Gymnodraco acuticeps: 117533465
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Entry
117533465 CDS
T09661
Symbol
cnot3a
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117533465 (cnot3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117533465 (cnot3a)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117533465 (cnot3a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117533465 (cnot3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
117533465
NCBI-ProteinID:
XP_034053122
UniProt:
A0A6P8T0T1
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGLWLTCTIDTLNMQVDQFESEIESLSVQTRKKKGDKDDRIEELKRMVERHRFHIRM
LETILRMLDNDSIVVDSILKIKDDVDYYIDSSQDPDFEENEFIYDDLDLDDIPLVATSPS
GQGPLDDEMFLQSCSTPTSTTSSSPIPPSPATCTAESSEDDKKRGRSTDSEVSQSPVKNG
TPSLLSSFSSSTTSGSSSSSSLVSMASVIGGIPTVLPSCSLIGSFSSAVQQHQPALQQQP
LPPNQPQQQQQQQPPQTKPSVPSNNTPSPPNHPLLPASPAPSLPTPTTPISSAPISQSQF
ISMPTPASSLGLGLSLGLSNIGLTGTSSVNQMSGLGLSGHHSPLNTMAGLISGSTPAPYA
QAASGGLGLSSITQSIMSAESSTSIPPSGSSGVTTNGAGLGLGLLGSSPAHNSLSASILS
LVPGQNIAPGASQLPPSSVSTTPGAVGMMGGIGGNVGVVGGVNAAPARPPSGLKQNGSTS
YSAVVAENSTESALSTPSQSQSSQSSSLSSSNSQPMDNGSSLISSITLPPSSPSPSFSDS
TPGGGSLLNGPHSYTQASEALKAPEPLSSLKAMAERAALGSGLDGEIPNLHLTERDIFSS
SSAAPGTPAAPQPSVSEVSIPPSLGVCPLGPTPLPKDQLYQQAMQESAWTHMPHPSDSER
IRQYLMRNPCPTLPFHHQIPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALKK
QSWRFHTKYMMWFQRHEEPKTITDEFEQVQNQQSSHVSFETFFKLGSAGIDKGTYIYFDY
EKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaacttcaaggtgagatcgacagatgtttgaaaaaagtagctgaa
ggtgtggaacagtttgaagacatctggcaaaagctccataatgcagccaatgcaaaccag
aaggaaaaatatgaggctgacctcaagaaagagattaaaaaactacagcgactgagagat
cagataaaaacatgggtggcctcaaacgagatcaaagacaaaaggcagctagtcgaaaac
cgcaaactaatagagacgcaaatggagcggttcaaggtggtggaacgtgaaacaaaaaca
aaagcctactctaaagaaggcttggggctcgctcagaaagtggatccagctcagagggaa
aaagaggaaacgggactgtggctaacatgtacgatagacactctaaatatgcaggtggat
cagtttgaaagtgagatagaatctctttcagttcagacaagaaaaaagaagggcgacaaa
gatgatcgcattgaggagctaaaacgaatggttgaaaggcatcgattccacattcgcatg
ttggagaccattttacgaatgctggacaatgactctatagtggtggattcaatcctgaag
atcaaggatgatgttgattactacatcgactcgtctcaggacccggactttgaggagaat
gagttcatctacgacgacttagacctggatgacatcccattagtggcaacttctccgtcg
ggtcaggggcctctggatgatgagatgttcttgcaatcctgcagcactcccacttccaca
acctcctcttcacccattcctccttccccggccacttgcactgctgagagctcagaggac
gataagaaaaggggacgctcgacagacagtgaagttagtcagtcgcctgtgaagaacggc
accccatccttgctatcttcattctcgtcctccacgacctcggggtcctcctcgtcctcc
tccctcgtgtccatggcgagtgttatcggaggcattcccacggttctacccagctgcagt
ctcatagggagcttcagcagtgcggtgcagcaacatcaacctgcactacagcagcagcct
ctgccaccaaaccaaccgcagcagcaacaacagcaacagccacctcagacaaaaccctct
gtcccctcaaacaacacccccagcccacccaaccaccccctcctcccagcctcacctgcc
ccctctctccccacgcccaccacacccatttcttcagctcccatttctcaatcacagttc
atatccatgcccaccccggcatccagtttgggactcgggctgagtctgggtttgagcaat
atcggcctgacggggaccagcagtgtcaaccaaatgtctggtttgggtcttagcggccac
cactcccccttaaacacaatggcagggctcatttcaggctccaccccagccccctacgct
caggcagcatcaggaggtttgggtttgagcagcatcactcagtccatcatgtcagcggag
agcagcacctccatccccccctctggctccagtggagtcaccacgaacggggcggggttg
gggctcggcttgcttggttccagcccggcccacaactctttgagtgcgagtattctgagt
ttggttcctgggcaaaatatagcccccggtgcctcgcagctgcccccgagttctgtcagc
acgacacccggagcagttggcatgatgggaggcattggagggaatgtcggcgtggttgga
ggcgtgaatgctgctcctgcacgaccaccaagtggcctgaagcaaaatggaagcacaagt
tacagtgctgtagtggcagagaactcgacagaatcagctctaagcacaccgagccagtca
caaagcagccagtcctcgtctctcagttcttcaaacagtcagccgatggacaacggctcc
agtttaatcagctccatcaccctgcctcccagctctccctctccctcgttctctgacagc
acacccggtggagggagtcttctcaacgggccccactcctacacacaggcctcggaggcc
ctcaaggcccccgagcctctcagctctctgaaggcgatggctgagagagcagcgctggga
tccggtctggatggagagatccccaacctgcacctaacagagagagatatcttctctagt
tcgtctgcggcgcccggcacacctgccgccccccagccgtccgtgtcggaagtcagtatt
cccccctcgctaggggtctgtcccctcggccctacccccctccccaaagaccagctctac
cagcaggccatgcaggagtcagcatggacgcacatgccccacccctcggactcggagagg
atcaggcaatacctgatgaggaatccgtgtcccacactacccttccaccatcagataccc
ccgcaccactctgactccattgagttttaccagagactgtccacagaaactctctttttc
atcttctactacctggagggcaccaaggctcagtatctgtctgccaaggctctgaagaaa
cagtcatggaggtttcacacaaaatacatgatgtggttccagaggcacgaggagcccaag
actatcactgatgagtttgaacaggtgcagaatcaacaaagttcacacgtttcttttgaa
accttttttaaattgggttctgcaggaatagacaagggcacttacatttactttgactat
gagaaatggggccagaggaagaaggagggattcaccttcgagtacaggtacctggaagac
agagacctgcagtga
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