Gymnodraco acuticeps: 117533838
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Entry
117533838 CDS
T09661
Name
(RefSeq) RNA exonuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117533838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gacu03009
]
117533838
Ribosome biogenesis [BR:
gacu03009
]
Eukaryotic type
Pre-60S particles
RNases
117533838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
RRM_3
Motif
Other DBs
NCBI-GeneID:
117533838
NCBI-ProteinID:
XP_034053693
UniProt:
A0A6P8SSC6
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MEPSSAEVTCNGRKRKRIAPAAHEEVKRLKTEEGDETLESEPSSRSPRISVLPDRLQQPI
TANDLTELLHYAALGKTAGVEQPSWCRLHHQKKVKAVNVVMIEGLTQSHFYKHYLTLQHL
RTNYSTRVTFTPSSTDLASGIFSSEVPESDDPSVSQRHNGSSDLPKGLRIHPVITKFGTK
RRGLTAYVLPEEEMVKKRWPVKGMPDFQDFVCTDSVDCVTDSSPLYGLDCEMCLTEKGNE
LARVSLVDSDGKCVVDELVKPPNRIINHFTRFSGITAAMLRPITTTLRNVQTRLKTLLPS
DAVLVGHSLNNDLVALKLIHPHVIDTSLLYRREFGQRFKLKVITESVLNRQIQTEEKTGH
NPIEDALAALELAQYFIKKGPRQVVELHMEELWGYRIIKEPEDLAPAEPAPPQSQRFPDV
LQRHGRSVAFLGKRSDIALDLSNQQWFNSDKEVLASFRGQTRCPFLSVLQLPSLSSHLKK
SFPHLEQQRVCAHLRDLCVVLAGPLPAGSSEQEVRRLFRCCGPLRNIKMLNTTVRVHAEV
EFELLEGAELAVKTLNGLNMQGQSIKVQRPVYESMLDADLTLDALMCDNNTHLYAVKLNS
SMADSVHISERVNGHTLNAKCSDVASVQKVNGQHSQPKTKSKLSEETVRETFGLFGSVER
VALLQQSGKHARHAIIRFESSEGKRAALSSSEDLRKENYLVCPSLTPHHLPSWTAVTTPT
TSEERSHMHISSQDEEMDLLMGKLDRRLQKLFRYLPEGTLSVVVLLGHTSDHGLFPGLCL
MEVNQES
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggagccctcatcggcagaagtgacatgcaacgggaggaagagaaagaggatcgcccct
gcagcacatgaggaggtcaagagattaaaaacagaggaaggagatgagactctggagtct
gaaccctcctctcgctcaccgaggatctctgtgctgcccgaccgccttcaacaaccaata
acagcgaatgatctgacagagctgctgcattacgccgctctggggaaaacagctggcgtt
gaacagcccagttggtgccgcctccaccatcagaagaaggtcaaagctgtgaatgtggtg
atgatagaggggctgacccagagtcacttttacaaacactacctcaccctgcagcacctc
aggaccaactacagcactagggtcacgtttactccatcctccaccgacctggcctcagga
atcttcagcagtgaagttcctgagtcagacgatccctctgtttcccaaagacacaatgga
agcagtgatttaccaaaaggcctgaggattcacccagtaatcaccaagtttgggaccaag
aggagaggactgacagcgtatgttctccccgaggaggagatggtcaagaaacgctggcct
gtcaaaggaatgccagacttccaggactttgtgtgcacagacagtgttgactgtgtgact
gacagcagccctctgtatggactcgactgtgaaatgtgtctgacagagaagggtaatgag
ttggctcgtgtctctctggtggacagtgatgggaagtgtgttgtggatgagctggtgaaa
cctcccaacagaatcatcaaccacttcaccaggttctctggtataactgcagcgatgttg
cgaccaatcacaacaaccctacggaatgttcagacaaggctcaagacgctgttgcctagc
gatgcagtcctggtgggacactcactaaacaacgacctcgtcgctctgaaactgatccac
cctcatgtgatcgacacctcgctgctgtacaggagagagttcggacagaggttcaaactg
aaggtcatcacagagtcagtgctgaatcggcagatacaaactgaagagaagacgggtcat
aatcccatcgaggatgctttggcagccctggagctggctcagtactttataaagaaagga
ccgcgacaggtagtagagcttcatatggaggagctgtggggatataggataataaaggag
cctgaagacttggcacctgctgaacctgcacccccacagagtcagaggtttcctgacgtt
ctacaaagacatggccggtctgttgcctttttagggaagcgctctgacatcgctctggat
ctgtccaatcagcagtggttcaactctgacaaggaggtcttagcgtctttccgggggcag
accaggtgtccgttcctctccgtgctccagctcccttccctctccagccatctgaagaaa
agcttcccccacctggagcagcagagggtgtgtgctcacctcagagatctgtgtgtggtg
ttggccggtccacttcctgctggatcctctgaacaggaagtgaggcgcctgtttcgctgc
tgtggaccgcttcgaaatatcaaaatgttgaacacaactgtccgggttcatgcagaggtg
gagtttgagcttctggagggagctgagctggctgtaaaaacgttgaatggactcaacatg
cagggacagtccatcaaggtccagcgtcctgtctacgagtcgatgctggacgccgatctg
actctcgatgctttgatgtgtgacaacaacactcacctctatgctgttaaactaaactcc
agtatggctgacagcgtacacatttctgaaagagtcaatggacatacgttaaatgccaaa
tgttcagatgttgcttctgttcaaaaagtaaacggtcaacattcgcaaccaaagacgaaa
tctaagctgtctgaggagacggtcagagagacgtttggtctctttggttcagtggagaga
gtcgccctgctgcaacaatctggaaaacatgcaagacatgcaatcataaggtttgaaagc
tcagaggggaaacgtgcagctctcagctcctctgaagatctcaggaaggagaactacctc
gtctgtccttcactaactcctcaccaccttccctcctggacggcagtaacaacaccgacc
acctcagaggagaggagccacatgcacataagctctcaggacgaggaaatggatctcctg
atggggaagttggaccgccggctacaaaagctgttcagatatctcccagaaggcaccttg
tctgtggtcgtgctgctcggacacaccagtgatcacggtctctttcctggtctgtgcctt
atggaggtcaatcaggagtcttaa
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