Gymnodraco acuticeps: 117535824
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Entry
117535824 CDS
T09661
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117535824 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117535824 (gspt1)
03012 Translation factors [BR:
gacu03012
]
117535824 (gspt1)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117535824 (gspt1)
Translation factors [BR:
gacu03012
]
Eukaryotic type
Release factors
117535824 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
117535824
NCBI-ProteinID:
XP_034056303
UniProt:
A0A6P8SZ24
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MDPRDTAPDSWELEEEDAEALAVAADLQASFAALNVNAKPFVPNVNAAVFVPSFFQASPA
ETPAPVAAPDPVASMEVAETAGMKPHCSVAAPVENGSSEAKMTTEEETWEQKEEPGGGGG
GGGGGGGGGEEDLVPGGACEEGAARIEEEEEMMEEEEEEMPMPKVAPAPPNAPKKEHVNV
VFIGHVDAGKSTIGGQIMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKG
KTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKG
GQTREHAMLAKTAGVKHLIVLVNKMDDPTVNWSLDRYEECKEKLVPFLKKVGFNPKKDIY
FMPCSGLTGANLKDPLTECLWYTGMPFISHLDSLPNFTRSNDGPVRLPIVDKYKDMGTVI
LGKLESGCISKAQQLIMMPNRHTVEVLSLLSDDVETDDATPGENLKLRLKGIEEEEILPG
FILCSPDNICHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQISALICLVDKKSG
EKSKVRPRFVKQDQVCIARLRAAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPE
KD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcatgggagctggaggaggaggatgccgaggcc
ctggctgttgctgcggatcttcaggcctcatttgccgcccttaacgttaatgccaagccg
tttgtccccaacgtgaacgccgcggtgtttgtgccgagcttctttcaagcaagccccgca
gagacaccagcgccagtcgcggcccctgatccagtagccagcatggaggtggcagaaaca
gccggtatgaagccacactgttcagttgcagctccggtggagaacggaagctcagaggcc
aagatgaccacagaggaggagacgtgggagcagaaggaggagcctggaggtggaggagga
ggtggaggaggaggaggaggaggaggagaggaagatctggtaccaggaggagcctgcgaa
gagggagcggccaggatcgaagaagaagaggagatgatggaggaggaagaggaggagatg
ccgatgcccaaagtggctccggcaccaccaaatgccccgaagaaggaacatgtgaacgtg
gtcttcatcggtcacgtggatgctggaaaatcaactatcggaggacagatcatgtactta
actggaatggtggaaaagcgaaccctggagaaatatgaaagagaggcgaaagagaagaac
agggagacatggtacctgtcgtgggctctggacacaaaccaggaggagagagacaagggg
aagacggtggaggtggggagggcttactttgagacggagaaaaaacatttcaccatcctg
gacgcccccggacacaagagcttcgtccccaacatgatcgggggggcgtcacaagccgac
ctggctgtgctggtgatttcggcgaggaagggggagtttgagacgggctttgagaagggg
gggcagacacgggaacatgccatgctcgctaaaacggccggggtcaaacatctcatcgtc
ctggtgaacaagatggacgaccccacggtcaactggagcctcgacaggtatgaagagtgt
aaggagaagctggttccctttctaaagaaggtgggcttcaaccccaagaaggacatctac
tttatgccttgctccggactcacaggtgccaacctcaaagaccccctcacagaatgcctc
tggtacacgggtatgccatttatttcccacctggacagtttgccaaacttcaccagatcc
aacgacggaccggtgagactacccatcgtagacaagtacaaggacatgggcacagtgatc
ctggggaagctggagtcggggtgcatcagtaaagcgcagcagctcatcatgatgcccaac
aggcacacagtggaggtcctcagtctgctgagtgacgatgtggagacggacgatgcgact
cccggggagaatctgaagctgaggctgaagggcatcgaggaggaggagatcctgccgggg
ttcatcctctgcagccccgacaacatctgccactccggacgcaccttcgacgcacagatc
gtcatcattgagcacaagtcaatcatttgtcccggttacaacgcagtccttcacatccac
acctgcatcgaggaagtgcagatctcagccttaatctgtctggtggataagaagtcgggg
gagaaaagcaaagtccgaccgcgcttcgtgaagcaggaccaggtgtgcatcgcccggctg
agagcggcaggaaccatctgcttagagaccttcaaagacttccctcagatgggacggttc
acactgagggacgagggtaaaaccatcgccatcggcaaagtgctgaagctggtcccagag
aaggactaa
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