Gymnodraco acuticeps: 117537245
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Entry
117537245 CDS
T09661
Symbol
htt
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117537245 (htt)
04131 Membrane trafficking [BR:
gacu04131
]
117537245 (htt)
03029 Mitochondrial biogenesis [BR:
gacu03029
]
117537245 (htt)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117537245 (htt)
Membrane trafficking [BR:
gacu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117537245 (htt)
Mitochondrial biogenesis [BR:
gacu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
117537245 (htt)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
HEAT_2
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
117537245
NCBI-ProteinID:
XP_034058290
UniProt:
A0A6P8TKH1
LinkDB
All DBs
Position
Unknown
AA seq
3192 aa
AA seq
DB search
MATMEKLMKAFESLKSFQQQQGPPTAEELVQRQKKEQATTKKDRVTHCLTICENIVAQSL
SSGSRTSPEFQKLLGIAMEMFLLCSDDSESDVRMVADECLNKIIKALMDSNLPRLQLELY
KEIKKNGASRSLRAALWRFAELAHLIRPQKCRPYLVNLLPCLSRITKRQEESVQETLAAA
MPKIMSALGHFANDGEIKVLLKSFVANLKSSSPTIRRTAASSAVSVCQHSRRASYFYTWL
LNVLLGLLVPVDEEHPTHLILGVLLTLRYLMPLLQQQVNTSSLKGSFGVTRKEADVQPSP
EQLLQVYELTLHYTQHWDHNVVTASLELLQQMFRTPPPELLHMLITAGSILHGSVFRQDA
ESRARSGSILELIAGGGSSCSPLLLRKPRGKMLSGEEDGLEDDAERTEVTFTASVVGADG
SSATQVDIITEQPRSSQHTLQPGESTDLSASSEQGGGGGTSASDTPESPNDNEEEMLSRS
SSGGANVTPETADYTTPETEAVPLGDGGPLLSTNDRSLPPSDSSQTTTEGPDSAVTPSDV
AELVLDGSESQYSGMQIGTLQDEEDEGAAPSSQEEPQEPFIQSALALSKPHLFDGRGHNR
QGSDSSVDRFIPKDEPAEPEPDVKPSRIKGPIGHYTDQGAEPLVHCVRLLAASFLLTGQK
NGLTPDKEVRVSVKALAVSCIGAAAALHPEAFFNSLYLEPLDGTPVVEQQYISDMLGLAD
HGDPQIRGAIAILCGAIIQAALTKTRYNIHSWLASVQSATGNPLSLVDLLPLLQRTLKDE
SSVTCKMACSAVRHCLMTVCSSTLSELGLQLMIDLLALRDSSYWLVRTELLETLAEMDFR
LVNFLERRTEHLHKGDHHYTGRLCLQDRVLNDLVIRLLGDDDPRVRHVAASAVSRLVSRL
FYDCDQGQVDPVVAIARDQSSVYLQLLMHEAQPPSQFTVSTITRTYRGYNLSNNVSDVTI
ENNLSRVVTAISHAFTSSTSKALTFGCCEALCLLATHFPVCTWSTGWHCGYVSSSSSFSS
RSSLNRSRGRALSVSQTGSAPASSASSSSAPDTERRTLTVGMANMVLSLLSSAWFPLDLA
SHQDALLLSGNLLAAVAPKCMRNPWAGEEEGGSGSTNTSGGPNKMEEPWAGLSERSLVAM
VEQLFSHILKILNICAHVLDDTPPGPAIKATLPSLSNTPSLSPIRRKGKEKDIVEPSAAP
MSPKKSVDINTGRPADGTGSTAVNKSTTVGNFYHLPTYLKLYDVLKATHANYKVTLDLHS
SQEKFGGFLRSALDVLSQLLELTTLHDISKCVEEILSYLKSCFSREPTMATVCVQQLLKT
LFGTNLASQCESVLSGPSRSQGKALRLGSSSLRPGLYHYCFMAPYTHFTQALADASLRNM
VQAEQEQDTSGWFDVMQKASNQLRSNIANATRQRGDKNAIHNHIRLFEPLVIKALKQYTT
STSVALQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIIPNIF
FFLVLLSYERYHSKQIISIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGSNKA
DAGKELETQKEVVVSMLLRLVQHHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMI
SKQQMHLDSPEALGVLNTLFETVAPSSLRPVDMLLKSMFTTPVTMASVGTVQLWVSGILA
VLRVLVSQSTEDIVLSRVHELSLTPHLLSCHTIRRLHQQSPSPSDPPAADTLCSQDGEAQ
KALPEETFARFLLQLVGVLLDDISSRQVKVDITEQQHTFYCQQLGTLLMCLIHVFKSGMF
RRITTAATRLLKGEGGGVQPGAEAGLFYPLEALNSMVQCMITTHPSLVLLWCQVLLIIDY
TNYSWWAEVHQTPRRQSLSCTKLLSPHSSGEGEEEKHETRLAMVNREIVRRGALILFCDY
VCQNLHDSEHLTWLIVNHVQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCDNLS
APTMLKKTLQCLEGIHLSQSGSLLVLYVDKLLNTPFRVLARMVDTLACRRVEMLLAETLQ
NSKAQVPVEELNRIQEYLQTSGLAQRHQRFYSLLDRFRATVTDTCSPTPPVTSHPLDGDP
PPAPELVNADKEWYVALVKSQCCLRGDVSLLETTELLTKLPPADLLNIMSCKEFNLSLLC
PCLSMGMQRCARGQGSLLLETALQVTLERLEGVTGSLPVPHQSFLPPAQPQPYWKQLADV
YDEPGFYPRVLSLCRALSQYLLSVSQLPSSLHIPPDKEHLITSFTCTAAEVVAWRLLQNQ
LPLSVDLQWALSCLCLALQQPCVWNKLSTAEYATHTCSLIYSLRLIIVAVAVSPGDQLLH
PEKKKTRAERDTEGDEVDTAHADHICESQACEIMAELVEGLQSILALGHHRNSAFPAFLT
PTLRNIVISLSRLPLVNSYTRVPPLVWKLGWSPQPGGEYGTTLPEIPVDFLQEKDVFREF
LYRINTLGWSSRTQFEETWATLLGVLVTQPITMDQEEETQQEEDLERTQLNVLAVQAITS
LVLSAMTLPTAGNPAVSCLEQQPRNKTLKALETRFGRKLAVIRGEVEREIQSLVSKRDNV
HTHHPYHAWDPVPSLSAASAAGTLISHEKLLLQINTEREMGNMDYKLGQVSIHSVWLGNN
ITPLREEEWGEDEEDEADTPAPTSPPTSPINSRKHRAGVDIHSCSQFLLELYSQWLIPGS
PSNRRTPTILISEVVRSLLAVSDLFTERNQFDMMFSTLMELQKLHPPEDEILNQYLVPAI
CKAAAVLGMDKAIAEPVCRLLETTLRSTHLPSRMGALHGVLYVLECDLLDDTAKQLIPTI
SEYLLSNLRAIAHCVNLHNQQHVLVMCAVAFYMMENYPLDVGAEFMAGIIQVCGVMVSAS
EDSTPSVIYHCVLRGLERLLLSEQLSRVDGETLVKLSVDRVNMPSPHRAMAALGLMLTCM
YTAVLASGSDVTGVRGQVDCASAEAMGVTAGHVGFSSGKEKASPASRPAHSDPQAPDSES
IIVAMERVSVLFDRIRKGLPSEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQ
FMATVVYKVFQTLHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWIS
ALLPHVISRMGSSEVVDVNLFCLVAMDFYRHQIDEELDRRAFQSVFETVASPGSPYHQLL
GCLQSIHQDTSL
NT seq
9579 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaaattgatgaaggcctttgagtctctgaagtcattccagcagcag
cagggaccaccaaccgctgaggagcttgtccagaggcagaaaaaagaacaggctactacg
aagaaggacagggtcacccactgtctgacaatatgtgaaaacatcgtggctcagtctctg
agttctgggagcagaacgtctccagagtttcagaaactgctgggcatcgctatggagatg
ttcctgctctgcagtgatgacagcgaatcagatgtccggatggtagccgacgagtgcctg
aacaaaatcattaaagcgctgatggactccaacctgcctagactgcagctggagctgtac
aaagaaattaaaaagaatggtgcctctcggagtctgagggcggctctgtggaggtttgcc
