Gymnodraco acuticeps: 117536434
Help
Entry
117536434 CDS
T09661
Symbol
scaf4a
Name
(RefSeq) LOW QUALITY PROTEIN: SR-related and CTD-associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117536434 (scaf4a)
03041 Spliceosome [BR:
gacu03041
]
117536434 (scaf4a)
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117536434 (scaf4a)
Spliceosome [BR:
gacu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
117536434 (scaf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117536434
NCBI-ProteinID:
XP_034057177
UniProt:
A0A6P8THD6
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MDAVNAFNHELFSLIDTKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIKKCKTEYKI
AGLYVVDSIVRQSRHQFGSDKDVFGPRFTKNITGTFENLCLCPEGDRSKIIRVLNLWQKN
GVFKIEIIQPLLDMAAGSCSAAALLAGSDDPGFSPSPAKEPVTAVTANSTMTSTSQLQNS
DAFAAVAQLFQSTQGQQLQQMLQTFQQQPAKPETNTSVHTIQTQAQHITTGLGMAPLQPP
QPTQTAQQKAAFDKKLLDRFDYDDEPDFGEEAKKDEMSTQPSFMQNPPGFPQHMEHFKPP
MLNMLQDVSQQVPLPPNGQLQAYGLPPAQSFPGMVPHMGHALPGQSPPGSAGPPGFPGGY
PPHNAAHKPEVLMDLDHSSSRDGRHGRRSHSGSRSPKRRRSRSNSRTRRSRHRRSRSRDR
RHHSPSARSQDHKEREKERERRQKGLPPPKGETLSICSTTLWVGQLDKRTQQQDVACLLE
EFGQIDSINMIPPRGCAYIVMIHRQDAFKALQKLSRGSHKVNQKTIKIAWALNKGIKADF
KQYWNVELGVTYIPWSKIREAQLEELKEGGILDSDTLSPEWSEARKTIGIQEEVTHNGCS
EPQPPQETQVLPVAAVPHAQVPPMQQPVVGVGSLQPPGFSGPLGMPPHSFPPGVLPPHFI
RPGFNPMQMPPGFHPPGAMPHHGLPPHSKGGVEDPSMDPAGLGNRNSDEFPDGHNIFNNQ
MGPMGGPPGVLPGIIQPPSGGLLGARPGIMPLQRPPVPTPPHMQRFPPPHGQRPPHPNMP
HMLPQMMPRGPHPQMMHPDAPPLKGGFGMLLPPNMRPPFPPHGHGPPPHGPPPHGPPPFV
RPGGPRGMEGPEEMDGRQFRGDRPGFRDREPERDWDRDRERERERERDRGFGGGRRPFGD
GGRGGGGGGGGGGDRMEGRDRLGGWQEDGADQRGGXRRRREEEEEEEEEGGWERDRDRDR
DRDRDRDRDRRDWREKRKSLDGDREPGRGEDGEKERGRAEGGDRGRVERGRGAEGKEGDR
PRRRERTSRWDKDDRLADLENTDKQRNSNSTEEPPETPVVTAETSKEPSVAASEKKAESE
LVSPSSEETKAAAEPVPLEPSPPAPSEPTEAAEEAAS
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgtcaacgcctttaaccatgagttattctcattgattgacaccaagccccca
atctctcgggcaaagatgatctccatcacaaaatcggccatcaaagctatgaagctctac
aaacatgtggtccaaattgtggaaaagttcatcaaaaagtgtaagactgagtacaagata
gcgggcctatatgtggtggattccattgttagacagtccagacaccagtttggatcagac
aaggacgtgtttggcccaaggttcaccaaaaacataacgggaacctttgagaacctctgc
ctatgcccagaaggagacaggagtaaaatcatacgggtgttgaacctgtggcagaaaaat
ggagtgttcaagattgagattattcagcctctcctggacatggcagctggctcttgcagt
gctgctgcactcttagcaggctccgatgacccaggtttttccccatctccagccaaagag
ccagttactgcggtaacggcaaactccaccatgacatccacttctcagctgcaaaactct
gacgcctttgctgccgtggctcagcttttccagtccacacagggtcagcagcttcaacag
atgctccagaccttccagcagcagccagcaaagcctgaaacaaacacgtctgtccatacc
attcaaacgcaggcccaacacatcaccactggcctgggcatggcccccctgcaacccccg
cagcccacccaaaccgcccagcagaaggcagcctttgacaagaaattgctggaccgcttt
gactatgatgatgaaccagactttggagaagaggcgaagaaggatgaaatgtcaacacag
