Gymnodraco acuticeps: 117535287
Help
Entry
117535287 CDS
T09661
Symbol
cnot3b
Name
(RefSeq) CCR4-NOT transcription complex subunit 3b isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117535287 (cnot3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117535287 (cnot3b)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117535287 (cnot3b)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117535287 (cnot3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
7tm_6
Motif
Other DBs
NCBI-GeneID:
117535287
NCBI-ProteinID:
XP_034055589
UniProt:
A0A6P8SX00
LinkDB
All DBs
Position
Unknown
AA seq
958 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKGKIWRSEGHLSKLHNAANANQKEKYEADL
KKEIKKLQRLRDQIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGL
GLAQKVDPAQKEKEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKENQDRIEE
LKKFIEKHRHHIRMLETILRMLDNDSVQVDSVRKIKDDVEYYLDSSQDPDFEENEFLYDD
LDLDELTQTLVATSPPGQLEDEIFQHSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGR
STDSEVGQSPVKNGNPSSSLSSSSSSSSSSSSSSSCSSSSFVSGLTSSSLVSMAPITGGG
PGANSHLGSLGGLLSNTSAGSYSNATQQPPHPSAQQQQAKSLVSSAPSAPISIPISSANS
HMASSPPNAITQGLFTSSSQAQSLSGPTSTSNSLGLSLGLSLGKGGMSIPTSSMSGSLGL
SGMQASLSNMASLLSGSTPAPYAQAASSGAIGSGLPGSLGGIGISPSSSNSAVGSIGSGS
ITVGGPTSSSGGLLGPAPGLSGISSGILGLGSGQSGMQGSSLMSLSPVGGLAPGSGVGVI
GSNGGSSASAGSGVVGGNMSLSGRPPSQQKQNGSTSGVPFVSFFGDTGYSAVLADSTTDS
ALTSASQSLSSQPSCLTSTANQTKDTGSSLLGSICLSSSSPSQAFYSEAKTVSGSSLLNG
PMSYSQSSDSIKPQETLSSLKSMAERAALSSGMEGDVPSLHLTPVSLSCLSSDIFPSSTT
AQSGPSSAPQLSLSEVSIPPSLGVCPLGPVPLSKDQLYQQAMEEAAWTHMPHPSDSERIR
QYLMRNPCPTLTFHHLVPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQS
WRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaactacaaggtgaaatagatcgatgtctgaaaaaagtagcggaa
ggagtcgaacagtttgaagacatttggcaaaagggcaagatttggagaagtgaaggacat
ctatccaaacttcacaatgcggcgaacgcaaatcagaaggagaaatatgaagcagacctc
aagaaagagattaaaaagctacagcgtcttcgagaccagatcaagacgtgggtggcttcc
aacgagatcaaagacaaaaggcagctagtagagaaccgcaaactcatagaaacgcaaatg
gagcggttcaaaatagtggagagagaaaccaagacaaaggcgtactctaaagaagggctg
ggtctggcccagaaggtggaccccgcccagaaggagaaggaggaggttggcacgtggcta
acgaatacgatagacacgctgaacatgcaggtggaccagttcgagagcgaggtggagtcc
ctctcagtccagaccaggaaaaagaaaggagacaaagagaatcaggaccggattgaggag
ctgaagaagttcatcgaaaagcatcgtcaccacatccggatgctggagaccatactgagg
atgctggacaacgactcagtgcaggtggactccgtcaggaagatcaaggatgatgtggag
tattacctggactcgtcgcaggatccggacttcgaggagaacgagtttctctacgacgac
ctggacctggacgagctcactcagacgctggtcgccacctccccacccggacagctggag
gacgagatcttccagcactccagcagcacccccacctccaccacctcctcttcacccatc
cccccctcgcctgccacttgcactacggagaactctgaagatgacaagaagaggggacgg
tcaacagacagtgaagtcggtcagtcacctgtgaagaacggaaacccctcctcttcatta
tcctcttcctcctcctcctcctcctcttcttcctcttcttcttcctgctcctcttcttca
tttgtgtctggactgacctcgtcctctctcgtctccatggcgcccatcacggggggagga
ccgggggccaacagtcacctgggcagcttggggggcctcctctccaacacgtcggccggc
agctacagcaacgccacccagcagccgccgcacccgtcggcacagcaacagcaggccaaa
agcttagtgagctccgccccttcagctcccatctccatccccatcagctctgccaacagc
cacatggcctcttctccccccaacgccatcacgcaggggctcttcacttccagctcccag
gcccagtctctgtcggggcccacgtccacctccaacagcctgggcctcagcctgggcctc
tcgctggggaaaggcggcatgtccatccccaccagctccatgtccgggagcctgggcctg
tcagggatgcaggcgtccctgagcaacatggcaagcctactgtcgggttccaccccggcc
ccctacgctcaggcagcctcctcaggggccatcggctccggcctgcccggctctctgggt
ggcatcggcatcagcccctcctcctccaacagcgcagtgggctccatcggcagcggcagc
atcacggtcggcgggccaacctcctcctcgggggggctgctgggcccggcgccggggctg
agtggcatcagctccggtattctgggtctgggctccgggcagtcggggatgcaggggtcc
tccctcatgtcgctcagcccggtcggagggttagcgcccggtagcggagtgggggtcatc
gggagcaacggaggcagctcggcatcagcagggagcggagtggtgggggggaacatgtcg
ctctccggcaggccgcccagccagcagaagcagaacggtagcaccagcggtgtacccttt
gtgtctttttttggcgatacaggttacagcgctgtgttagcagacagcacaacagactcc
gccctcaccagtgccagccaatctctcagcagccaaccctcgtgtctgacctccacagcc
aatcagactaaggacactggttccagtctgctgggctccatctgtttgtcgtccagttcc
ccgtcgcaggccttctacagcgaggccaagacggtgagcggcagcagcctgctgaacgga
cccatgtcctactcacagtcctccgacagcatcaagccccaggagactctgagcagcctg
aagtccatggccgagcgagcagcactcagctcagggatggagggagacgtgccctccctg
cacctcaccccagtctctctctcctgtctgtcttcagacattttccccagcagcactacg
gcccagtcgggcccctcgtcagcgcctcagctctcgctgtcggaggtcagcatccccccg
tcactgggggtgtgcccgctggggcccgtccccctctccaaagaccagctctaccaacag
gccatggaggaggcggcgtggacgcacatgccccacccgtccgactccgagaggatcagg
cagtacctgatgaggaacccgtgccccaccctgactttccaccacctggtgcccccaccc
cactctgacactgtagagttctaccagaggctttccacggaaaccctcttcttcatcttt
tactacctggagggcactaaggcccagtatctggcagccaaggccctgaagaagcagtca
tggaggttccacacaaagtacatgatgtggttccagaggcacgaagaacccaagaccatc
acggatgagtttgagcagggaacgtacatttactttgattatgagaaatggggccagcgc
aagaaggaaggcttcacgtttgagtaccggtacctcgaggaccgagacctccagtga
DBGET
integrated database retrieval system