gagctcgctcacctcatcagaccacagaaatgcagaccctacctggtgaacctgctgccg
tgcctctcccgaatcaccaagcggcaggaggagagtgtgcaggagactctggctgctgcg
atgcccaagatcatgtccgccttggggcacttcgccaatgacggcgagatcaaggtgctg
ctgaagtcgtttgtggccaacctgaagtccagctccccgaccatcagacgcacagcagcc
agctccgccgtcagcgtgtgccaacactccagacgcgccagctacttctacacctggctc
cttaatgtgctgctgggtctgctggttcccgtggatgaggagcatcccacacacctaatt
ctgggggtcctgttgacccttcgctacctgatgcctctgctgcagcagcaggttaacaca
tccagcctcaaaggaagcttcggagtcacgaggaaggaggccgacgtccagccctcacct
gagcagctcctacaggtgtacgagctgacgttacactacacgcagcactgggatcacaat
gtggtcacagcgtctctggagctcctgcagcagatgttcaggacccccccaccagagctc
ctgcacatgctcatcacagcgggcagcatcctgcatggctccgtgttccggcaggacgca
gagagtcgcgcacgctccggcagcatcctggagctcattgcggggggagggtcttcctgc
agtccactccttcttaggaaaccaagaggtaaaatgctctctggagaggaggacggcttg
gaggatgacgctgagagaacagaggtcacattcacagcgtcagtcgttggtgcggacggc
tcctcggcgacccaggtggacatcataaccgagcagccgcgctcctcccagcataccctg
cagcccggcgagtccacggacctcagtgcctcctcggagcagggcggaggaggcgggact
tcggcttcagacactcctgagtcacccaacgacaacgaggaagaaatgctcagtcgcagc
tccagcggtggggccaacgttaccccagagacggccgactacaccaccccagagacggag
gcagtacccttaggagacggcgggcctttgctcagcacaaacgaccgctcccttccaccc
agcgactcctcgcagaccaccacggaggggccggactcagccgtcaccccttcggatgta
gcagaactggtgctggacggcagtgagagccagtactcagggatgcagatcgggacatta
caggatgaagaagatgaaggagcagcaccttcctcccaggaagagccccaggaacccttc
atccagtcagctctggctctgagcaaacctcatctcttcgacggccgaggccacaaccgg
cagggttcggacagcagcgtggaccgcttcataccaaaggacgagcccgccgaacctgaa
cctgacgtcaagccatcacggataaaaggtccaatcggacattacacagaccaaggggcg
gagccactggtgcactgtgtacggcttctcgctgcttccttcctattgacgggacagaaa
aatggtctgacccctgacaaggaggtgcgagtgagcgtgaaggctctggcggtcagctgc
atcggggctgcagcagcgctccaccctgaagccttctttaattccctctacctggagccg
ctggacggcactccagtagtagaacagcagtatatcagtgacatgctgggcctggctgac
cacggggacccccagatcagaggggccatagccatcctctgcggagccatcatacaagcc
gcactcaccaaaacacgctacaacatacacagctggctggccagtgtgcagagtgcaaca
ggtaaccctctgtccctggtggacttgttgcctttgctccagagaactctgaaagatgaa
tcctccgtcacctgcaagatggcgtgctctgcagtgaggcactgcctcatgaccgtgtgt
agcagtaccctcagtgagctgggcctgcagttgatgatagaccttcttgctctgagggac
tcgtcctattggctcgttcgcactgagctcttggagactctggcagagatggacttccgg
ttagtgaatttcttggagagaagaacagaacatttgcacaaaggggatcatcactacact
gggcggctgtgcctgcaggaccgagtcctgaacgatttggtcatccgtctgttgggagat
gacgaccccagagtccgacacgtggcagcgtcagctgtcagcaggctggtttccagattg
ttctacgactgcgaccagggtcaagtggacccagtagtggcgattgcccgggaccagagt
