Gymnodraco acuticeps: 117535774
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Entry
117535774 CDS
T09661
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03030
DNA replication
gacu03410
Base excision repair
gacu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117535774 (pole)
03410 Base excision repair
117535774 (pole)
03420 Nucleotide excision repair
117535774 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gacu03032
]
117535774 (pole)
03400 DNA repair and recombination proteins [BR:
gacu03400
]
117535774 (pole)
Enzymes [BR:
gacu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117535774 (pole)
DNA replication proteins [BR:
gacu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
117535774 (pole)
DNA repair and recombination proteins [BR:
gacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
117535774 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
117535774
NCBI-ProteinID:
XP_034056211
UniProt:
A0A6P8SZE0
LinkDB
All DBs
Position
Unknown
AA seq
2292 aa
AA seq
DB search
MVFQNNGRYKNERGQGRGEQDNQDDGSSALKRLERSQFTDEMDARFGFDRIKEPGEKTGW
LINMHPTEILDDDKRMISAVDYYFIQEDGSRFKVALPFKPYFYIATKKNCEREVISYLTR
KFQGKVTKLEVIPKEDLDLPNHLVGLKRSYIKLSFSTVDELMKIKREISPAVRKNREKEQ
SNDSYTSMLSSALSGGNVNTAEEDGPSKRISDQLDNIVDMREYDVPYHMRLSIDLKIHVA
HWYNVRYRGSAYHPEIIRRDDLVERPDPVVLAYDIETTKLPLKFPDAESDQIMMISYMID
GQGYLITNREIVSDDIDDFEFTPKPEYEGPFTVFNEEDEAALIRRFFDHVQETKPNIFVT
YNGDFFDWPFVETRAALHGLDMYKEIGFQKDNQGEYKSTQAIHMDCYRWVKRDSYLPMGS
HNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQDQVFNKMTGDGHVMDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTIRHAIEEEEKIPLDQVTNFNEVCE
DIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAVVDEATCAACDFNKHGA
TCQRKMAWQWRGEIMPASRSEFHRIQQQLESEKFPPYFPNGPPRAFHSLNREEQAKHEKK
RLADYCKRAYKKTHVTKLEERTTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSA
AQESGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGAN
IITQARELVEQIGRPLELDTDGIWCVLPNTFPENFVIKTNNEKKPKVTISYPGAMLNIMV
KEGFTNDQYHELVDPATLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEIKRRGELQLIKIFQSSVFEAFLKGTNLEEVYASVAKVADYWLDVLYSKA
ANMPDQELFELVSENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVIS
RKPEGAPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSIHDFDIRSILDWNYYIERLSSAI
QKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVFKQKKISELFTSEGKRQVAHQPLA
AGQTADIEDFGMPPRPLQPAILISTKRKRASQAEESQVESQDVELTQSWREILGAPPAVG
NSREEILVWLRYHKKKWELQLRQRKERKKRRRLLDGEAQPVGGGVIRDQGPTGGLGSFLR
KTARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGAT
YKKVNRMLPRSNIVYFLYEYSVPEDMYLKHINEINADLSAPDIEGVYETQVPLLFRALVQ
LGCVCMVNKHVVRDMAGREADTFDLENLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKALF
GLFIPSQRKASIFILDTVRTNQMPNLTNLYTAERIALLEKTSEELLPPEKHNFEVRAEND
PKAIYRALQRILLNYKEERRGPTLIAVQSNWELRRLAAGMPVLEEFPVVPVHVVDEISYN
VLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKH
NHLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTIL
QSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSMVV
GWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVSEFKRLG
STVVYGNFNRIMLCTKKRRIDDAISYVEYITNSIHSREIFHSLSISFSRCWEFLMWMDPS
NFSGVKGKLPSSLMSGEDGAKQKKKSRGEGDEEGSEDEEEDPVEEDDGDGETDEVEELIE
SNWNIMQYLPETASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGGTPVKRRGGSQATQQA
VGDLSALPGMIVFSQEYVSSELTQNFFTITQKIQKKVTGTRGVNQPSEMFPVLPGSHLLL
NNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSMQAQFSDPCNSYILPEVI
CHQCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQTQYDTESIEMALVEALQKKMMSYTLQ
DLVCTKCKGVKEANMPLYCKCAGDFILTFSAKSLFDQITVFRNIASHYSMSYLGETIDWL
LVMSPQISQSAL
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atggtttttcaaaacaatggtcggtacaaaaacgagcgaggacaaggtcggggagaacag
gacaatcaggacgatggatcctcggccctcaagcgtctggagcgcagccagttcaccgac
gagatggacgcccgctttggtttcgacaggattaaagagccaggggagaaaacaggctgg
ctgatcaacatgcatcctactgaaatcctggatgatgacaagaggatgatcagtgctgtg
gactattatttcatacaggaggatggaagcaggttcaaggtggccctccctttcaagcca
tacttttacatcgccactaaaaagaattgcgaaagagaagttatctcatacttaacgagg
aagtttcaaggaaaggtgacgaagcttgaagtcatcccaaaagaggacctcgacctgccg
aaccatctggttggactgaagcgaagctacatcaagctgtccttcagcaccgtggacgag
ctcatgaagatcaagcgtgagatctcaccagcagtacgcaagaacagagagaaggagcag
tccaatgactcctacacctccatgttatcaagtgccttatcaggtggaaatgtgaacaca
gcagaggaagacgggccgtcaaagcgtatctcagaccagttagacaacatagtggacatg
agagagtatgatgtgccatatcatatgcggttgtccatcgaccttaagatccacgtggct
cactggtacaatgttcgctacagaggcagcgcttaccacccagagatcatacgcagagat
gatcttgtggagagaccagaccctgttgttttggcttatgacatcgagaccaccaaactc
ccactgaagttcccggatgcagagagcgatcagatcatgatgatctcctacatgattgat
ggacaggggtatttaatcacaaaccgagagatcgtctctgacgacattgacgattttgag
ttcactcccaaacctgaatatgaagggcctttcactgttttcaacgaggaggatgaggcg
gctctcatccggagattctttgatcacgttcaagaaaccaaaccaaacatctttgtgacc
tacaatggagacttctttgactggccttttgttgagacccgagctgctctccatggactc
gacatgtacaaggagattggtttccagaaagataaccagggagagtacaaatccacgcaa
gccatccacatggactgctacaggtgggtaaagagagacagctacctgccgatgggaagt
cataatctgaaggcagcagcgaaagctaaactgggctacgaccccgtggagctggacccg
gaggatatgtgtcgcatggccactgagcagccacagactttagccacctactctgtgtcg
gacgctgtggccacgtattacctctacatgaaatacgttcaccccttcatcttcgctctg
tgcaccatcatccccatggagcccgacgaggtgctgcgtaaaggctctgggacgctgtgc
gaggccttgctcatggttcaggccttccacgcaaacatcgttttccccaacaagcaggat
caggtgttcaacaaaatgaccggcgacggccacgtcatggactctgagacctacgtgggc
ggccacgtggaggcgctggagtcaggagttttccgcagtgacatcccttgccgtttcaaa
atgaacccggccgcgtttgacttccttctgcaaagagttgagagaaccattcgtcacgcc
