Gymnodraco acuticeps: 117536111
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Entry
117536111 CDS
T09661
Symbol
dcp1b
Name
(RefSeq) LOW QUALITY PROTEIN: mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117536111 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117536111 (dcp1b)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117536111 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
117536111 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
117536111
NCBI-ProteinID:
XP_034056734
UniProt:
A0A6P8SZX1
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MTATSAGSSSCLTAKGLDISLAALQRQDPYINDIVDVASQVALYTYNNRANEWEKTEVEG
TLFIYTRLASPRHGFTIMNRLSMENLTEPITKDLDFQLQHPFLLYRNARLVIHGIWFYDK
EDCQRIAQRMKILTQQEQTLAQSQGGWLSPGGRGGVIGGGVLGGVLGGVVGEVRVGGSEA
KSVDIIQMLTKARTEYDKSSSEPKEIGGSNVIYGNPNLIKPIPVKPIIQDGDSAAPKPLS
LATLFGSQKQHSPKPEPVSPLASPGTRPSTGKFTRPPVARSLKYDDSVNKSVPNQGVNVA
MVACSDGALRAVIGEHGGNVVGLLPNPTGAHHHPQQQQQQQQHHPQQEQQQQHCPAIQKL
MQGQRGVGVVGGVLQTVSESPENRLCDNGVPLDHHHHHMYHHLHQQQHLHHQQLQQQQQL
QQQLQADPIKRLFQTQQPLPFSLPPLQQSPHLPPQPGMGGPVSCSHLQAQPSQQLFYSQA
APSVQAAGLLPSQVSNDQVLHPLQGLSSQMAGVVSPHELLQKLQLVQQEQASPDPPRPSP
GLAPRFLGPTQGPGVGPVVGQIQAPATAGQKAALQFQVISPQRILATVAPNLLLSPSMFT
QAKSSGGLSAGSQENCLAPPSVCRPXPPPLQQEGRVLSRSQLQATMLHLIQSDGSFLDSI
YEAYISRFANDSSSKY
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgacagctacttcagccgggagcagtagctgcctcaccgctaaaggactggacatcagt
ctggcagctctgcagcggcaagacccgtacatcaatgacattgtggacgtggccagccaa
gttgccctgtatacttataacaacagggcaaatgagtgggagaagaccgaggttgaaggc
accctatttatctacacaagactggcgtctcccaggcatggtttcaccattatgaacaga
ctcagtatggagaacttgacagagccaatcaccaaagacctggacttccagctgcagcac
cccttcctgctttaccgcaatgcacgattggttatccatggcatttggttctatgataag
gaggactgtcaacgcattgctcagaggatgaagattctgacccagcaggagcagaccctg
gctcagtctcagggtggatggttgtccccaggcggaagaggaggagtcattggaggaggg
gtactaggaggagttctgggaggagtagttggagaagtgagagtgggaggaagtgaagca
aagtctgtggacatcatccagatgttgaccaaagcacgcacagagtatgacaagtcttcg
tcagagccaaaggagattggtggcagcaatgttatttatggaaaccccaacctgatcaaa
cccatacctgttaaacccatcattcaggacggtgacagtgctgcacccaagcctctctct
ctggccactctttttgggtctcagaagcaacactcacctaaacctgagccagtctcccct
ctggcctcgcccgggacaagaccatccacaggaaagttcacccgtcctcctgtagcccgg
tcgctgaaatacgacgattcagtgaacaaaagtgtgcccaaccagggagtgaacgtcgcc
atggttgcgtgttcagatggagcgctcagggctgtgattggagaacatgggggaaatgtg
gtgggattgttgccaaatcctaccggcgcccatcatcatcctcagcagcagcagcagcag
cagcaacatcatcctcagcaggagcagcaacagcagcactgccctgccatccagaaactg
atgcagggacagagaggagtcggggtggtggggggggtgcttcagaccgtctccgaatcc
cccgagaacaggctgtgtgacaacggggtgccgctggaccaccaccatcaccacatgtac
catcatcttcaccaacagcagcaccttcatcaccagcagcttcagcagcaacagcagctt
cagcagcagcttcaagcggaccccatcaagagacttttccaaacccagcaacctctcccc
ttctccctccctcctctgcagcagagcccccatctcccccctcagccagggatggggggt
cccgtgtcgtgttcccaccttcaagcacaaccaagccagcagctgttctacagccaggca
gctccatctgtacaggcagcaggcttgctgccatctcaggtatccaatgaccaagtcctt
catcctttacaaggtttgtcttcccagatggctggagtggtgtctcctcatgagctcctg
cagaagctgcagctggtccagcaggagcaggcttcccctgacccccctcgaccctcccca
ggtctggcccctcgattcctggggcccactcaaggtccaggtgtaggccccgttgtaggc
caaatccaggccccagccactgcgggtcagaaggctgcgctgcagtttcaggtcatctcc
ccccagcggattctagctactgtggcccccaacctgctcctctctcccagtatgttcact
caggcaaagtctagtggcgggttgtcagcggggtcccaggagaactgcctggcccctccc
tctgtctgcagacccnncccccccccgctgcagcaggagggcagagtgctgtccaggagc
cagctgcaagccactatgctgcatctaatccagagtgacggctcattcctggactccatc
tatgaagcctacatcagtcgctttgctaatgactccagcagcaagtactga
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