Gymnodraco acuticeps: 117534808
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Entry
117534808 CDS
T09661
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117534808 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117534808 (cpsf4)
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117534808 (cpsf4)
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117534808 (cpsf4)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117534808 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_12
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
117534808
NCBI-ProteinID:
XP_034054930
UniProt:
A0A6P8TC45
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
MQDLLATVDHLKFDLELAMQQQLGAQPLPFPGMDKSGSAVCEFFMRAACVKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICMNYLVGFCPEGKSCKFMHPRFELPMGANEQPP
LSQQMQNQAKPVPTIGRSSLSLIQLTNSSPNMRPQNHMPMGPPPHHQNHMGGNRGPRPLD
QVTCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacctcctggccaccgtggatcacctgaagtttgacctggagctggccatgcag
cagcagctcggggctcagcctctgcctttccccggcatggacaaatccgggtctgctgtt
tgtgagttcttcatgagagcagcttgtgtgaaaggtgggatgtgtccgttccgtcacatc
agcggagagaagacggtggtgtgtaagcactggctcagaggactgtgtaagaaaggagac
cagtgcgagttcctccacgaatacgacatgaccaagatgcccgaatgctacttctactcc
aaatttggtgagtgtagcaacaaagagtgtcccttcctgcacatcgacccagagtccaag
atcaaagactgtccctggtacgaccgaggcttctgcaaacacggtcctgactgcagacac
agacacacaagaagagtgatctgtatgaattacctggtgggcttctgtccggaggggaaa
tcctgtaaattcatgcaccctcgttttgagttgccaatgggagccaatgaacagcctcct
ctgtcacagcaaatgcaaaaccaggcaaagccggttcccaccatcggccgctcgtcgctc
tctctcatccagctgaccaactccagtcccaacatgcgcccgcagaaccacatgccgatg
ggtcctcctcctcatcatcagaaccacatggggggcaacagagggccccggcccctggac
caggtcacttgctacaagtgcggtgagaagggccactatgccaacaaatgcactaaagga
cacctcgccttcctgagtggacagtaa
DBGET
integrated database retrieval system