attgaggaagaggagaaaatccctttggatcaggtcaccaactttaatgaggtttgtgag
gatatcaaaaagaagctgatatccttaaaggaggtcccaaacaggattgaatgccccctc
atctaccatctggacgttggggctatgtaccccaatatcatcctcaccaaccgcctgcag
ccgtccgccgtagttgatgaggccacttgtgccgcctgtgactttaacaagcatggtgcc
acctgccagaggaaaatggcctggcagtggagaggggagatcatgcctgccagccgcagt
gagtttcaccgaatccagcagcaactcgaatctgagaagttcccgccctatttccccaac
ggcccacctcgggccttccactctctcaacagggaggagcaggccaaacacgagaagaaa
cgtctggcagactactgtaagagggcctacaagaagacacacgtcaccaagctggaagag
cgcaccaccaccatctgtcagagagagaactccttctacgtcgacaccgtgagagctttc
agagatcgtcgctacgaattcaaaggactccacaaggtgtggaagaagaaactgtcggct
gctcaggagagcggagacgctgctgaggtgaagcgctgcaaaaacatggagatcctgtac
gattctcttcagctggctcacaagtgtattctcaactctttctacggctacgtcatgagg
aaaggggcgcgctggtactccatggagatggctggcattgtgtgctttactggagccaac
atcatcactcaggccagagagcttgtcgaacaaatagggaggcccctggagttggacact
gacgggatctggtgtgtcctccccaacaccttccccgagaactttgtgattaaaaccaac
aatgagaagaagcccaaggtgaccatctcctaccccggagccatgctgaacatcatggtg
aaggagggattcaccaacgatcagtaccacgagctggtcgaccccgcgaccctcacttac
gaaaccagggccgagaacagcatcttctttgaggtggacggaccgtacctggccatgatc
ctgcccgcatccaaggaggaagggaagaagctgaagaaaaggtacgctgtgtttaatgag
gacggctccctggctgagctgaagggtttcgaaattaagagacgaggagagctgcagctc
attaagattttccagtcgtcagtgtttgaggctttcctcaaaggcaccaatctggaggag
gtgtacgcctctgtggccaaagtggctgactactggctggacgttctgtacagcaaggct
gccaacatgccagaccaggagctgtttgaactggtttctgagaatcgttcgatgtccaga
aagctggaggactacggagagcagaagtccacctccatcagcacagctaagagactggcg
gagttcctgggagaccagatggtgaaagatgctggtctgagctgtcgctacgtcatctcc
cggaaacctgagggtgcgcctgtcacagagagagccattcctctggccatcttccaggcg
gagcccagtgtgaagaagcatttccttcgtaagtggctgaagatgcccagcattcatgac
tttgacatccgctcgatccttgattggaattattacatagagaggttgagtagtgccatc
cagaaaatcatcaccatccctgcagctcttcaacaggtgaagaatccggtacccagagtg
aggcaccctgactggctgcacaagaaacttctggagaaaaatgatgtcttcaagcagaag
aaaatcagtgagctgttcaccagcgagggcaagagacaggtggcccatcagcctctggca
gcaggtcaaaccgcggacatagaggactttgggatgccccccagacctctgcagccggcc
attctcatcagcaccaagcgcaaacgggcgtctcaggcagaggagagccaagtggagtcg
caggatgtggagctcactcagtcctggagggagatcctgggggcgcccccggctgtggga
aactcacgggaggagatcctggtgtggctgcggtaccataagaagaagtgggagctgcag
ctgaggcagaggaaggagagaaagaagaggaggaggctgctggatggtgaagctcaaccc
gtgggggggggagtgatccgggatcagggccccaccggcggcctggggagcttcctccgc
aaaacagcacgcagcatcctggacatgccatggcagattgtgcagattgcagagaccagt
caccccggcctgtacaagctgtgggctgtgattggaaacgacctccactgcatgaagctc
aacatcccacgtgtcttctatgtcaatcagaaagtcccaaaacaggaggagggggccacc
tacaaaaaggtgaaccgcatgctgcctcgctccaacatagtgtacttcctttatgagtac
agtgtaccagaagacatgtacctgaagcacatcaacgagatcaacgctgacctctcggcc
cccgacatcgaaggagtctatgaaacacaggtcccgttgctgtttcgtgcgctggtgcag