tcagtctacctgcagctgctgatgcacgaggcccaacccccctcccagttcacagttagt
accatcacaaggacgtacagaggctacaacttgtccaacaacgtgtctgatgtcacaatc
gagaacaatttgtccagagtcgtcaccgccatctcccacgctttcacctcctctacctcc
aaagccctgacttttggctgctgtgaggccttatgcctcctggctacacatttcccagtg
tgcacctggagtacaggctggcactgcggctatgtgagctccagcagcagcttctcttcc
cgctctagtctgaaccgcagcaggggccgggccctcagtgtgtcgcagaccggcagtgct
ccagcctcttcagcctcctcctcgtctgcacccgacactgagcgcaggactctgacagta
ggcatggccaacatggtgctctccttactctcctccgcctggtttccacttgatctggcc
tcacaccaagatgcacttttgctgtctggcaatctgcttgctgctgtggctcctaaatgc
atgcgtaacccctgggctggagaggaggaaggcggcagtggtagcaccaacaccagtgga
ggccccaacaagatggaggagccctgggcagggctgtcggagcgctccctggtggccatg
gtggagcagctcttctcccacatactgaagatcctcaacatctgcgcccacgtgctggac
gacaccccccccggaccagctattaaagccaccctcccctccttgagcaacaccccctcc
ctcagtcccatcaggaggaaaggcaaggagaaggatattgtggagcccagtgctgccccc
atgagcccaaagaaaagtgttgacatcaacacaggcaggccagcagacggcacggggtcc
accgccgtaaacaagtctaccaccgtcggcaacttctaccacctgcccacctacctcaag
ctctacgacgtcctcaaagctacacacgccaactacaaggtgacgctggacctccacagt
agtcaggagaagtttggaggatttctgcgttcagctctagatgttctctctcagctcctg
gagctcaccacactacatgacatcagcaagtgtgtggaggaaatcttgagctacctcaag
tcctgcttctccagagaacccaccatggcgacagtttgtgtacaacagctgttgaagacc
ctgtttggcaccaacctggcctctcagtgcgagagcgtcctgagcggacccagccgctcc
cagggcaaggctctgcgcctcggctcctccagcctgcgacccggcctctaccactactgc
ttcatggcgccgtacacgcacttcacccaggctttagccgacgccagcctacgcaacatg
gtgcaggccgaacaggagcaggacacctctggatggtttgatgtgatgcaaaaagcttcg
aaccagctgaggtccaacattgcaaacgcgacacgccaaagaggagacaagaatgccatc
cacaaccacatccgtctgtttgagccgctggtcatcaaagctctgaagcagtacaccacg
agcacctcggtggcgctgcagagacaagtcctggacctgctcgcacagctggtgcagctc
agagtcaactactgcctgctggactctgatcaggtgttcatagggtttgtcctgaagcag
tttgagtacattgaagtgggacagttcagagattcggaggccatcatccccaacatcttt
ttcttcctggtgctcctttcatacgagcgctaccactccaagcagataatcagcatcccc
aagatcatccagctgtgtgacggcatcatggcgagcggcaggaaagctgtcacacatgcc
atcccagccctgcagcctatagtccacgacctgtttgtgctgaggggctccaacaaagca
gacgcaggcaaagagttggaaacacagaaagaggtggtggtctccatgctgctcagactg
gtgcaacaccatcaggtgttggagatgttcatcctcgtgctgcaacagtgtcacaaagag
aatgaagacaagtggaagcgattgtcaaggcagattgctgacgtcattcttcccatgatt
tcgaagcagcagatgcacctggactctccggaggcgttgggggtgttgaacactctcttt
gagacggtggccccctcctctctccgacctgtggacatgctgctcaagagtatgttcacc
accccggttaccatggcttccgtagggacggtgcagctgtgggtgtcggggatcctggcg
