Gymnodraco acuticeps: 117535945
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Entry
117535945 CDS
T09661
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6A protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117535945
03036 Chromosome and associated proteins [BR:
gacu03036
]
117535945
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117535945
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117535945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_1
RRM_occluded
Mal_decarbox_Al
Motif
Other DBs
NCBI-GeneID:
117535945
NCBI-ProteinID:
XP_034056514
UniProt:
A0A6P8SZC6
LinkDB
All DBs
Position
Unknown
AA seq
1884 aa
AA seq
DB search
MAPIRDSVSHSPNQTGLEHPGLDSQYEPSPWSSGSPCSGDGNTNWGKVLVDGSTDKPNNP
SSTNSSVWPPSSSSFSCSSSSSSSGCGSGSDPELASECMDADSSSSIGSEKNLAAVTTVM
MMSANAPSSVSSTASSPSSMVTSDMMVGVSVNGDSNGNSRQIIGGGMGGIGGANNGNNNL
TGSSHYSAAGSSSIGSNNMGNHNKPVNNSGVWGSSMISGGSTPCINGGLNPNTLNPNANH
GAWPQNPSPVSQGQRPPQAQGMKLGIAPQQGPTLGWGGMVAPNNSSTMEDTEVNNGTASS
KVLESSNSANGGLQLTNLNTESNGPNNTMMNTTTTTTNATMTSSPPNSTASPQLSGDCSW
GSIGGGNVGPLANGNPISATQHPKGELGGPGTFGTPWGATTYPGEKGPLNADTVNPQNPA
LMQAGNPQISSTAAYKSNNNHNNTGAPHWDQGPANNPNQPQSNSWGNQIQGSAGQTPGNG
NQTTMGPPAEIPRPWGSSASSSSSSSSSTTSNNKMPNGEWGTTAPGINQSDAGSHKGSSA
NNGWKSLEDDAMGVGGGGSXGVGGGVGGGVGVGGSHALGSVTGGWGRSGGSEGSGESSGG
RSSADRDQSKGGIHRTVIPPGPVVSAVPPVDVDPRVLSNTGWGQTPVRQNTSWDVNSPVN
RQVPRGDERKQSSGGPGWGTATPAAPSQTSGGWGGGPGNSGPGPGPGGSGWGERQNSSWD
NKAPANGGGGQSSWNDGSGYKGGNNNSNTWSNNTNKDDRSNTWTNAPKPQQQGWGSQSGH
GREGWGHGGDGPRAGGNNHWEGRERDSDSNRSGSGCWNEQSRTNTSGGGNTWAGGGGSNT
PERSTQNPGSNWGDSNPQKPNPQGHSQGWVEPAKNNQNWSEHNPKPANEWGKAPEANMSR
GNPPPTKPAGWQGGPIPAAVQKEETSSGWEEPSPESVRRRNEIDDGTAAWGEPAAKHGVG
AGNMWSKTRQSEHEAASQPPQHQPHPPRSVMHPPPPVQPMAQDKSCNSWGEPYAKKKESS
TWEPPAPPPVKVDNGTSAWGKPMETNSTWEEPGRDKRDSAAPGWSGQHKPVAPGPKPMET
WGGGEGNSWDQEEEVEIGMWSNSQQDNRSHDQNTWSYKHKVSSKMNKPVSKQDEPWMRPF
VNQFNSMNFSRDSPDDSMKTGAGMVQDKRMDMGGMGDYNGGMGKNPGSRHQLHKDSPMDR
SSYYDKLSVSPSAYNNAAPDELSSNQSMSFSSSNSAQPFTCLESGPSPAHLSPGGARQNV
NPMMGGSSVAQGRGGPQSQIPPQPNLRNQVPPPILPPQVPPSLLKYPGGNGGLNPLFGPQ
QVAVLNQLSQLNQLSQLSQINQLQRLLLQQQQQQQQQKAQSHRPMPVGRPSEQTRPIGSS
PSMMQPPRHLDPSMMKPPPPHKPYMDNYMSHNAPDMQKDASSLGSFSNFPLSLNSNMNVP
LDMGVGGGSGGGAVCYKEPPQSRMKKLWSTDPLEQDSKSGAMSSGLRLEDSPFYNFLSPG
PSPLSPPGQSMGSVGDGWPPRANSPLPPGNTVTWPPEFRPGEPWKGYPNIDPETDPYVTP
GSVINNLSINTVRDTDHLRDRNNGPSSSLNTTMPSNSAWSSIRASSHSGSLTSTAQSTSA
RPSESKWSPGGGSVSNSSLAHELWKVPLPPKALAVAAPSRPPPGLTSQKPSSASSGWDSS
SLRLGGWGSTESRYTPGSSWGDSSSSSSGRSQWLVLKNLTPQIDGSTLRTLCMQHGPLIT
FHLNLPHGNAVVCYSSKDEAAKAQKSLHMCVLGNTTILAEFASEEEINRFFAQGQSLATP
SSSWQAIGSSQSRMDQSHPFPSRAPEPTQWNSSDLHSSSLWGGPNYSSSLWGNPSGTEGG
RISSPSPISSFLPVDHLSGGGDSM
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggctcccattcgggattccgtcagccactcccctaatcaaacaggtctggagcaccct
ggcttggactcgcagtatgagccttccccctggtcctctggctctccctgcagcggtgac
ggcaacaccaactggggcaaagtcctagtggacggaagcaccgacaaacccaacaaccct
