Glycocaulis abyssi: AB6B38_13360
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Entry
AB6B38_13360 CDS
T10778
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gaby Glycocaulis abyssi
Pathway
gaby03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB6B38_13360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaby03019
]
AB6B38_13360
Enzymes [BR:
gaby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AB6B38_13360
Messenger RNA biogenesis [BR:
gaby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AB6B38_13360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Tankyrase_bdg_C
Motif
Other DBs
NCBI-ProteinID:
XER17198
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All DBs
Position
2752299..2753543
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AA seq
414 aa
AA seq
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MGRMADRLRPEDHPWLTDPAGLAVMDALLAAAPDGARYVGGCVRNALIGAPVSDTDIATV
LTPGETMAALEAAGIRAVPTGFEHGTVTAVSGGRGFEVTSLRKDVATDGRRAVVAFSTDW
NEDASRRDFRLNAIYAGRDGALFDPAGGIDDALAGRVRFIGEPAARIEEDYLRILRFYRF
HAWYARTPLDAEGHAACTALRAGLRQLSAERVWMELKKLLAAPDPRAALEAMQEGNVLNE
VLPDSIDFNLFLSIHSLETQESRPVDPLLRVAAFLAGGDAMRVDALCDTMKVSNAERTRL
VAAARRVGVHPGMDRMALRAALYEQGRRAVEDQLMLAAARGEGRRDALSRDLDAVSRWQR
PAFPLKAADLLAAGFEPGPALGRLMKQLEARWVEADFVLNRADLLAIARKEGGV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcatggctgaccggctaaggccggaagatcacccttggctgaccgatccggcc
gggctggcggtcatggatgccctgctggcggccgctccggacggcgcgcgctatgtcggc
gggtgtgtgcgcaacgcgctgatcggcgcgccggtgagcgataccgatatcgcgacagtg
ttgacgccgggcgaaaccatggccgcgctggaggctgcaggtatccgggctgttccgacg
ggtttcgagcacgggacggttaccgcggtgtccggcgggcggggctttgaggtcaccagc
ctgcgcaaggatgtcgccactgatggccgccgcgcggtcgttgctttctcgaccgactgg
aacgaggatgcgagccggcgcgatttccgtctgaatgccatctatgccggccgtgacggc
gcgcttttcgatcctgctggcgggattgacgatgcgcttgcggggcgtgtccgctttatc
ggtgaacccgcggcacgtatcgaagaagactatctgcggatattgcgcttttaccgcttc
cacgcctggtatgcgcgcacgcctctcgatgcggaaggtcatgcggcgtgcactgccttg
cgggccggattgcgccagctgtctgccgaacgggtgtggatggagctgaagaaattgctg
gctgcgcccgacccgcgcgcggctctcgaagcgatgcaggaaggcaacgttcttaacgaa
gtgttaccggattctatcgacttcaaccttttcttaagcatacactcccttgagacgcag
gaatcccgtccggtcgatccgttactgagggtggcggcgttcctggcggggggagacgct
atgagggtagacgcgctctgcgacaccatgaaggtgtcaaacgctgaacggacgcggctc
gtcgctgccgcccggcgcgtgggcgtgcaccctggcatggaccgtatggcgctgcgtgct
gccctctatgagcagggacgccgggcggtggaggatcagctcatgctggcggctgcgcgc
ggtgagggccgccgtgatgcgctctcacgcgatctcgatgccgtgagccgctggcagcgc
ccggcctttccgctcaaagccgccgatcttcttgcggcagggtttgagcccggccctgcg
cttggccggctgatgaaacagctggaagcgcgctgggtcgaagccgatttcgtgctcaac
cgggcagacctgctggccatagcgcgcaaggaggggggtgtctga
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