Gymnodraco acuticeps: 117534025
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Entry
117534025 CDS
T09661
Symbol
dicer1
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gacu03036
]
117534025 (dicer1)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117534025 (dicer1)
microRNA pathway
RISC loading complex
117534025 (dicer1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DEAD
ResIII
Cas3-like_C_2
DSRM_2
dsrm
Motif
Other DBs
NCBI-GeneID:
117534025
NCBI-ProteinID:
XP_034053930
UniProt:
A0A6P8T9E6
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MAGLQLVTPATSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAAIEHNTIVCLNTGSGK
TFIAVLLTKELSHQIRGHYQENAKRTVFLVNTALTVVQQAAAVRTHSDLAVGEYTDVEET
SAWTDQRWSQELIQNQVLVMTCHIFLHVLKNKILPLSKINLVVFDDCHLAITEHPYCEIM
KLFEGSSCCPRILGLTASILNGKCDPSELEQKILSLERVLKSNAETATDLVVLDRYSSQP
REVVLDCGPYLDKSGLSQCLQEELKEALHFLNDCNLCVTREDRDPTFISKQVLGDFLAVL
MVLGPWCADKAAGIMVREIQKYIKHEQEELSRKFLLFTDTILRKVHALCEEHFSPASLDL
KFVTPKVLRLLEILHEYKPFERQQFESVEWYNNRNQDDYVSWSDSEDEDEDEEVEVKERP
ETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKLDPELAYISSNFITGHSIGKNQPR
NKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPVSNYIMLADSERTRGFEEDLTTYKSIEKILRNKCSKSVEVGEYELEQVLDDDNI
IPPYVLRSEDGSPRVTVNTAIGHINRYCARLPSDPFTHLAPKCKTAERPDARFQSTLYLP
INSPLRVPLKGPIMFCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHD
EEETSVPGRPGSTKRRQCYPKAIPECLRDSYAVPEQTYYLYVVGMVLTTPLPDELNFRRR
RLYPPEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFTLTTAQLDLITRLH
QYIFSHILRLEKPALEFKPTLADSAYCVLPLNVVEDSNTLDMDFSFMEDIEKSEARTGIP
TTQYTKQNPFSFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAE
YYKTKYNLDLSNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNK
QILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASEAGVGAQTLPPDFR
YPNLDFGWKRSIDSKTFISCADSCSDDDDDENEGEGPCEHQETLTPEPNSLARPSSPHPL
VDPEPEEEPCTRTLTNGTALGTNCDDDGPQDEHLHQQDNCQRSRPRSPGPQSPQSIQSTT
SLPVQPPPPSSKKPSSSPPQPSDECTPGSTSNPATSVCCLPAPTAPSDQHGAPAGDPLKS
LGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSK
KVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSCTDILDSEEVKEELQAN
GQSGTDFDEDDEEAEECKEVEEEEEEEEGLMLKEEPKDEVNVEDDLEYYKEHIKFIDNML
LGSGAFGKKISLSSFPPSLTPASASAPATETPYEWKPPKKPHHPTAAHYPPEPAPSGPSA
EEFDYSSWDAMCYLDPSKAGEEDDFVVGFWNPSEENCGAELGKQSISYDLHTEQCIADKS
IADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPMDRGALTGAVVLSGQTNTLDLNYGWL
KIPPRSVLDHHPDPEGTLTHLISGFENFERKINYTFQNKTYLLQAFTHASYHYNTITDCY
QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAI
SPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYM
DSRMSLETVWQVYYPXMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVT
VEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVQKN
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcctacagctggtcacccctgccacttcacccatggggcctttctttggtctg
ccgtggcagcaggaggctatccatgataacatctatacaccgaggaaatatcaggtagaa
cttcttgaagcagctattgaacataatactatcgtctgcttgaatactggctcagggaag
