Gymnodraco acuticeps: 117535575
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Entry
117535575 CDS
T09661
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117535575 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gacu03041
]
117535575 (zgc:163098)
Spliceosome [BR:
gacu03041
]
Complex A
U2 snRNP components
U2 related factors
117535575 (zgc:163098)
Complex B
117535575 (zgc:163098)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
CID
RRM_1
cwf21
CTK3
RRM_7
DUF745
Motif
Other DBs
NCBI-GeneID:
117535575
NCBI-ProteinID:
XP_034055989
UniProt:
A0A6P8TBP6
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MADRKGKPVTPIKTLSKKEQKELKKKEEEKAAEVFEEFLASFESNKKGGGKTFVHGGIVN
ATKEEKATEVKKSELYRPASNFVPFPQHVSSAESKKATQKRKSDEKKKSNLELFKEELKL
IQEEREERHKKKTNDPDGGGGGGCGGNLDIPLSGRSVLYDDLTVPTTTNLYIGCISPKMN
EEILCKEFGKYGPLASVKIMWPRTDEERCRTSNRAFVAYMTRKDAERALASLDGKVIMGF
EMKLGWGKPARIPPQPLYTPVGVRATPPPPSGLPFNAQPRDRFRNDFTKPLGMSKGEMDK
TLSEAVVKVVIPTERNLLFLIHRMIEFVVREGPVFEAVIMNKEKNNPDYRFLFENKSQNH
VYYRWKLFSILQGQTPTEWRTADFRMFRGGSMWRPPILNNYSQTGEDSAEAEEEAPPEEE
VKKGQLRAEHRQRLETLLKELTPNREDIANTMQFCLQRADAAEEVVGHITQSFSLLQTPP
QKKIARIYLVSDILHNSCAKVPGASYYRKYFETKLTQIFGDLNAAHKNIQARLQAEQFKQ
KVSCCFRAWEDWTIYPEPFLIHLQNIFLGFAKAVEETMEPVVEEVSSYLDGAPLDNALID
GLPLRAPVDDLDGCPLGWDPLDGVPVDDIDGVPLGVAIDDIDGMPLEEGSVPLSGVPLSK
WEKTVDSGTFSQVMLGSKWDMVVEKTSANEVKVSANSQDGDDDSESDSSDDGGGSSKYDN
AYFQSSLKSFQMSESKRKRLRELEVKVMKIQDELECGKRQRKSGMSIQQQVEHYRNKLLQ
KEFEKDEDKNERLTSKPKDRSKDDRRDRDRSKRSVEGVRRRGRSRDPDDHARKSRSISPL
KTRSPKWSKRSRSPSPDRKTRKSRSRSPHRSHKKAKKSKH
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggctgatagaaagggaaaacctgtcactccgatcaaaacactctcaaagaaagaacaa
aaggagctcaagaaaaaggaggaagaaaaagcagcagaggtttttgaagaattcttggct
tcgtttgaaagcaacaagaaaggtggagggaaaacgtttgtccatgggggaatcgtgaat
gcaactaaagaggagaaggcaaccgaggtcaagaaaagtgagctttatcgacctgcttcg
aattttgtcccctttccccagcatgtatcatctgctgagagcaaaaaggctacacaaaaa
agaaagtcagacgaaaagaagaagagtaatcttgaactcttcaaagaagagcttaaacta
atccaagaagagcgtgaggagagacataaaaagaagaccaatgaccctgatgggggggga
ggaggaggatgtggaggaaatctggatataccattatctggacgatcggtattatatgat
gacctaacagtgccaaccaccactaacctctacatcggctgcattagcccaaagatgaac
gaggaaattctctgcaaagagttcggtaagtatggtcctctggccagtgtgaagataatg
tggccccgaacagacgaggagcgctgcaggacctccaacagagccttcgtggcttacatg
acccgcaaagatgcagagagagccttggcttcactcgatggtaaagtcattatggggttt
gaaatgaagctgggatggggtaaaccagctcgtattccacctcagcctctctacacaccg
gtgggggtgagggccacgccgccccccccatctggtctgcctttcaacgctcagccgagg
gaccgcttccgcaacgacttcaccaagccgctgggcatgtccaaaggagagatggacaag
actctgtccgaagccgtagtcaaagtggttatcccgacagaaaggaatctattattcctc
attcacaggatgatagagtttgtggtgcgtgaaggccctgtgtttgaagctgttatcatg
aacaaagagaaaaacaatccagactacaggttcctttttgaaaacaaaagccagaatcat
gtgtactatcgctggaaactattctccatcctccagggacagaccccgacagaatggagg
accgcagattttcgtatgtttcgggggggctccatgtggagaccccctatcctgaacaac
tactctcagaccggtgaagatagtgccgaggcagaggaggaagctccccctgaggaagag
gtgaagaaagggcagctcagagcagagcacaggcagaggttggagactttgctaaaagag
ctcactcccaacagagaagatatcgccaataccatgcagttctgtcttcagagggcagac
gcagcagaggaagtcgtgggacacatcactcagtctttctccttgcttcagacgccccct
cagaagaagattgccagaatctatctcgtgtcagacatcttgcacaactcatgtgccaaa
gtgcccggtgcatcatattatcgtaaatattttgaaacaaagcttacacaaatatttgga
gaccttaatgcagcgcataaaaacatacaggccaggctgcaggcagagcagtttaagcaa
aaggtctcgtgttgttttagagcatgggaggactggaccatataccccgagccgtttcta
atccaccttcaaaacatctttctgggcttcgccaaagctgtagaggagacgatggagcca
gtggtggaggaagtatcctcttatctcgatggcgcgccattggacaacgcgctcatagac
gggttgcctctcagagcgcctgtggatgacctcgacggctgccccttaggctgggaccct
ctggacggggtccctgttgacgacattgacggtgtccccttgggagttgccattgacgac
attgatggcatgccattggaggagggcagtgttcctctctccggcgtgcctttgtcgaaa
tgggagaagacggttgactccggaacattttcccaagtcatgcttgggtccaagtgggac
atggtggtggagaaaaccagtgcgaatgaagtgaaagtaagtgccaactcgcaggatggt
gatgacgactctgagagcgacagcagtgatgacggcggcggttcgtccaaatatgacaat
gcatatttccagagctccctcaaaagttttcaaatgtccgagagcaaaaggaaacggttg
agagagctggaggtgaaggtaatgaagatccaagatgagctcgagtgtggaaagaggcag
aggaagtcgggaatgagcatacagcagcaggtggagcactacaggaacaaactgcttcag
aaggagtttgaaaaagatgaagacaaaaacgagagactgacatcaaagcccaaagacagg
tcgaaggatgacaggagggacagagatcggagcaaacgaagtgtagagggcgtcaggaga
cgaggaaggagtcgagatccagacgaccacgcccgaaagtcgaggagcatctctccttta
aagacaaggtctcccaaatggtccaagcgttcccgatcaccatctccagaccggaagacc
aggaagtccaggtcgcggtcgccacatcgctcccataagaaagcaaagaagagcaaacac
tga
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