KEGG   Gymnodraco acuticeps: 117533379
Entry
117533379         CDS       T09661                                 
Name
(RefSeq) probable histone deacetylase 1-B
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
gacu  Gymnodraco acuticeps
Pathway
gacu03082  ATP-dependent chromatin remodeling
gacu03083  Polycomb repressive complex
gacu04110  Cell cycle
gacu04330  Notch signaling pathway
gacu04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:gacu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117533379
   03083 Polycomb repressive complex
    117533379
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    117533379
   04350 TGF-beta signaling pathway
    117533379
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    117533379
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gacu03036]
    117533379
Enzymes [BR:gacu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     117533379
Chromosome and associated proteins [BR:gacu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     117533379
   HDAC complexes
    Sin3A-HDAC complex
     117533379
    BRAF-HDAC complex
     117533379
    REST complex
     117533379
    SHIP complex
     117533379
    MiDAC complex
     117533379
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     117533379
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    117533379
  Chromatin remodeling factors
   NuRD complex
    117533379
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 117533379
NCBI-ProteinID: XP_034052972
UniProt: A0A6P8T034
LinkDB
Position
Unknown
AA seq 483 aa
MALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
GEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
ALKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FRPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKSFNLPLLMLGG
GGYTIRNVARCWTFETATALDCSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTTEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAPHPDSGDEEEGEDPEKRVSIRAHDKRIACEEE
FSDSEDEAEGPGGGRRNAANHKKVKRVKKEEEKDAEEKKEVKEEEKEEEKMDTSGPKEEV
KTT
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggcgctgtctcaaggaacaaagaaaaaagtttgctattactatgacggggatgtgggg
aactactactacgggcagggccatcccatgaaaccccacaggatccgcatgacacacaac
ctgctgctcaactatggactgtacaggaagatggagatctatagaccacacaaagccagt
ggcgaggagatgaccaaataccacagtgacgactacattaagttcctgcggtccatccgg
ccagacaacatgtctgagtacagcaagcagatgcagagattcaatgtcggagaggactgt
ccggtgttcgatgggctgtttgagttctgccagctctcgacgggtggatcggtcgctggg
gcgttgaagctgaacaagcagcagacagacatcgccatcaactgggcgggaggtctccat
cacgccaagaagtctgaggcgtctggtttctgctacgtcaacgacatcgtgctagccatc
ctcgagctgctcaagtaccaccagagggtgttgtatatagacatcgacatccaccacggc
gatggggtggaggaggccttctacaccacagacagggtcatgactgtctctttccacaag
tatggagagtacttccccggcactggagacctgagggacatcggagcgggaaagggaaag
tattacgcagtaaactacccgctcagagacggtattgacgacgagtcgtatgaagccatc
ttcagacctatcatggctaaagtgatggagatgtaccagccgagtgctgttgttctgcag
tgtggagctgactctctctctggagacagactgggctgcttcaacctcaccatcaaaggc
cacgccaaatgtgtggagtacatcaagagtttcaacctccccctgctgatgctggggggg
gggggctacaccatccgtaacgtggcgcgctgctggacgttcgagacggccaccgccctc
gactgctccatccccaacgagctgccctacaacgactacttcgagtacttcgggcccgac
ttcaagctgcacatcagcccgtccaacatgaccaaccagaacaccacggagtacctggag
aagatcaagcagcggctgtttgagaacctgcgcatgctgccccacgcccccggtgtccag
atgcaggcgatcccagaggacgcccctcacccagacagcggggacgaggaggagggggag
gaccccgagaaacgcgtctccatccgggcccacgacaagaggatcgcctgcgaggaggag
ttctccgactctgaggacgaggcggaagggccgggggggggccgcaggaacgcagccaat
cacaagaaggtgaagcgagtgaagaaggaggaggagaaggatgcagaggagaagaaagaa
gtgaaagaggaggagaaggaggaagagaagatggacacctcaggaccaaaagaagaagtg
aagacaacttga

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