Gymnodraco acuticeps: 117532461
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Entry
117532461 CDS
T09661
Name
(RefSeq) LOW QUALITY PROTEIN: stabilin-2-like
KO
K19013
stabilin-2
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117532461
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gacu00536
]
117532461
Glycosaminoglycan binding proteins [BR:
gacu00536
]
Hyaluronan
Cell surface receptors
117532461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fasciclin
wnt
EGF_3
EGF_STAB1-2
cEGF
EGF_MSP1_1
EGF_Teneurin
EGF
EGF_TEN
EGF_CA
FXa_inhibition
EGF_DL_JAG
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
117532461
NCBI-ProteinID:
XP_034051701
UniProt:
A0A6P8SNC9
LinkDB
All DBs
Position
Unknown
AA seq
1776 aa
AA seq
DB search
MRGQDMETRSCGVRNTWTLTQITWTRIPWTRILWTLLLASVSPPGGTASWVSLGVSFLGS
PERPSCSAPPLSPRQRDLCRKQPLVMPSVQEGARLAVSECQSQFRHERWNCSVRKEPPVF
GREMTSGSKETAFLQAVLAAALVHAVTRACSQGNMTECGCDARLRGGGALQGDVSLQGGG
SPQGGGSPQEGWHWGGCSDHIQYGIWFSRRFIDGTVRNTTSVRGGFTLSSAYIHNSEAGR
QNLCSNTTVLRASTPCKSCSLSFLFSVCPPGFRKTPRSPRQDCTFSVKTASMTLPMPGCS
SECYKEVDLKTCCPGFWGPDCQECPEGAERPCSLRGVCSDGMGGNGTCTCQPGFAGTACE
DCSTRRFGSTCSSVCSCVHGVCASGLTGDGRCTCFSGYKGPRCDQELPECVSLRCPLNSR
CMEEALTARLVCQCLPGYQKSGDTCLSVNPCRTQVCALQASCVPTGPGTHLCACNEGFSG
DGRVCMAVDPCQRNQGGCSAETTSCVYDGPGKSHCECLPGFVLQRDGSCSLKDACSPASC
HQEATCRTSDAGQVQCTCKQGFVGNGKVCYGNIMQRLSDLNTEPRGQWRGQLSSAISLLG
SLSWSLQNLGPFTLFVPINKGFRGVSVRTLTADRSKAQYLSKMHLVAGVLPFDSLKRTDV
FYTVTGKMGEMDTSEGDLQTKIRLHGSRKKAVILQSDVVASNGMIHIINKLMDSVAPTVE
SNPQENLLKIVSDYGKFDMFKSLLEKVSLASVLDLPGPMTVFAPSSAAFSAMPEGQLDWL
SSTEGRWKLLELMRNHIVPSSGLDVFNAVSGPRLASLASQILTINVTDNGQILVDGAAVL
EAAVEGKNGRLYVLEGVLTPASIRPVLPHRCDLNETRATKGECVSCSNVHLSQCEGGVQT
GLSTFGCMYLRSIEGSLSMGVSLGCKPTCNTTVTTRACCKGFYGLDCTSCPGGFQTPCSG
HGQCVEGISGNGSCLCEQSFGGSRCQFCSSSSRFGSTCDRTCPCVHGQCENRPDSDGRCK
PDSCQPGFTGRFCERRTAPCGLQVHFCHAHADCDFTQGAFRCVCKPGYQGDGITCVEADP
CAPPLRGGCSVNAKCVRSAPGAHSCQCLNGWRRDGDDCQPINNCQAPEGGGCHPNASCIY
VGPGQSDCSCKPGYRGSGSDCEAVNQCVSQRGGCHHLATCQLLSSQWTCVCDDGYSGDGH
VCYGTVFQALMTLPDVSEFSTWTTDSGVSWSLSDQNLTLLVPSSAAVSKMSSEDRSFWTL
KGNLPSLLRNHMIPGNFPLSSLSSASSLTSLLKTSLPVSTTNQVQFSVGGATITTADIAA
TNGLIHVIDQVLVPARKLSEGLLETLALRPEFSLFRSYLIDYNLTEEIEQADEFTVFAPT
DAAVTDYLTKMAATALDVNTTRYHVVLSERLLRTELQPGGFRASMLGESFQLRFSPREGK
LFVNEAQLDSSNLLSSNGVIHGVSAVMIINRNRCDDASFTRSPGSCVDCLFPQGKICPNA
TRPDPSMRSRKCMFTRMFEGERLLTIGCRATCLQENRVRRCCSGFFGPHCESCPGPAGRS
CSSNGFCSDGASGAGNCSCNPGFRGTACETCSAGKYGVHCDQECVCVHGRCSEGLQGDGS
CECDVGWRGVLCDQKIESSAEDLCGALKCHTSANCVIRSSSPQCLCAAGFTGNGTSCSAV
DVCVQGNGGCSVLAVCKRTLPGQRECVCTAGHTGDGLVCVEINPCLQGNGGCHSDAECFH
AGPNKTSCVCSKGFKGDGQTCEMINLCKKRNGGCHQ
NT seq
5329 nt
NT seq
+upstream
nt +downstream
nt
atgagaggacaggacatggagactcggagctgtggagtccggaacacctggaccctgacc
