Gymnodraco acuticeps: 117534255
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Entry
117534255 CDS
T09661
Symbol
rbck1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04217
Necroptosis
gacu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117534255 (rbck1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117534255 (rbck1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gacu04121
]
117534255 (rbck1)
Enzymes [BR:
gacu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117534255 (rbck1)
Ubiquitin system [BR:
gacu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117534255 (rbck1)
Multi subunit type E3
LUBAC complex
117534255 (rbck1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-RING_5
Zn_ribbon_RanBP
zf-RING_2
ubiquitin
zf-C3HC4_2
IBR
zf-RING_11
DUF5817
Motif
Other DBs
NCBI-GeneID:
117534255
NCBI-ProteinID:
XP_034054338
UniProt:
A0A6P8STW3
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MASPVSPRGHLKEAEELALSLSEALSRGDGQEAGKLCEILSQLSVPVSVSVNTQAYPQGS
IRLKVGVEDAQSDNCIQVTVLVSSDMTIAQLKDKFSRDYGFVPTVQRWVIGKRLAQDHET
LFSHGVRSDGDQVFLFILSAQAAHLTRQQHLLDQEQERMDGIVVQLFPRGTGGGGVEKTA
PDNKQVPPPLPAKPNVFPKPQLGWTCSMCTLLNKPTRPGCEACGGDRPEDYQVPDIYKPD
QQEVLRIQQEQLATLQYEQAQQEERERNYLNLLATDDQSLFPNALEEECPICFSPLQPQE
GIVLRECLHVFCRECLKGTIVNNRDAEVSCPENCDSKLLDREIQALLTEEEHQRFLEMRL
SIAESRSEHSFHCQTPNCRGWCIYEDEVNEFLCELCKETNCILCRAIHEGMNCKDYQDDL
RIRAENDEAAMKTKQMLDSLLQNGEAMKCPRCDIIVQKKDGCDWICCLMCKTELCWVTKQ
ARWGPNGNGDISGGCGCRVNQQPCHPNCQNCH
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcctctccagtttcaccgagagggcatttgaaagaggcggaggaactggccctctct
ctaagtgaagccctcagccgtggagacggacaggaagcaggaaaactgtgtgaaatactg
tcacaactctctgttccagtgtctgtcagcgtcaacactcaggcctaccctcagggctcc
ataaggttgaaggttggagtggaggacgcgcagtcagataactgcatccaagtgactgtt
ctggtttcatctgacatgacaattgcacaacttaaagacaagttcagccgtgactatggg
ttcgtccccactgtgcagcggtgggtgatcgggaagcggttggctcaagaccacgagacg
ctgttcagccacggggtccgaagtgacggagaccaggtgttcctgtttatcctctccgcc
caggctgctcatctcacccggcagcagcacctactggatcaggagcaagaacgcatggat
ggcatcgtggtgcaactttttcccagagggacgggaggaggtggtgttgaaaagacagct
ccagacaataaacaagttcctcctcctcttcctgctaaacccaacgtgtttcctaaacct
cagttgggctggacctgctctatgtgtacgttgttgaacaaacctacacgtcctggctgc
gaggcgtgtggaggggaccggcccgaggattaccaggtgcctgacatctacaaaccagac
cagcaggaggttcttcggattcaacaggaacagttggccacattgcagtatgaacaggct
cagcaggaggaacgtgagaggaactacctgaacttgttggcaacagatgaccaaagcctt
ttccccaacgccttagaggaagagtgtcccatctgcttctctcccctgcagccacaagag
ggcatcgtgctcagagagtgtctccacgtcttctgcagggagtgtctcaaagggactata
gtgaacaatcgagatgcggaggtgtcctgtcctgagaactgtgacagcaagctgctggac
agagagatacaagcgctgctcacagaagaggagcaccagcggtttctggagatgcgtctg
agcatcgcagagagccgctccgagcacagcttccactgtcagactcccaactgtcggggg
tggtgcatctacgaggacgaagtcaacgagttcctctgtgagctctgcaaagaaaccaac
tgcatcctctgcagggccatccatgaaggcatgaattgcaaggactaccaggatgacctg
cgtatacgagcggagaacgacgaggcggctatgaaaactaagcagatgctagatagcctt
ctacagaatggggaggccatgaaatgtccacggtgtgacatcatcgtccagaagaaagat
ggctgtgactggatctgctgtttgatgtgcaagacagaactctgctgggtcaccaaacaa
gctcgctggggaccaaatggaaatggcgacatatctgggggctgtggatgccgagtcaat
cagcagccgtgccatcccaactgccaaaactgccactga
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