tcttcaaccaactcttccgtctggcctccgtcttcttcctcgttctcttgctcctcgtct
tcttcctcttctggctgtgggtcaggatcggacccagagttggcgtcagaatgcatggac
gcagattctagctcctcgatcggctcggagaaaaacctcgccgctgtgacgacagtgatg
atgatgtcagcaaatgctccttcctctgtgtcttctacagcttcttctccctcctctatg
gtgacttccgacatgatggtcggcgtttcggtgaacggagacagcaacggcaacagtcgt
cagataatcggcggagggatgggaggcatcggcggtgcaaataatggaaataataacctc
accgggtcctcccactactccgcggctgggtccagcagtattggcagcaataacatgggc
aaccacaacaagcccgtcaataacagtggtgtctggggcagcagcatgatctctggagga
agcaccccctgcatcaatggagggttgaacccaaacactttaaacccaaatgccaaccat
ggtgcctggccacagaatccaagcccagtgtcccagggccaaagacctcctcaggctcag
gggatgaaactgggtatagctccccagcagggccccacgcttggctggggcggcatggta
gctcccaacaacagcagtacgatggaagacaccgaggtgaataatggtacagcaagcagc
aaggtgttagaaagcagcaacagtgcaaatggtggcctacagctgaccaaccttaacact
gaatccaatggaccaaataacactatgatgaatactactactactactactaacgccaca
atgacctctagtccaccaaactctacagcctcaccccaactcagcggggattgttcctgg
ggctctattggaggagggaacgtgggtccgctggcgaatggaaaccccatatcagccacc
cagcaccccaaaggagagctgggaggtcctgggaccttcggtacgccttggggcgcaact
acctaccctggtgaaaagggccccctaaatgcagacactgtgaacccacaaaaccctgcc
ttaatgcaggccgggaacccccaaatatcctctactgctgcttacaagagtaataataac
cacaataacactggggccccgcactgggaccaggggcctgccaataacccaaaccagcct
cagagcaactcctggggtaatcaaatccaaggctctgcaggccaaacgccaggaaatggg
aaccaaactacgatgggccctccagcagagataccccggccctgggggagcagcgcgtct
tcttcctcttcctcatcgtcctctaccacatccaacaacaagatgccgaatggagaatgg
ggaacgacagctcctggtatcaaccaatcagatgctggaagtcataaaggaagctctgcc
aacaatggctggaagagcttggaggatgacgccatgggagtaggagggggggggagtnna
ggagtaggagggggagtaggagggggagtaggagtaggaggaagtcacgccttagggagc
gtcactggaggctggggccgctctggaggaagtgagggaagcggagagagctccggaggc
cgatccagcgccgacagagaccagtcaaaagggggaatccacagaacggttatccctcct
gggccagtagtatcggctgtgcccccggtcgacgtggacccgagagtcctttccaacact
ggatggggacagacacccgttcgacagaacacctcctgggatgtcaactctcccgttaat
agacaagttcctagaggtgacgaaagaaagcaaagcagcggaggccccggatggggcaca
gcaacaccggcagctccctcccagacctccggaggttggggtggtgggcccggcaactca
ggtccaggtccaggtccaggaggctctggctggggcgagcgacaaaactctagttgggac
aataaagccccagcaaacggaggaggtgggcagagcagctggaacgatggatccggctac
aagggtggcaacaacaacagtaacacttggagcaataacaccaacaaagacgacagatcc
aatacctggactaatgcgcccaaaccgcagcagcaaggctggggttcgcagagtggacat
ggaagggagggctggggtcacggtggagatggacccagagcagggggcaacaaccactgg
gaggggcgggagagggatagcgacagcaaccgctcaggctccggatgttggaacgagcag
agccgaaccaacaccagcggcggcggcaacacctgggcgggcggcggaggatcaaatact
ccagaacggagcacccagaacccaggctccaactggggcgactcaaaccctcagaaaccc
aaccctcagggtcacagccagggctgggtcgagcccgcaaagaacaaccagaactggagt
gagcacaatccaaagcccgccaacgagtgggggaaagctcctgaagccaacatgtcccga
ggcaatccaccccccaccaagcccgcaggctggcaaggaggcccaattcccgcagcagtt
cagaaggaggaaacttcatctgggtgggaagagccttctcctgagtctgttcgcagaagg
aatgagatcgatgatgggacagcagcttggggagaaccagccgctaaacacggcgttgga
gctggcaacatgtggagcaagaccagacaatcagagcatgaggctgcgagtcagccccct
