KEGG   Gymnodraco acuticeps: 117535391
Entry
117535391         CDS       T09661                                 
Symbol
alyref
Name
(RefSeq) THO complex subunit 4 isoform X1
  KO
K12881  THO complex subunit 4
Organism
gacu  Gymnodraco acuticeps
Pathway
gacu03013  Nucleocytoplasmic transport
gacu03015  mRNA surveillance pathway
gacu03040  Spliceosome
gacu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gacu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117535391 (alyref)
  09122 Translation
   03013 Nucleocytoplasmic transport
    117535391 (alyref)
   03015 mRNA surveillance pathway
    117535391 (alyref)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117535391 (alyref)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gacu03019]
    117535391 (alyref)
   03041 Spliceosome [BR:gacu03041]
    117535391 (alyref)
Messenger RNA biogenesis [BR:gacu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117535391 (alyref)
    TREX complex
     117535391 (alyref)
Spliceosome [BR:gacu03041]
 Complex C
  Other components
   EJC/TREX
    117535391 (alyref)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117535391 (alyref)
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 117535391
NCBI-ProteinID: XP_034055726
UniProt: A0A6P8SYD2
LinkDB
Position
Unknown
AA seq 247 aa
MGWAGNILGILLGTEHPGHVGKWEPMLAPTPSRVDSVIDRGKGILKSAGRSLSSVAAKNS
FRISGSMTCLTTASVASAAPLEVAEEAALKPGGSLLVSNLDFGVSDADIQELFAEFGTLK
KAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGIPLDGRPMNIQLVTSQIDQQRRPMQ
GLNRGGGGGMNRNRGAGFRGVQRGRGGRGAGGGGRGRGGRGGTAKQQLSAEELDAQLDAY
NARMDTS
NT seq 744 nt   +upstreamnt  +downstreamnt
atggggtgggcagggaacattttggggatcctcttgggaactgagcaccctggccatgtt
gggaagtgggagcccatgcttgccccaacacccagccgtgtggactctgtgattgacaga
ggcaaggggatcctgaagtcagcaggtcgttctctttcatctgttgcagccaaaaacagc
ttccggataagtggcagcatgacatgtttgacaacggcttcagtggcttcagcggccccg
ctggaggtggcggaggaggcggcgttgaaaccggggggaagcctcctagtctccaatctc
gactttggcgtgtcggatgcagacattcaggaactctttgctgaatttgggaccctaaaa
aaggcagcagttcattacgaccgatcgggaagaagcctgggaaccgcagatgtccacttt
gaaaggcgagcagatgccctgaaggccatgaaacagtacaacggcatcccacttgacggg
cggcctatgaacatacagctcgtcacatcacagattgaccaacagaggcgacctatgcag
ggtctgaacagaggtggtgggggtggcatgaacagaaatcgtggagctggcttcagaggt
gtgcagagaggccgaggcggacgtggtgctggaggtggaggaagaggtcgggggggacgc
ggaggtactgccaagcagcagctgtcagcagaggagcttgacgcccagttagacgcctac
aatgccaggatggacaccagctaa

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