Gymnodraco acuticeps: 117533619
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Entry
117533619 CDS
T09661
Symbol
tp53bp1
Name
(RefSeq) LOW QUALITY PROTEIN: TP53-binding protein 1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117533619 (tp53bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
RTT107_BRCT_5
Tudor_3
DUF4537
GYF
Motif
Other DBs
NCBI-GeneID:
117533619
NCBI-ProteinID:
XP_034053361
UniProt:
A0A6P8SSM8
LinkDB
All DBs
Position
Unknown
AA seq
1695 aa
AA seq
DB search
MDPSGSELDSSLPQPENPCLIVEDSQPDSVALEDDPESSYRALLARRLSSLQPTARSPVL
ELISSPLGSRCSQTDSQSESSQSNNQAESGIQIASIPSSAFQEESQVLNVCPPNKKKCAL
EDTDMDSGADSTTHCIQPEEGASQFGFLELSQSQDLRGEVVNRQVEDDRERRNTSAAEQN
ISSRTSQSQDNKAARSEVSSSWSESSGQSGRQRGIEALLHSEVLQASDEQEIPSSQEDMF
DPDKTGGAVDSTVSEPEQQGHPTATPAQTLRLLHLSGQGTLVQETLSQSSVDFVAATQDN
FSQNLLIVPSSPTEAENKHADEPMDTSLPPEDRAEPMETEAASKPHPSASTPVSQNSPGF
VLERTLSLPSQPEFSHDVFVPTQSQSQQQSDKKKASLPRQTQSQPLESAPFTLPLQLSVN
TQISSQAQKTSEHIEEDSQATQIEELKEPPCDSDSQQRRESNGMSSQSQTATSSKASPSA
ESPKHRACAKNEPSSQLQKSEVHKKTATSLNVQNVNVKDSKSDVVSCSQPKVDLSDVTVN
NCVQETPPADPTPCSFPSQSMISQTVDGVKGSVDSRKAGAKANSQPLKSLSQQSVAAGNS
QTVKDVMGESNKWEEEEEVMEGEEESTLGGEASGLGLALSQSQLLSPEPMEEESENRGED
SITVVTDSERDSQPLQAKTNSSQPTRGKVSCSTNGHESQTQGKKLLPAPDRLSQTERAGP
EAEGHKDKSLSDSSGEMSFHFTLPKEGELIGPVVSATPPLIGQLKQTLRHSTPIEITSFS
QKSGAVGDVSADGAMAASDIVSGESGDDTMEKGDGKLSLRMKLVTPVEEGSSERFSLQKP
ALSEEDGPVVKVTTVAKAVTSPSVFSRVRQVHRQQDAREESQGGGNSTPVRGDLFSSPQR
SSQASSLGCNSLPNSQSEPSQQDILAASQETRKGPAERSANRLGPHQAAEPPTPNRTEAR
QRAPSDSTVTSSPSNKIRQRTVSQQTSEAPGLRSPANRGEPESPSFRRTAAPAHRRHMRT
IQEVRTTVTRIITDVYYEDGKEVDRKVTEESEEPVVDCQVLDGDISPCRTGGSSMTSGDL
GDISSLSSKASSLLQHSSGGTSSSGFTRPDFLMPPSRGATSFSPRRGGGHQQRGHRGQRA
RSGVTMNRGLTPPFPRGRARRGRPPSRASMSRGGAVGSPQRLGAHGQAHSSSEEEPYTRM
LPPRLPASPADPELHSRSDSLRSSPEEAHSAGSSFVGLRVMAKWSSNGYFYSGLIIKDSG
EGSFRLRFDDGYECEVAGRDILLCDPIPLETEVTALLEDEYFSIGIVRGHKTEGPDLFYS
VEKDGQRQWHNRTSVILSLEQGNKLREQHSLGPYEPSTPLTKASDISLDNLMEGKRRRRA
GSEDHSTPNRSPRTPAXSGKRKLMTSEGIRSAAKRGRRGAGARAAQRVGVCNTSGSGTDL
PGQADDVADTHGPLPKNTTLFMGFAFMLTASSEIDRLTNKSASDNEDDYVETGPYNKAYT
ESQLQAGGGFVLPDFNEEQCKAAYQSLLIADQHCRTRKYLLCLASGVPSVSHIWVRDCCK
ENKLLNYRNYLLPAGAGPDEAVVEWHPRCSPFKALRVLLVFEKPVELWAQLITMGGGSSV
RHFQTDKDGSDIPAGKYDLVVSDSACPPLVEKNVTSQEVPLVSPEWIIQSVIRGERMGFH
SKPQYHHDYSSSSSS
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggatcccagcggaagtgaactggactccagtcttcctcagcctgagaacccgtgtctg
atcgtggaggactcccagccggacagtgttgctctggaggacgaccccgagagcagctac
cgagccctgctggcccgccgcctgtccagcctgcagcccaccgcccgcagcccggtgctg
gaactgatatcctccccgctaggaagccgatgctctcagactgacagccaatcagagagc