ccctccttcatgcagaaccctccaggcttcccacagcacatggagcactttaaacctccg
atgctcaacatgttgcaagacgtctcacaacaggttcctctccctccgaatggccagctc
caggcctacgggttaccgccagcgcaaagcttcccaggtatggtgcctcatatggggcat
gctttgccagggcagtccccccctggttctgctgggcctccaggcttccccgggggatac
cctccccacaatgctgcccataaaccggaagttttaatggatttggaccattcatcttca
agggatggcagacatggtcgacggtcacactcaggctccaggtctccaaagcggaggagg
tcacggtctaattcccgtacacggagatccaggcacagacgatcgcgctccagagaccgg
cgtcaccactcccccagcgctcgctcgcaggaccacaaggagagagagaaggagagagag
cgacggcagaaaggcctcccgccacccaagggcgagacactaagcatttgcagtacaact
ctgtgggtgggccagttggacaagagaacacaacagcaagatgttgcctgtttactggag
gagtttgggcagatagactccatcaatatgatccctccacgtggctgcgcctatattgtt
atgatacatcgacaagatgccttcaaggctctgcagaagctgagcagaggatctcataaa
gtgaaccagaaaaccatcaagattgcttgggctttaaacaagggcataaaggcggatttc
aaacagtactggaacgtggagctgggtgtcacctacataccgtggtctaagatcagagag
gctcagttggaggagctaaaagaaggaggaattctggattcggacaccttatcaccagag
tggagtgaagcgaggaaaactattggcatccaggaggaagtcacacacaacggctgttca
gagccacagccgcctcaggaaacgcaagttctacctgtggctgctgtgcctcatgctcag
gttcctccaatgcagcagccggtggttggtgtgggttccctccagcctccaggtttttct
gggcccttaggcatgcctccccattccttccctccaggcgtcctcccgcctcacttcatc
cgacctggcttcaaccccatgcagatgcctccaggtttccaccccccaggtgccatgcct
catcatggtctcccacctcactccaaaggtggagttgaagacccctctatggacccagca
ggtctgggcaacaggaacagcgacgaattcccggatggtcacaacatcttcaacaaccag
atgggacctatgggtggacctccaggggttcttccaggaatcatccaacccccttctggt
ggtctgctaggcgcacggcccggtataatgccactgcagcgtccgccggttcccactcca
ccacacatgcagcggttccctccaccccacggccagcgaccccctcaccccaacatgcca
catatgctcccacagatgatgcctagaggtccacaccctcaaatgatgcaccctgacgcc
cctccccttaaaggtggctttgggatgcttcttccccccaatatgaggccccctttccct
ccacacgggcacggccctcctcctcacggtcctcctcctcatggtcctcctcctttcgtt
agaccagggggacctcgtggcatggaggggccggaagaaatggatgggagacaattcagg
ggggacaggcctggattcagggacagggagccagagagggactgggatcgggacagggag
agagagagagagagagagagggatcgaggttttggaggtggaaggcgtccctttggtgac
ggagggagaggaggaggaggaggaggaggaggaggaggagatagaatggaaggaagggac
cggctcggaggctggcaggaagacggagcagatcagcgaggagggnggaggaggaggagg
gaggaggaggaggaggaggaggaggagggggggtgggagagggacagagatcgtgataga
gaccgtgatagagaccgcgatcgagacagacgggactggagggagaagcggaaaagcctg
gatggagacagggagccagggaggggggaagatggggagaaggaacgagggagggcggag
ggaggagacagagggagggtagaaagagggagaggagctgaaggaaaagaaggggatagg
ccgaggcggcgagagaggacctcccggtgggacaaggacgaccgattggccgacctggaa
aacacggataaacaaaggaactctaacagcacagaggaacctcctgagactcctgtggtt
accgcggagaccagtaaagaaccaagtgttgccgcttctgaaaaaaaggctgaatctgaa
cttgtatctccgtcctcagaggaaacgaaggctgcagcggagccggttcccctcgagccc
tcacctccggctcccagtgagcccacagaagcggcagaggaagctgcatcatag
DBGET
integrated database retrieval system