acctttattgcagttcttctaacaaaagagctctcccaccaaatccgtggacattaccaa
gaaaatgcgaagaggactgtttttctggtgaacacagctctgactgtagttcagcaggca
gctgcagtcaggactcactctgacctcgcggtgggagagtacacagacgtggaggagacc
tcagcatggactgaccagcgatggagtcaagagttaatccagaatcaggtgctggtcatg
acctgccacatattccttcacgttctaaagaataaaatcttgccgttgtctaaaatcaac
ttggtggtttttgatgattgtcacctggccatcacagagcacccttactgtgagataatg
aagctgtttgagggctcctcatgctgccctcgtatcctgggtctcacagcctccattctg
aacgggaagtgtgacccgtcagagctggagcagaagatcctgagtctggagagggtcctg
aagagcaatgctgagaccgccactgaccttgtggttctggacagatattcctctcagccc
agagaagtggtgctggactgtggcccctacctggataagagtggtctctctcagtgtctg
caggaggagctgaaggaagcgctccacttcctgaacgactgcaacctctgtgtcaccaga
gaggaccgggaccccaccttcatctccaaacaggtcctgggtgacttcctggccgtgctc
atggttttagggccctggtgtgcagataaggccgcaggcatcatggtgcgcgagatacag
aagtacatcaaacacgagcaggaggagctcagccgcaagttcctgctcttcaccgacacc
atcctgcgcaaagtgcacgccctgtgcgaagagcacttctccccggcctccctggacctc
aagttcgtcacccccaaggtcctccggctgctggagatcctgcacgagtacaagcccttt
gagcggcagcagttcgaaagcgttgagtggtacaataaccgaaaccaggacgactacgtc
tcatggagcgactctgaggatgaagatgaggatgaggaggtggaggtcaaagagaggcct
gaaaccaactttccctcgccgttcaccaacatcctttgtgggatcatcttcgtggagagg
cgctacacggctgtcgtcctcaaccgtctgatcaaagaggcggggaagctggacccggag
ctggcttacatcagcagcaacttcatcaccggccacagcatcggcaagaaccagccacgc
aacaagcagatggaggtggagttcaggaagcaagaggaggttcttcgcaagttccgcgct
catgaaaccaacctgctgatcgccaccagcatcgtggaggagggcgtggacatcccaaag
tgtaacctggtggtgcgcttcgacctgcccacagagtaccgctcctacgtccagtccaaa
ggcagagcgcgagcccccgtctccaactacatcatgctggctgacagcgagaggaccaga
ggcttcgaggaagatctcaccacctacaagtccatagagaagatcttaaggaacaagtgc
tccaagtcggtggaggtaggtgagtatgagctggagcaggttctggacgatgacaacatc
atccctccctacgtgctccgctctgaggatggaagcccccgggtcaccgtcaacacggcc
atcggacacattaacaggtattgtgctcggctgcccagcgaccctttcactcacttagcc
ccgaagtgcaaaactgcagagaggccggacgcacgcttccagtccacgctctacctgccc
atcaactcccctctgagagttcctcttaagggtcctataatgttctgtgccaggctggca
gagaaagcagttgcacttctatgttgtgagaaactccacaaaataggtgagctggatgat
cacctgatgccggtgggaaaggagacggtgaaatatgaagaggagctggacctccacgat
gaagaggagaccagcgtaccaggccggcccggctccaccaagaggaggcagtgctaccct
aaagccatacccgagtgtctgcgggacagctacgcagtgccagagcagacgtactaccta
tatgtggtcgggatggtgctcaccacccccctccctgatgaactcaactttcgcaggagg
aggctgtacccaccggaggacaccaccaggtgcttcggcatcctgactgccaaacccata
cctcgaatcccccatttcccagtgtacacccgctcgggtgaggtgaccatctccatcgag
ctgcagaagtccggcttcacgctgaccaccgcccagctggacctcatcacccgcctgcac
cagtacatcttctcccacatcctccgcctggagaaacctgcactggagttcaagcccacg
ctggctgactcggcctactgcgttctacctctgaatgttgttgaggactccaacacacta
gacatggacttttccttcatggaggacattgagaagtctgaggcccgcaccggcattcct
accactcagtacaccaagcagaaccccttcagcttcaagctggaggactaccaggatgct
gtcatcattccacggtatcgtaactttgaccaaccgcatcgcttctatgtcgccgacgtg
tacacagacctgacgccgctcagcaagtttccctctccagagtacgagacgtttgctgag
tactacaaaaccaagtacaacctggacctgtccaacctgaaccagccgctcctggatgtg
gaccacacctcctccagactgaacctgttaacccctcggcacctgaaccagaaaggcaaa