tcccagagtaacaaccaagccgaatcaggcatccaaattgcgtccatccccagttctgcg
ttccaggaggaaagccaagttctgaacgtttgccctccaaacaagaaaaagtgtgcactg
gaggacacagacatggattcaggagctgattctaccacacactgcattcagcctgaggag
ggagcttctcaatttggttttctggagctttctcagagtcaggatctgcgcggtgaagtg
gtgaaccgtcaggtggaagacgacagagagagacgcaacacatcagcagcagagcagaac
atcagctccaggacttcacagagtcaggacaacaaagcagcgagatctgaggtgagctcc
agctggtcagagtcctcgggtcagtcggggaggcagcggggcatcgaggctctgctgcac
tcagaggtcctgcaggcgtctgatgagcaggagatcccgtcctcacaggaggacatgttc
gaccctgacaagacgggcggtgcagtggacagcacggtgtctgagccggagcagcagggt
caccccacggccacaccggcccagaccctgcggctgctgcatctgtccggacagggaaca
ctggtgcaggagactctgtcccagagctctgttgactttgttgccgccacccaagacaac
ttctcccagaaccttttgatagttcccagttcaccaacagaagcagagaataaacacgct
gatgagccgatggacacttcactgccccccgaagaccgagccgagccaatggaaacagag
gccgcttctaagccacacccgtcggcctctactcctgtctcccagaattcccctggtttt
gtgttagagcgcactctctctttaccgtcccagccagagttttctcacgacgtgtttgtc
cctacacagagccagtcacaacagcagtcagataagaagaaagcctcgttgcctcgccag
acgcagtctcagcccctggagtcagctcctttcacgttgcctttgcagctctctgtgaac
acacagatcagcagccaggctcagaagacctcagaacatatagaggaggatagccaggca
acacaaatcgaggagctgaaggagccgccctgcgacagcgactcacaacagaggagagag
agtaacggtatgtcttcacagtcacaaactgccaccagctcaaaagcttccccctctgcc
gaatcaccaaagcatcgcgcatgtgccaagaacgagccgtccagtcagttgcaaaagtct
gaagtgcacaaaaagacagcgacttctttgaatgtacaaaatgtgaatgtaaaagacagt
aagagtgacgtggtgtcctgctcacaacccaaggtcgatctctctgatgtgacggttaac
aactgcgtgcaggagactccccccgcagaccctacaccttgcagttttccctcacagtct
atgatctctcagactgtggatggagtgaagggttctgtggactcgagaaaggcaggagca
aaagcaaacagtcagcctttaaaatcattgtcacagcagtcggtagcagctggcaacagt
caaacagtcaaagacgtgatgggggagagtaataagtgggaagaagaagaggaggtgatg
gagggggaagaagagagcacattgggaggcgaggcctctggactaggtctggctctctct
cagagtcagctgctgtctcctgagcccatggaggaggagagtgagaacagaggagaggac
agcatcaccgtggtcacagacagcgagagagactcccagcctcttcaggcaaagaccaac
agctcccagccaaccagaggcaaagtgtcctgctccaccaacggccatgagtcccagact
caggggaagaagctgctcccggctcctgataggctctcccagactgagagggcgggacct
gaagcagaggggcacaaagacaagagcctgagtgacagctctggagaaatgtccttccac
ttcactcttcctaaagaaggcgagctgataggtcctgttgtcagtgccacgcctcctctg
atcggccagctgaagcagacgctgagacacagcactcccattgagatcacttccttttct
caaaagtcaggcgcggtgggggatgtctctgcagacggggcgatggcagccagtgacatt
gtttcgggcgagagcggggatgacacgatggaaaagggagacgggaagctgagtttgagg
atgaagctggtgaccccggtggaggagggcagctcggagcgcttcagcctgcagaagccc
gccctatcagaggaggatggacctgtcgtcaaggttaccactgttgccaaggctgttacc
agcccgtcagtgttcagtcgtgtccggcaggttcacagacagcaggacgcaagagaggag
agccagggggggggcaacagcacacctgtcagaggagatctgttctcctcaccgcagagg
