Geoglobus acetivorans: GACE_1315
Help
Entry
GACE_1315 CDS
T03507
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
gac
Geoglobus acetivorans
Brite
KEGG Orthology (KO) [BR:
gac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gac03016
]
GACE_1315
Enzymes [BR:
gac01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
GACE_1315
Transfer RNA biogenesis [BR:
gac03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
GACE_1315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
AIY90356
UniProt:
A0A0A7GHH2
LinkDB
All DBs
Position
1093886..1094788
Genome browser
AA seq
300 aa
AA seq
DB search
MKGLLRGENIIVEKAQKLISRNFGTAEGNSVILTPEEAAYLVYKGTLEVFSDDEHIVDFD
RLFKLCNPVKYFVFQDLRDRGIRVRFLDFGDYFPASEKDCFSVEELKRMCGKKLAIVDEE
ADVTYFKIETFDGRGNHYEELKKFSSRFSGGYFITENTELYRRYFYGVLRGNRVIMSIYE
GLYLMETGIMEADVEKKEVLELARKTIPDFEKIFTVYRDLRERKFMVKTGFKFGSEFRVY
EQVKNVSELRHSKYLVKLRSSFNLRELAGDVRLSGAVNKTLIYPILGKSPEYIAVRRVRI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaagggattgcttagaggagaaaatatcatcgtcgaaaaagcccagaaattgatttca
agaaattttggaactgctgagggtaattccgtaatcctcactccagaagaggctgcatac
ctcgtgtataaaggaacacttgaagttttttccgatgacgaacacattgtggattttgac
cggcttttcaagctgtgtaaccctgtaaaatacttcgtattccaggatttgagagacaga
ggtatcagagtccgttttcttgattttggagactactttccagcaagtgagaaggattgc
ttttcagttgaagagctaaaaagaatgtgtggaaaaaagcttgctattgttgatgaggag
gcggacgttacctatttcaaaattgagacgtttgacgggcgtgggaaccattacgaagag
ctgaaaaaattcagttcaaggttttccgggggttacttcatcacggaaaacacggagctg
tacaggagatacttttacggggttctcagaggaaacagggtgataatgtcaatatatgag
gggctttatctaatggaaacaggcataatggaggcagatgtcgaaaaaaaagaggtgctg
gaattagccagaaaaaccataccggatttcgagaaaattttcacagtgtacagagatctg
agggaaagaaaattcatggtgaagaccggcttcaaattcggcagtgaattcagagtgtat
gaacaggtcaagaacgtttccgagctaagacattcaaaatacctggtaaagctgaggagc
agcttcaatctcagggagctggcaggagatgtcagactttcaggtgcagtcaataaaaca
ctcatatacccgatactcggcaagagccccgaatacatcgcagtaaggagggtcagaatt
tga
DBGET
integrated database retrieval system