cagatcacctggacccggatcccctggacccggattctctggaccctgctgctggcctcc
gtgagtccgccgggcggcaccgcctcctgggtgtctctgggtgtctccttcctgggttct
ccggagaggcccagctgctccgcccccccgctgagcccccggcagcgggacctctgcagg
aagcagccgctggtcatgcccagcgttcaggaaggagcccgactcgccgtctcagagtgc
cagagccagtttagacacgagcgctggaactgctccgtccgcaaagagcccccggtgttt
gggcgcgagatgaccagcggatccaaagagacggcgttcctgcaggcagttctggcagcg
gctctggtccacgccgtgacccgggcctgcagtcagggcaacatgacggagtgcggctgc
gacgcgcggctgcgaggaggcggagctctgcagggggacgtgtctctgcagggaggcggg
tctccacaggggggtgggtctccgcaggagggctggcactggggtggctgctcggaccac
atccagtacgggatctggttcagccgcaggttcatcgacgggaccgtgagaaacacgacg
agcgtcagaggaggattcacgctgagcagcgcctacatccacaacagtgaggcggggcgg
cagaacctgtgctctaacaccacggttctgagggcctcgaccccctgtaagtcctgcagc
ctcagctttttgttctccgtgtgcccccccggcttcaggaagaccccccggtcccccaga
caggactgcacgttctctgtaaagacggcctccatgacgctgcccatgccaggatgctcc
tcagagtgctataaggaggtggatctgaagacctgctgccccggcttctgggggcccgac
tgccaggagtgtccggagggggcagagagaccctgcagtctgaggggagtctgctccgac
gggatggggggcaacggcacctgcacctgtcagccgggctttgcagggacagcttgtgag
gactgctctacgagacgcttcgggtccacctgcagctcagtgtgttcctgtgtgcacggt
gtgtgtgcctctggtctgacaggtgacggtcgctgcacctgcttctccggatataaaggg
cccagatgtgatcaagagctacctgagtgtgtgtccctgcgctgtcctctgaactctcgc
tgcatggaggaggctctgactgctcggctggtctgtcagtgtttacctggataccagaag
tccggggacacctgtctctccgtgaacccctgccggacgcaggtgtgcgccctgcaggcg
tcctgcgtccccaccgggccgggcacgcacctgtgcgcctgtaacgagggcttcagtgga
gacgggagggtctgcatggctgtggacccctgccagaggaaccagggggggtgcagcgcc
gagaccacgagctgcgtctacgacggcccggggaagtctcactgcgagtgtctcccgggg
tttgtcctccaaagggacggcagctgcagcctgaaggacgcctgcagtcccgcgtcctgc
caccaggaggcgacctgcagaacctcagatgcgggccaggtccagtgcacctgtaagcag
gggtttgtgggtaacgggaaggtgtgctacgggaacatcatgcagcgtctgagcgacctg
aacacggagccgcgggggcagtggaggggccagctgagcagcgccatatccctgctgggg
tctctctcctggtccctgcagaacctgggtccattcaccctgtttgtcccgatcaataaa
ggcttcaggggggtttcggtgcggactctgacggcggaccggtctaaggctcagtacctg
agcaagatgcacctggtggccggagtcctgcccttcgactcgctgaagagaaccgatgtc
ttctacaccgtgacgggaaagatgggggagatggacaccagcgagggggacctgcagacg
aagatccgtctccacggcagcaggaagaaggcggtgatccttcagtcggacgtggtggcg
tctaacgggatgatccacatcatcaacaagctgatggacagcgtggcgccgactgtggag
agcaaccctcaggagaacctgttgaagatcgtctctgactacgggaagttcgacatgttc
aagtccctgttagagaaagtgtctctggcctcggttctggacctgcccggtccgatgacc
gtcttcgccccgagcagcgccgccttcagcgccatgccggagggtcagctggactggctg
agcagcacagagggccggtggaagctgctggagctgatgaggaaccacatcgtcccgtcc
tccggcctggacgtgtttaacgccgtctccggcccgcgcctcgcctcgttggccagccag
atcctcaccatcaatgtgacagacaacggtcagattctggtggacggggccgccgtgctg
gaggcggcggtagagggtaagaacgggcgtctgtacgtcctggagggggtcctgacaccg
gcctccatccgacccgtcctgccccaccgctgcgacctcaacgagacccgggccaccaag
ggagagtgtgtgtcctgctctaatgtccatctgagtcagtgtgagggtggagttcaaacg
ggactatccaccttcggctgcatgtaccttcggagcatcgagggatcgttgagcatgggc
