Geoglobus acetivorans: GACE_0199
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Entry
GACE_0199 CDS
T03507
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
gac
Geoglobus acetivorans
Pathway
gac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GACE_0199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gac03019
]
GACE_0199
Messenger RNA biogenesis [BR:
gac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GACE_0199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
AIY89256
UniProt:
A0A0A7GE64
LinkDB
All DBs
Position
complement(161364..162902)
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AA seq
512 aa
AA seq
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MRITVYDGAETIGGNKIYVEENGKGVFLDFGMNFAKYGKYFAEFLNERSVRGIHDLLYLN
LIPRLNIYRSDLIPSDVNMSDYPKLSVEAVLLSHAHVDHCGNIALLDESIPIMASPMSMA
MLKAMRDVSSSGIGSEVAYFNVREHMEDDRRILITDRSKPYKGRDLICTDRIPDELAEFM
CYRPGQEGRNAKKLNPGNLCHVHDHGLSFDIDAYEVDHSIYGATAYILWGDSAIAYTGDI
RMHGKYADKSREFVRGAKDASVLIIEGTRTGRDEDVNESEEIVFENCLKAVEESKGVVIA
DFSPRNFERLETFMEIARRTSRELVVTAKDAYMLHAMECADGICRMEDVRIYHELKQKKD
KWEELVVRERWGDKYVDPADISRNPENYILCFSFYDMKHLLDIKPDGGTYIYSSSEAFSE
EQEFDFLRLYNWLREFNLRVYGFKMVLKDGKLAPEFVRGYHASGHASKDDLRWIIEQVDP
DVIIPVHTTNPEWFVENFYNVKVFKNEDNVEV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagaataactgtttacgatggtgctgaaacaatcggcggaaacaagatctacgttgaa
gaaaacggcaagggagttttcctggacttcggcatgaactttgcgaaatacgggaaatac
tttgctgaatttctgaacgagagaagtgtgagaggcattcacgatctcctttacctcaat
ctgatacccaggcttaacatctaccgttcagatttgataccttcagatgtcaatatgtcg
gattatcccaagctcagtgtcgaggcggttcttttgagccacgcccatgttgatcactgc
ggtaacatagctctgctcgatgaaagcattccaatcatggcttccccaatgagcatggca
atgctgaaggccatgagagatgtttcgtcttccgggataggctctgaggttgcgtatttc
aatgtcagagaacacatggaagatgatagaagaatactcattacagacaggtcaaagccc
tataagggcagggacctcatatgcactgacagaatacctgacgagcttgctgagtttatg
tgctacagacccgggcaggaaggcaggaatgcaaagaagctcaatccaggaaacctctgc
catgtacatgatcacggcctttcctttgacattgatgcttacgaagtagaccactcaatt
tacggggctacggcatacatactgtggggcgattcagccatagcttacaccggcgacatc
agaatgcatggcaaatatgcggataaatcgagggagtttgttagaggggcgaaggatgca
tcagttctgatcattgaaggaacgaggacaggcagggatgaggatgttaatgagtctgaa
gagatcgtctttgagaactgcctgaaggctgttgaagagtcgaagggagttgtcattgca
gacttctcaccaagaaattttgagaggcttgagaccttcatggagattgcgaggagaacc
tcgagggagcttgttgtaacagccaaggacgcctacatgctccatgcgatggaatgcgct
gatgggatctgcaggatggaggatgtaagaatttaccatgagctgaagcagaagaaggac
aagtgggaggagcttgttgtcagggaaaggtggggagataagtacgttgatcccgcggat
atttcaagaaatcctgagaactacatactctgcttttcattctacgacatgaagcacctg
ctcgacataaagccggatggcgggacgtacatatattcttcaagtgaggcattcagcgag
gagcaggagtttgactttctcaggctgtacaactggctgagagagttcaatctgcgggtt
tacggcttcaagatggtgctgaaagacgggaaacttgcccctgagttcgtcaggggctac
catgcctcagggcatgcgtcgaaggacgacttgaggtggatcatcgagcaggttgatccg
gatgtgatcattccggtgcatactacgaaccctgagtggtttgtggagaatttttataat
gttaaagtgtttaagaacgaagataatgtggaggtataa
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