgcctcacatcggct
ggcgacggccgttggcaatggctgatcggcgcgttctacaccaacgaggaaagcgaaaac
cggcaatttgtgtccgccaccgacatggcaggcaacatcattcccggactgcaccccgca
gccgtggtcagccttccctcttcctatgaagagtatgcggtgttcggaaacgccagcttt
gatctgaccgaccgactgacgatcgggttcggggggcggctggcgcgtaacgagcaggat
tttgcgcagatatcagacggtgccctggtgggcggtgccaccaacttcaccggtgaatcg
tccgaagacgtcttcacctacatgctcaatgcaacgttcgacctgaccgaccagaccatg
ctctatggccggatcgccagcggctaccggccgggtggtcccaacgtggctctgctgggc
atgcccccacaggtcgatgctgaccggctggtgaactatgaggtcggggtgaagtccgac
ttctgggacgggcgtgcgctcatcgaagccacagcctactggatcgagtgggaagatatt
cagctgtccagcgttatcggcggcgtcggcggccttatcaatggcgacaccgcccgcagc
cgcggcatcgagttccaggcagtggtcgcaccgaccgacgggcttcgccttggtttcaat
gctggtcttaccgatgccgagctgacagcagacgcgcctgacctgtccggcgttgatggc
gaccgtctgcccggcgtgccccgctacaactacgcgctgacggcggactatgactggacg
ttgcagaacggctgggatgcgcgcgttggcggcggcgtccgctgggtcggagaccgcaat
gtctcctaccccgcgagcgcgacctatatggtgctcgacagctaccactccgtggatgtc
aacgcggaagtctccaacggcgcctggtcgctgcgcggttatgtgcgcaatctgaccgac
gaggacgtgtatgtcagcggcacgcgtatgaccaatgcgctgggcgctccggtgttcgtc
atggctacattgctccagccgcgtacagtcggccttgtgctgagtgtcagccgctag
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