gtcagcttaggctgcaagccgacctgcaacaccaccgttaccactcgggcgtgttgtaaa
gggttctacggtctggactgcacttcctgtcccggaggattccagacaccctgttccgga
cacggccagtgtgtggaggggatctcagggaacggctcttgtctctgcgagcagagcttc
ggaggctctcgctgtcagttctgctcgtcctccagccggttcggatccacctgtgacaga
acctgtccctgtgtccacgggcagtgtgagaaccgtccagattcagacggacgctgtaaa
ccggactcgtgtcagccgggcttcaccgggcggttctgtgagagacggacagcaccgtgt
ggccttcaggttcacttctgtcacgctcacgcggactgcgacttcacccagggggcgttc
aggtgtgtttgtaaacctggttaccaaggtgacgggatcacctgtgtggaggcggacccg
tgcgccccccccctccgtggaggctgcagcgttaacgccaagtgtgtgcgcagcgctcct
ggagctcacagctgtcagtgtctgaacggctggaggcgggacggagacgactgtcagcca
atcaacaactgccaggcgcctgagggggggggctgccatcccaacgcctcctgcatctac
gtgggacctggacagagtgactgcagctgtaagccgggctacagaggcagtggcagcgac
tgtgaggcggtgaaccagtgcgtctcccagcgggggggctgccaccacctggcgacctgc
cagctgctgtcctctcagtggacatgtgtctgtgacgatggatactccggagacggacat
gtgtgttatgggaccgtcttccaggcgctgatgactctgccggatgtttctgagttctcc
acctggaccactgactctggtgtgtcctggtctctgtcggatcagaacctcacactcctg
gtcccgtcttcggctgccgtctctaagatgtcctcagaggacagaagcttctggaccctg
aagggcaatctgcccagcctcctcaggaatcacatgatcccggggaacttcccgttatcc
agcctgagcagcgcttcctctctgacctcgctcctcaagacatcacttcctgtttccacc
accaaccaggtgcagttttctgtgggaggagccaccatcaccacggctgacattgctgcc
accaatggactgatccacgtcatcgaccaggtcctggttcccgccaggaagctgagtgaa
ggtctgctggagacgctcgccctgcgtccggagttttctctctttagatcgtacctcatc
gactacaacctgacggaggagatcgagcaggcggacgagttcaccgtcttcgccccgaca
gacgccgctgtcacggattacctcaccaagatggccgccaccgctctggatgtgaatacg
acccggtaccacgtggttctgtctgagcgtctcctgaggaccgagctgcagcccggaggc
ttcagagcctccatgctgggagagagcttccagctgaggttcagccccagggaggggaag
ctgtttgttaacgaggcccagctagactcctctaacctcctgagctctaacggggtgatt
cacggcgtgtcggccgttatgatcatcaacaggaaccgctgcgacgacgcctccttcacc
agatcccccgggagctgcgtggactgcctgttccctcaggggaagatctgccccaacgcc
acgcgcccagacccgtcgatgcgcagcaggaagtgcatgttcacccgcatgttcgagggc
gagcggctgctgaccatcggctgcagagccacctgcctgcaggagaacagggtgcggcgc
tgctgctccgggttcttcgggcctcactgtgagtcctgcccgggtccagcgggtcggtcc
tgctcctctaacgggttctgctcggacggagccagcggcgccggaaactgcagctgcaac
ccgggcttcagaggcaccgcctgcgagacctgcagcgccgggaagtacggcgtgcactgc
gaccaggagtgtgtgtgtgtgcatggccgctgctctgagggtctgcagggagacggcagc
tgtgagtgtgacgtcggctggagaggagtcctctgtgaccagaagatagagtcgtcagct
gaggatctgtgtggagccctgaagtgtcacaccagcgccaactgtgtgatcagatcctcg
tcgcctcagtgcctctgcgctgccggattcacggggaacggcacttcctgttcagcggtg
gatgtgtgtgtgcagggtaacggcggctgcagtgtgttggcagtgtgtaagcgcacgctg
ccgggccaacgggagtgtgtgtgcacggccggacacaccggggacgggctcgtgtgtgtc
gaaataaacccgtgcctgcaggggaacggaggctgtcactccgacgcagaatgcttccac
gccgggcccaacaagacttcctgtgtctgcagtaaaggtttcaaaggggacggacaaacc
tgtgagatgatcaacctgtgcaaaaagaggaacgggggctgccaccagt
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