agctcccaggcctcctcgctgggatgcaacagcctccccaacagccaatcagaaccttca
caacaggacattttggcagcatcgcaggagacccgtaaaggtcctgcagagcgctctgca
aacaggctagggccgcatcaagctgcagagccccccacccccaacaggacagaggcccgg
cagagggccccctccgacagcaccgtcacctccagtccgtccaacaagatccgtcagagg
acagtctcccagcagacctccgaggctccggggctgcgctccccagccaacaggggtgag
cccgagtctccgtcctttagaagaaccgcagcccccgcacaccgcagacatatgcgcacc
atccaggaagtgcggaccaccgtcacacgcatcatcacagacgtgtattacgaggacggc
aaagaggtggaccgcaaagtcacagaggagagcgaggagccagtggtggactgccaggtg
ttggacggcgatatttccccgtgtcgcaccggcggcagctccatgacctccggtgacctc
ggggacatcagctctctgtcgtctaaagcctccagcctgctgcagcacagctccggagga
accagcagcagcggattcaccaggcccgacttcctcatgccgcccagccgaggggccacg
tccttcagtcccaggaggggaggcggtcatcaacagaggggtcacaggggtcaaagggca
aggtcaggggtcacaatgaacagaggcctcaccccaccgttccccagaggaagggctaga
aggggccggcccccatcccgtgcctcaatgtccagggggggtgctgtcggctccccgcag
aggctcggggctcacggccaggctcattcctcctcagaggaggagccctacacccgcatg
ctccccccgcgcctccccgccagccccgcagacccggagctccacagccgctccgactcc
ctcaggtcgtccccggaggaggcccactcggcagggagcagctttgtggggctgcgggtg
atggccaagtggtcgtccaacggatacttctactcaggcctcatcatcaaagactctgga
gagggcagcttccgcctgcgcttcgacgacggctacgagtgtgaggtggcagggagggac
atcctgctgtgtgaccccatccccctggagacggaggtcaccgccctgctggaggacgag
tacttcagcataggcattgtgcggggccataagaccgaggggccagacctgttctacagc
gtggagaaggacggtcagaggcagtggcacaacaggacctccgtcatcctgtctctggag
cagggcaacaagctgagggagcagcacagcctggggccctacgagccttccaccccgctg
accaaggcctccgacatcagcctggataacctgatggaggggaagaggcggcgcagagcg
ggctccgaggaccacagcacccccaaccgcagcccccgcaccccggccncctctgggaag
aggaagctgatgacctccgagggcatcaggtcggcggctaagaggggccgcaggggtgcc
ggagccagagctgctcagcgggtgggggtgtgtaacacctccggcagcggcacagatctc
cccggtcaggctgatgacgtggctgatactcacggccccctgcccaagaacaccaccctc
tttatgggtttcgccttcatgctgaccgcctcgtccgagatcgaccggctgaccaacaag
agcgccagcgacaatgaggacgattacgtggagacgggtccgtataacaaagcttacaca
gagtctcagctgcaggcgggggggggcttcgtcctgccagacttcaatgaagaacaatgt
aaggcagcctatcagagcctgctgattgcagaccagcactgccgcaccaggaagtacctg
ctgtgtttggccagcggtgtgccgagtgtgtcgcacatctgggtgagagactgctgcaaa
gagaacaagctgctcaactacaggaactacctgctgcccgccggagcggggcccgacgag
gccgtagtggagtggcatccgcgctgcagcccgttcaaagccctgcgggtccttctggtg
tttgagaagccggtggagctttgggcgcagctgatcaccatgggtggaggttcgtctgtc
cgacacttccagacggacaaggacggctcagacattcctgcgggcaagtacgacctcgtg
gtgtcagacagtgcctgcccaccattggtggagaaaaacgtgacatcacaggaagtcccg
ctggtgtcccccgagtggatcatccagagcgtcatccgcggggagcgcatgggtttccac
agcaagcctcagtatcaccatgactactcttcctcttcctcctcctaa
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