ctcggatgtgtgtgtatggtgaataaacatgtggtgagggatatggctggcagggaggcg
gacacctttgacctggagaatctggagatgaggtctctggcccagttcagctacctggag
cctgggagtgttcgccacatgtacctgtatcatcacagtcagggtcacaaggctctgttt
ggcctcttcatcccctcgcagcgcaaagccagcatcttcatcctggacacagtcaggacc
aaccagatgcccaacctgactaacctctacacagctgaacgcattgctctcctggagaag
accagcgaggagctcctgcctccagagaaacacaactttgaggtccgcgctgaaaacgat
ccaaaggctatttaccgtgcactgcaacgcattctgctaaactacaaggaggagcgtcgc
gggcccaccctcatcgcagtgcagtcaaactgggagttgaggcggttggcagcagggatg
ccggtgcttgaggagtttccagtggttcccgtacatgtggttgatgagatcagctataac
gtgctggactggcagcgccacggtgcccggcgcatgatccgccactacctcaacctggac
agctgcctgtcacaggccttcgacatggcgaggtattaccacttacctgtggggaacttg
cctcaggatgtgtccatctttggctcagatctgttcctggcacgacatctgaggaaacac
aaccacctgctgtggctctcccccaccgccaggccagatctgggaggaaaagaggccgat
gacagtcgtctggtgatggaaagtgatgacaggggctcggtggagatcaatgctcaagga
tgctattccacagtgtgtgtggagttggacctgcagagccttgcggtgaacaccatcctc
caatcacaacatgtcaacgacatggagggcggggctagcttgggtgtcagttttgatgtg
atccagcaggcctcgttggaggacatgatgtcagggaaccagggagccagcgctctggcc
agctatgatgagacggctctctgctccaacaccttcaggatcttgaagagcatggtggtt
gggtgggtcagagagatcacacagtaccacaacgtgtatgcagacaaccaggtgatgcac
ttctaccgctggctgcgctcccccagctctctgctctacgaccccgccctgcaccgcacc
ctgcacaacatgatgaagaaggtgtttctacagttggtttcagagttcaaacgtctcggc
tccactgtggtgtacggaaacttcaacaggatcatgttgtgcactaaaaaacggaggata
gatgatgccattagttatgtggagtacatcaccaacagcatccactccagagaaatcttc
cactctctgtccatctccttctcccgatgctgggagttcctgatgtggatggatccgtca
aacttcagcggtgtgaagggcaaactgccctccagcctcatgagcggagaggacggagcc
aaacagaagaaaaagagccgaggagagggagatgaggaaggcagtgaggatgaggaggag
gatccagttgaggaagatgatggtgatggcgagacagatgaagtggaggagctcattgag
agcaactggaacatcatgcagtatctccctgaaactgcctcctgtcagaaatacttcctc
atgattgtctccgcctacattgcagcagtgtaccacagcatgaaagaggagctgagacgc
aacgctcctggaggcacgccggtcaagaggcgtggaggcagccaggctacccagcaggcc
gtgggggacttgagtgcccttcctggaatgatcgtcttctcccaggaatacgtgtccagt
gagctgacacagaactttttcaccatcactcaaaaaatccagaagaaggtgacgggtacc
aggggggtcaaccagccctctgagatgttccccgtcctgcctggatcccacctgcttctc
aacaacccagcactggagttcatcaaatacgtctgccaggtcctgtcactggatgccaac
atagtgaaccaggtgaacaagctgaagagagacctcctgcgtctcgtggacgtcggagag
ttttcaatgcaagcccagttcagtgacccgtgtaactcctacatcctgccagaggtcatc
tgccaccaatgcaatttctgtcgtgacctcgacctctgcaaggacccatctgtggcacag
gatgggtccgtcttgcctcagtggttctgctcaaactgccagacgcagtatgacactgag
tctattgagatggctctggtggaagctctgcagaagaaaatgatgagctacacactgcag
gatctggtgtgcaccaaatgtaaaggagtgaaggaagcaaacatgccgctgtactgcaaa
tgtgccggagacttcatcctcaccttctcagccaagagcctctttgatcagatcacggtg
tttcggaatatcgcatcccactacagcatgagctacctgggggagacgatcgactggctg
ctcgtcatgagcccacagatcagccagagtgctctctga
DBGET
integrated database retrieval system
