Gymnodraco acuticeps: 117533085
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Entry
117533085 CDS
T09661
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04020
Calcium signaling pathway
gacu04080
Neuroactive ligand-receptor interaction
gacu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117533085
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117533085
04082 Neuroactive ligand signaling
117533085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gacu04040
]
117533085
Ion channels [BR:
gacu04040
]
Ligand-gated channels
Glutamate (ionotropic)
117533085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
HAMP
DinB_2
Motif
Other DBs
NCBI-GeneID:
117533085
NCBI-ProteinID:
XP_034052607
UniProt:
A0A6P8SYN5
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
SQYFYFYSSLPVLPVPHSFLSNTSFTGLTGPVRVLQNQVLTDQRFHVWSLRRDAVGQPAW
VTVGRWEGGRLQVEEQGAWQGPRPPPRPEGGGARTQRTPWKPGLPVSGTRVRVVTLVEHP
FVFTRDVDEEGSCPAGQFCLNAGTNSSEVLERIFREVAGGNSSFLPAGFGRCCYGYCIDL
LEKLAEDLDFQFDLYVVGDGKYGAWKGGRWTGLVGDLMNGLADMAATSFSINSARSRVID
FTSPFFSTSLGILVRSKDTAAPMGAFMWPLHWSMWVGIFVALHITALFLTLYEWKSPYGM
TPHGRNRIRVFSYSSALNLCYAILFGRTVSSKPPKCWTSRFLMNLWAIFCLLVLSSYTAN
LAAVMVGEKTFEEVSGIHDAKLHHPSRGFRFGTVRESSAEDYMKKSFPEMHEYMRRFNEP
TTPEGVGNLKTDPPQLDAFIMDKALLDYEVSIDADCKLATVGKPFAIEGYGIGLPQNSPL
TSNISDVISRYKSEGFMDLLHDKWYKVVPCGNRVFAVTETLQMGISHFSGLFLMLCVGVG
GALLTLVGEHGFYQLVLPHIRRRQNLKYWLHTSQKIHRALNMTYEDVKRQRAEKEKSCNL
EKPTPPPGPPGPPGPPGVATRWNNEDAAAVANDARDFKRVHFHLETLNTRRLLARMAASD
AKSKPEGEGPAKPNTGPKCGPIFGQKTGPNTGPNSRLVANGGPAASLASLVLSRQSAART
NAPPPIVVAPPPVVVAPPRPGELQELQEEIEQMRERLRTALARRAEIQTTLTNPVAPETD
NLSTTTTTEAPPTTSPPTVTPPTVTIAPVMPLPANTKCVTTMTTPPHKVLSKVRPFQSRL
TNQRR
NT seq
2539 nt
NT seq
+upstream
nt +downstream
nt
atcccaatacttctacttttactcgtcactacctgttcttcctgtcccccacagcttcct
ctccaacacgtccttcaccggtctgacgggtccggtccgggtccttcagaaccaggtgct
cacggatcagcggttccacgtctggagcctccggagggatgcagtggggcagccggcctg
ggtgacggtgggacgctgggagggggggcgtctccaggtggaggagcagggcgcctggca
gggacccagacccccccccagacctgagggagggggcgccagaacacagagaaccccctg
gaaacccgggttaccagtatctggtaccagagtccgggtggtgacgctggtggagcatcc
cttcgtgttcacgcgggatgtggacgaggaggggagctgtccggcgggtcagttctgttt
gaacgcggggacaaacagctctgaggttctggagcggatcttcagggaggttgcaggagg
aaacagcagctttttacccgctggattcggacgatgctgctacggttactgcatcgactt
gttggagaaacttgcagaggatttggacttccagtttgacttgtatgtcgtcggagatgg
aaaatacggcgcgtggaaaggaggtcgctggacggggctggttggcgatttgatgaatgg
tttggcagatatggccgccacttcttttagcatcaactcagctcgtagtcgcgtcatcga
cttcacctcgcccttcttctccaccagcctgggcatcctggtgcgtagtaaagacacagc
ggcacccatgggggccttcatgtggcccttgcactggtccatgtgggtggggatcttcgt
ggcgctgcacatcacagcgctgttcctcacgctgtacgagtggaagagtccgtacgggat
gacgcctcacgggaggaacagaatcagagtgttctcgtactcgtcggcgctgaacctgtg
ctacgccatcctgttcggacgcaccgtgtcctccaagccgccgaagtgctggacgagtcg
attcctgatgaacctgtgggccatcttctgcctgctggtgctgtccagctacacggcgaa
cctggccgccgtcatggtgggagagaagaccttcgaggaggtgtcagggatccacgacgc
caagctgcaccacccgtctcgggggtttcgctttgggacggtgagggagagcagcgccga
ggattacatgaagaagagttttccagaaatgcacgagtacatgagacgcttcaacgagcc
gacgacgcctgagggggtcggcaatctcaagacagatcccccccagctcgatgccttcat
catggataaagctctgctggattacgaggtctccatcgacgccgactgtaaactggcaac
cgttgggaaaccattcgccatcgaaggttatggtatcggcctgccgcagaactcaccgtt
gacgtccaatatttccgacgtgatcagcagatacaagtctgagggttttatggatcttct
gcacgataaatggtacaaagtggttccctgtggaaaccgcgtgttcgccgtcaccgagac
gcttcagatgggcatcagccacttctcgggcctcttcctgatgctgtgtgtcggggtggg
gggggcgctgctcacgctggtcggggaacacgggttctaccagctggttctgcctcacat
ccggcgccggcagaacctcaagtactggctgcacacctcacagaaaatccaccgtgctct
gaacatgacgtatgaagacgtgaagcgtcagcgtgcagagaaagagaagagctgtaacct
ggagaagcccacgccccccccaggacccccaggacccccaggaccccccggtgttgcgac
caggtggaacaacgaggacgccgccgccgttgctaacgatgcgcgagacttcaaacgagt
ccacttccacctggagacgctcaacacccggcgcctcctcgcccgcatggccgcctccga
cgccaaatccaaacctgagggggaggggcctgccaaaccaaacacggggccaaaatgtgg
gccaatatttgggcaaaaaacggggccaaacacggggccaaacagcagacttgttgctaa
cggaggtccggcggcgtcgctagcaagtctggtgctctcccgacaatcagctgcccggac
taatgccccgccccctatcgttgtagctccgccccctgtagttgtagccccgccccgtcc
cggcgagctacaggagcttcaggaagagattgaacagatgcgtgaaaggctgagaacggc
tctcgctcgtcgggccgaaatccaaacaacgctgaccaaccctgttgccccggagacaga
caacctctcaacaacaacaacaacagaagccccacccacaacttccccacccactgtgac
tccgcccactgtcactatcgccccggtaatgccccttcccgccaacacgaagtgcgtgac
caccatgacgaccccccctcacaaagtcctgtccaaagtccggcccttccagagcagact
gaccaatcagaggaggtga
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