Gymnodraco acuticeps: 117535391
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Entry
117535391 CDS
T09661
Symbol
alyref
Name
(RefSeq) THO complex subunit 4 isoform X1
KO
K12881
THO complex subunit 4
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03013
Nucleocytoplasmic transport
gacu03015
mRNA surveillance pathway
gacu03040
Spliceosome
gacu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117535391 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
117535391 (alyref)
03015 mRNA surveillance pathway
117535391 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117535391 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117535391 (alyref)
03041 Spliceosome [BR:
gacu03041
]
117535391 (alyref)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117535391 (alyref)
TREX complex
117535391 (alyref)
Spliceosome [BR:
gacu03041
]
Complex C
Other components
EJC/TREX
117535391 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117535391 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117535391
NCBI-ProteinID:
XP_034055726
UniProt:
A0A6P8SYD2
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MGWAGNILGILLGTEHPGHVGKWEPMLAPTPSRVDSVIDRGKGILKSAGRSLSSVAAKNS
FRISGSMTCLTTASVASAAPLEVAEEAALKPGGSLLVSNLDFGVSDADIQELFAEFGTLK
KAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGIPLDGRPMNIQLVTSQIDQQRRPMQ
GLNRGGGGGMNRNRGAGFRGVQRGRGGRGAGGGGRGRGGRGGTAKQQLSAEELDAQLDAY
NARMDTS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggggtgggcagggaacattttggggatcctcttgggaactgagcaccctggccatgtt
gggaagtgggagcccatgcttgccccaacacccagccgtgtggactctgtgattgacaga
ggcaaggggatcctgaagtcagcaggtcgttctctttcatctgttgcagccaaaaacagc
ttccggataagtggcagcatgacatgtttgacaacggcttcagtggcttcagcggccccg
ctggaggtggcggaggaggcggcgttgaaaccggggggaagcctcctagtctccaatctc
gactttggcgtgtcggatgcagacattcaggaactctttgctgaatttgggaccctaaaa
aaggcagcagttcattacgaccgatcgggaagaagcctgggaaccgcagatgtccacttt
gaaaggcgagcagatgccctgaaggccatgaaacagtacaacggcatcccacttgacggg
cggcctatgaacatacagctcgtcacatcacagattgaccaacagaggcgacctatgcag
ggtctgaacagaggtggtgggggtggcatgaacagaaatcgtggagctggcttcagaggt
gtgcagagaggccgaggcggacgtggtgctggaggtggaggaagaggtcgggggggacgc
ggaggtactgccaagcagcagctgtcagcagaggagcttgacgcccagttagacgcctac
aatgccaggatggacaccagctaa
DBGET
integrated database retrieval system