KEGG   Gymnodraco acuticeps: 117534573
Entry
117534573         CDS       T09661                                 
Name
(RefSeq) autophagy-related protein 16-2-like
  KO
K20868  autophagy-related protein 16-2
Organism
gacu  Gymnodraco acuticeps
Pathway
gacu04140  Autophagy - animal
gacu04145  Phagocytosis
Brite
KEGG Orthology (KO) [BR:gacu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    117534573
   04140 Autophagy - animal
    117534573
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gacu04131]
    117534573
   03029 Mitochondrial biogenesis [BR:gacu03029]
    117534573
Membrane trafficking [BR:gacu04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    117534573
 Others
  Specific organelles associated proteins
   Auto phagosome
    117534573
Mitochondrial biogenesis [BR:gacu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    117534573
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_EIPR1 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_NOL10_N CFAP251_N Beta-prop_WDR19_1st Beta-prop_WDR41 NBCH_WD40 Beta-prop_NWD2_C Beta-prop_ACSF4 eIF2A ASA1 Beta-prop_DCAF4 Beta-prop_SPT8 WD40_RFWD3 TRM82_WD Ge1_WD40 Tricorn_2nd DF190_C Beta-prop_Vps41 Beta-prop_RIG_1st Tricorn_N
Other DBs
NCBI-GeneID: 117534573
NCBI-ProteinID: XP_034054696
UniProt: A0A6P8SVY0
LinkDB
Position
Unknown
AA seq 386 aa
MNTRNERRCRAREAARSKVTVETSGSAPTSRSSSPRRESERRLFRSASATSPRILTSIRA
LFQRRRGQSVSSLQEDQLFPVGVCLSARLPVRALHVLEAHEQGINAVRFNSSSELLATGG
TDRAVKLWDVRAGSLTHRATLDGSTEGVTCIEFDPKGPRVLAASYDKSALLWRLDDPVPK
VTLTGHSRRVTAARFGLNLQVVTGSADRTVRLWDLQRACCVQVVEVPSYCSDLICTGYCI
ISGHYDSKIRVWDTRAVRCIQELPAHGKVTSLDISPDHCHLLSCCRDDCLQLIDLRGRSY
ERVCFRADGFKCGSDSTKAVISPDGCFLAAGSADGAVYIWNVSTGNLETRLPDKHSSSIS
AVSWSPSGEYVVSVDLSRRAVLWRDV
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgaacacacgcaacgagcgccgctgcagagctcgagaggcggcgaggtcgaaggtaacc
gtggaaacgagtggcagcgctccgacctccagatcttcgtctccgaggcgagagtcggag
cgtcgactcttcaggtcggcgtcggcgacgtccccgaggatcctcacctccatcagggcg
ctgttccagaggaggcggggccaatcagtgagcagcctgcaggaggatcagctgtttcct
gtcggcgtctgtctgtcagctcgacttcctgtcagagctctgcacgtcctggaagctcat
gagcagggcattaacgctgtgaggttcaactccagctccgagctgctcgccaccggagga
accgaccgagccgtcaaactgtgggacgtcagagcaggctcgctgacccacagagcgacg
ctggacggcagcacggagggcgtcacctgcatcgagttcgaccccaaaggcccgagggtc
ctcgccgcctcctacgataagtcggctctgttgtggcggctggacgaccccgttcccaag
gtgactctgacgggtcacagcaggagggtgacagcagctcgtttcggtttgaatctgcag
gtcgtgacgggcagcgccgacagaacggtccgactgtgggaccttcagagagcctgctgt
gtgcaggtagtagaggtgccatcgtattgcagcgacctcatctgcactgggtattgcatc
atcagcggacactacgatagcaagatcagagtttgggacaccagggcggtgcgatgcatt
caggaacttcccgcccatgggaaagtcacgtctctggacatcagccccgaccattgccat
ctgctcagctgttgccgtgacgactgcctccagctgatcgacctgagggggcggagctac
gagcgcgtctgcttcagagccgacgggtttaaatgtggcagcgacagcacgaaggctgtc
atcagtccagacggctgcttcctcgccgctggatcagctgacggtgcagtttacatctgg
aacgtttccaccggcaacctggagacccgcctccccgacaaacacagttcgtccatcagc
gctgtctcctggtctccgtcgggcgaatacgtcgtcagcgtggacctaagtcgtcgggcc
gtcctctggagggacgtctga

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