gtgctccgggtgctcgtctcccagtctactgaggacatcgtcctgtcccgggtccacgag
ctctccctcacccctcatctcctctcctgccacacgatccgccgcctgcatcagcagagc
ccctccccaagcgacccccccgctgccgacacactctgcagccaggacggtgaggcacaa
aaagccctgcctgaggaaaccttcgccaggttcctgctgcagctggtaggagtgttgctg
gatgacatttcctccagacaggttaaagtggacattacagagcagcagcacaccttctac
tgccagcagctgggcaccctgctcatgtgtctcatacatgtcttcaaaagtggtatgttc
cgcaggatcaccactgcagctacccgcctcctaaagggtgagggtgggggtgtgcagcct
ggagcagaggctggcctgttttaccctttagaggctctgaacagcatggtgcagtgcatg
atcaccacccacccctccctggtgctgctttggtgccaggtcctcctcatcatcgactac
acaaactactcgtggtgggcagaggtgcaccagacacccaggagacaaagcctctcgtgc
acaaagctgctgagccctcactcctcaggggaaggagaagaggagaagcatgagacccgg
ttagccatggtcaaccgagagatcgtccgaagaggagcactcatcctcttctgtgactac
gtgtgtcagaacctccatgactctgagcatctgacatggctgatcgtcaaccatgtgcag
gacctcatcagcctttcccatgagcctccagtgcaggatttcatcagcgctgtgcaccgt
aactcagctgccagcggcctcttcatccaggccatccagtcccgctgtgacaacctcagt
gctcctaccatgttgaagaagactctgcagtgtttggaaggcatccacctgagtcagtcc
ggctccctgctggtgctgtacgtggacaagctgctcaacacgcccttcagggttctggct
cgcatggtggacacactggcgtgtcgcagggtggagatgctgctggctgagacactacag
aacagtaaagctcaggtgcctgtggaggagctcaacaggatccaggaatacctccagacc
agcggcctagctcagaggcatcagaggttctactccctgctggacaggttcagagccact
gtcaccgacacctgcagccccacgcctcctgtgacatcacaccccctcgacggagacccg
cctcctgccccagagctggttaatgcagataaggagtggtacgtggctctagtgaagtct
cagtgttgtctccgtggagatgtttccctgttggagacgacagaactcctcaccaaactg
cctcccgctgacctcttaaacatcatgagctgcaaggagttcaacctaagcctgctgtgt
ccatgcctgagtatggggatgcagcggtgtgcccggggtcaggggtccctcttgttagag
acagccttgcaggtaaccctagagcggctcgagggggtcaccgggtcacttcctgtcccg
caccagtccttcctgccgcccgcccagccacagccctactggaaacaactagctgatgtg
tatgatgagccaggtttctaccccagggttctgtcgctgtgcagagcgctgtcccagtac
ctgctgagtgtgagccagctgccctcctcactacacatcccccctgacaaggaacatctc
atcacctctttcacctgcactgctgcagaggtggtggcgtggcgtctgctccagaaccag
ctgcccctcagtgtggacctgcagtgggctctgtcctgcctgtgcctggccctgcagcag
ccctgcgtctggaacaaactctcaactgcggagtacgccacacacacctgctccctcatc
tactctctacgcctcatcatcgttgcagttgctgtgagtcctggtgaccagcttctgcat
ccggagaagaagaagacgagggcggagagagacaccgaaggagacgaggtggacacggca
catgctgaccacatttgcgagtcgcaagcatgcgagatcatggcggagctggtggaaggc
ctgcagagcatccttgccctgggtcaccatagaaacagtgcatttcccgctttcctcaca
ccaaccctgcgcaacattgtcatcagtctgtcccggctgcctctggtcaacagctacacc
cgagtacctccactggtttggaaactgggctggtcccctcagccaggaggagagtatggc