gctctgccgctcagcagcgcagagaagaggaaggccaagtgggagagtctgcagaacaaa
cagatcctggttccagagctgtgtgccatccaccccatccccgcctctctgtggaggaaa
gctgtgtgcctgcccagcatcctgtaccgcctccactgcctgctgactgcagaggagctg
cgggcccagaccgccagtgaggctggagtgggggctcagaccctcccccccgacttcagg
tatccgaacctggactttggctggaagcgatccatcgacagcaagacgttcatctcctgc
gctgactcctgcagtgatgatgatgatgatgagaatgagggtgagggtccctgtgagcac
caagagactctaacccctgaacccaactccctagcgcgtcccagcagtccccaccccctc
gtggaccctgaacctgaagaagagccctgcaccaggaccctaaccaacggcacggccctc
ggcaccaactgtgatgacgacggcccccaagacgagcaccttcaccaacaagacaactgc
caacgttcccggccccgctcccctgggccgcagagcccccaatcaatacaaagcactacc
tcacttcctgtgcagcccccccctcccagctccaagaagcccagctccagtcctccgcag
cccagtgacgaatgtacgccagggagcacctcaaatccagctacctcagtctgctgcctg
ccggctcccacagcaccttctgatcagcacggagccccggcaggagaccccctcaaaagc
ctggggcccaaccctggtctcatcctgcaggcgctgaccctctccaacgccagcgacggc
ttcaacctggagcgcctcgagatgctcggagattctttcctcaaacacgccatcaccacg
tacctgttctgcacctaccccgacgcacacgagggccgcctcagctacatgcgcagcaag
aaggtgagcaactgtaacctgtaccgcctggggaagaagaagggcctccccagcaggatg
gtggtgtccatcttcgacccccccgtcaactggctgccccccggatacgtggtgaaccag
gacaagagctgcacagacatactggactcagaggaggtcaaagaggagctccaggccaac
gggcagtctggaacggactttgacgaggatgatgaggaggctgaggagtgtaaggaggtg
gaggaggaggaagaggaagaggaggggctgatgctgaaggaagagccgaaggacgaggtg
aacgtggaggacgatctggagtactacaaagagcacatcaagttcatcgacaacatgctg
ttagggtccggagcatttggcaagaagatctctctgagcagcttccccccctccctcacc
ccggcctcggcttccgcccctgctacggagaccccatacgagtggaagcccccgaagaag
ccccaccatcccaccgcagcccactacccccccgagccggcgcccagcgggccctcagcc
gaggagtttgactacagctcgtgggatgccatgtgctacctggaccccagcaaggcgggg
gaggaggacgacttcgtggtgggcttctggaacccgtcggaggagaactgcggggcggag
ctgggcaagcagtccatctcctacgacctgcacacggagcagtgcatcgccgacaagagc
atcgccgactgtgtggaggctctgctgggctgctacctcaccagctgtggagagagagcc
gcccagatgttcctctgctccctgggcctcaaggtgttaccgatggacaggggggctctg
acgggtgccgtggtgctaagcggtcagaccaacactttggacctgaactacggctggctg
aagatccccccccgctccgtgctggaccatcatcctgacccagaaggaactctcacccac
ctcatctccggcttcgagaactttgaaagaaagatcaactacacgtttcagaacaagacc
tacctgctgcaggccttcactcacgcttcctaccattacaacaccatcacagattgttac
cagcgactggagttcctcggcgatgcaattttagactacctcattacaaagcacctttat
gaagacccccggcagcactccccgggcgtgctgaccgacctgcgctcagcactcgtcaac
aacaccatctttgcctctctggccgtcaagtacgactaccacaagtacttcaaggccatc
tcgcccgagcttttccacgtcatcgacgacttcgttcaattccagctggagaagaacgag
atgcaaggcatggactctgagctgcggcgctcagaagaggacgaggagaaggaggaggac
attgaggtcccgaaggccatgggggacatctttgagtcgctggccggagccatctacatg
gacagcaggatgtctctggagaccgtgtggcaggtgtattatccantgatgaggccactc
atagagaaattctctgccaacgtgccacgctctcctgtcagggagctgctggagatggag
ccagaaactgccaagttcagccctgcggagaggacgtacgacgggaaggtgcgggtgacc
gtggaggtcgtggggaagggcaagttcaaaggagtgggccgcagctaccgcatcgccaag
tctgcggcggcgagacgagctctgcgcagcctcaaagccaatcaacctcaggtccagaaa
aactga
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integrated database retrieval system