cagcaccagccccacccgcctcgcagcgtcatgcatcctcctccgcccgtgcagcctatg
gcccaggacaaaagctgtaatagttggggtgagccgtacgccaagaagaaggagtcctcg
acgtgggagcctcccgctcctccacctgtaaaagtggacaacgggacgtctgcctggggg
aaacccatggagaccaactccacctgggaggagcccggccgagataagagagactccgct
gcgcctggatggagcggacagcacaagcctgtagctccaggtcccaagcccatggagacg
tggggagggggggagggcaacagctgggaccaggaagaggaggtggagatcggcatgtgg
agcaacagccaacaggacaacagatcccacgaccaaaacacctggagctacaagcataaa
gtgtccagcaagatgaacaaaccagtcagcaaacaggatgagccctggatgaggccgttc
gtcaaccagttcaacagcatgaacttctctagagactctcctgacgactccatgaagacg
ggagcaggcatggtgcaggacaagcgtatggacatgggcggcatgggagactacaatgga
gggatggggaagaaccccgggtctcgccaccagctccacaaggactctcccatggaccgc
agctcttactatgacaagctgtccgtttccccctctgcttacaataacgcggctcctgac
gagctctcctccaatcaaagcatgagcttttcctcttccaattctgctcagcctttcacc
tgcctcgaatctgggccatctcccgcccacttgagtcctgggggcgctcggcagaatgta
aaccctatgatgggtggcagcagcgtagcacagggccgaggcggcccccagtcgcagatc
cccccccaacccaacctccgcaaccaagtgcctccacccatcctgccccctcaggtgcct
ccatccctgttgaagtacccgggaggtaacggaggtctgaaccctctgttcggccctcag
caggtcgctgtgctcaaccaactctcccagctcaaccagctgtcacagctcagccagatc
aaccagttacagcgtcttctcctccagcagcagcagcagcagcagcagcagaaagctcag
agccatagacccatgcctgtgggacgacccagtgaacagactcgtcctattggttcgtct
ccgtcgatgatgcagccgcctcgccacctggacccctccatgatgaaaccgcctccacca
cacaaaccctacatggataactacatgtcccacaatgcccctgacatgcagaaggatgct
tcttctcttggatccttcagcaacttccctttaagcttgaactctaacatgaatgtaccc
ctggacatgggtgttggtggaggtagtggcggcggagctgtgtgctacaaagagccgccc
cagtccagaatgaagaaactttggtctactgaccctctggagcaggacagcaaatctggt
gctatgtcgtctgggctgcgtctggaggactctcccttctacaacttcctgtctcctggc
ccgtctcccctgagtcctcccggccaatcaatgggctcggtgggagatggctggccaccc
cgtgccaactcccccctgccccctggaaacactgtcacctggcccccagagttccgaccc
ggggagccctggaaaggttaccccaacattgaccctgagaccgacccctatgtgaccccc
ggcagtgtcatcaacaacctctccatcaacaccgtccgcgacacagaccacctcagggac
aggaacaacgggccatcctcatcactgaacaccacgatgccttctaacagtgcctggtca
tccattcgtgcctccagccacagcggttccctcaccagtacagcacaaagcacttcagcc
agacccagtgagtcgaagtggtctcccggcggcggctctgtgtccaactcctccctggcc
cacgagctgtggaaggtccccctgccccccaaggcgctggctgtggcggctccttccaga
cctccacccggcctcaccagccagaagcccagctccgcctcctccggctgggacagctct
tccctgaggctgggggggtggggctccacagagtccagatacacacctggttccagttgg
ggcgatagcagcagcagcagctcagggagatcccaatggctcgttctgaaaaatctcaca
cctcagattgacggctctaccctgaggactttgtgcatgcagcacggccctctgatcaca
ttccacctcaacctgccacacggtaacgctgtggtctgctacagctccaaggatgaggcc
gctaaggcccagaagagcctgcacatgtgtgttttggggaacactaccattctggccgag
tttgccagcgaggaggaaatcaaccgtttctttgcacaagggcagtcactggccactccc
tcctccagctggcaagccatcggctcctctcagagcagaatggatcagtctcacccgttc
cccagccgcgctcctgagcccacccagtggaacagcagcgacctccacagctcctccctc
tggggcgggcccaactattccagtagcctgtgggggaatcccagcggcaccgaggggggg
aggatcagcagcccttctccaatcagctccttcctcccagtggatcacctgtcaggggga
ggggactccatgtga
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integrated database retrieval system