accacactgcctgagatccctgtggacttcctgcaggaaaaggatgtcttcagagagttc
ctctaccgcatcaacacactgggctggagcagcaggactcagtttgaggagacctgggcc
acactgctgggggtgctggtcacccaacccatcactatggaccaggaggaggagacgcag
caggaggaggacttggagcgaacccagttgaatgtgttagcagtgcaggccatcaccagc
ctggtgctgagtgccatgaccctgcccactgctggcaaccctgcagtcagctgtctggaa
cagcagccccgcaacaagaccctcaaagccctggaaacacggtttggaaggaaactggca
gtgataagaggcgaggtggagagagagattcagtctcttgtgtcgaagagagacaacgtc
cacacacaccacccgtaccacgcctgggaccctgtgccctcgctgtcggcagcctctgct
gcaggcacactgatcagccatgagaagctgctgcttcagatcaacacagagagggagatg
ggaaatatggactacaaactaggacaggtctctatccactcagtgtggctaggtaacaac
atcaccccactgagagaggaagaatggggggaggatgaagaagatgaagcagacactcca
gcccccacctccccacccacatctcctatcaactccaggaagcaccgcgcaggagtggac
attcattcatgttcccagttcctcctggagctctacagtcagtggctgatccccggctcc
ccgagcaacaggaggaccccgaccatcctcatcagtgaggtggtccgatcgctgctggcg
gtgtcggacctgttcacagagaggaaccagttcgacatgatgttctccaccctgatggaa
ctgcagaagctccaccccccagaggacgagatcctcaaccaatacctggtgcctgccatc
tgcaaggctgccgccgtcctgggaatggacaaagcaatagcggagcctgtgtgccgcctg
ttggagaccaccctgcgcagcacccaccttcccagccgcatgggggctctgcacggggtg
ctgtacgtgttggagtgtgacctgctggacgacacggccaaacagctcattcccaccatc
tccgagtacctgctgtccaacctgcgggccatcgctcactgtgtgaacctgcacaaccag
cagcatgtgttggtgatgtgcgccgtggccttctacatgatggagaactaccctctggac
gtaggggctgagtttatggctggcattatacaggtgtgtggtgtgatggtgtcggccagc
gaggactccaccccctccgtcatctaccactgtgtgctgcggggcctggagcgcctgctg
ctgtcggagcagctgtcccgcgtggacggagaaacgctggtcaaactcagcgtggatcga
gtcaacatgccgtcgccacacagagccatggctgccctgggcctcatgctcacctgcatg
tacaccgcggtgcttgcgtcgggttcagacgtgacaggggttagaggtcaggttgactgt
gcctcagcagaggcgatgggcgtcacggcgggtcatgttggtttctcctcaggcaaggag
aaagccagccctgccagtcgccccgcccactctgaccctcaggccccggacagcgagtcc
atcattgttgccatggagagggtctctgtgctctttgacaggatccggaaaggtttaccc
agcgaggctcgggtcgtggccaggattcttccccagtttctggacgatttcttcccccca
caggacgtcatgaacaaggtcatcggagagttcctgtccaatcagcaaccttacccacaa
ttcatggccactgtcgtctacaaggtgttccagaccctccacgccacaggacagtcctct
atggtgagagactgggtgctgctgtccctgtctaacttcacccagaggacgccggtggcc
atggcgatgtggagcctctcctgtttctttgtctccgcctccacctcccagtggatctct
gccctactgccacatgtgatcagccgtatgggctccagcgaggtggtggacgtcaacctg
ttctgcctggtggccatggacttctaccggcaccagatcgacgaggagctcgaccgcagg
gccttccagtccgtgttcgagaccgtggcctcgccggggagcccctaccatcagctgctg
ggctgcctgcagtccatccaccaggacacgtccctctga
DBGET
integrated database retrieval system
