Gymnodraco acuticeps: 117537760
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Entry
117537760 CDS
T09661
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117537760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gacu03041
]
117537760
03009 Ribosome biogenesis [BR:
gacu03009
]
117537760
Enzymes [BR:
gacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117537760
Spliceosome [BR:
gacu03041
]
Complex A
U2 snRNP components
U2 related factors
117537760
Complex B
117537760
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117537760
Ribosome biogenesis [BR:
gacu03009
]
Eukaryotic type
90S particles
Helicases
117537760
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_25
SRP54
Flavi_DEAD
nSTAND3
DUF5549
AAA_29
Atrophin-1
AAA_7
Motif
Other DBs
NCBI-GeneID:
117537760
NCBI-ProteinID:
XP_034058990
EnsemblRapid:
ENSGAUG00000013725
UniProt:
A0A6P8TM29
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MSKRHRLDLGDDYSSTKKRSEGRDRDRDRDRDRDREDRSRDRDRDRDRDRDRDRDSKPST
GPSNITVPMPCLAPIKQMAMQQQINPFTNLPHTPRFYEILKKRLQLPVWEYKENFSDIIT
RHQSFVLVGETGSGKTTQIPQWCVDMVKGQPGPKRAVACTQPRRVAAMSVAQRVADEMDI
MLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDI
LMGVLKEVVRQRGDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDY
LEAAIRTVIQIHMCEEEEGDALLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYST
LPPQQQQRIFEAPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRI
RVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV
LQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQL
AKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVY
HAFKQNHEANQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYTNIRR
ALCTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCS
DIKPEWLVKIAPQYYEMGNFPQCEAKRQLERIIAKLDSKEYSQY
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagacatcgccttgatttgggggatgactactcttccaccaagaagaggtct
gaagggagagacagggatcgtgacagagaccgtgacagagaccgtgaggaccgctccagg
gacagggaccgagatagggaccgggatagagaccgggacagagactcaaagccttctact
ggcccgtctaacatcacagtgcccatgccctgcttggcacccatcaagcagatggctatg
caacagcagatcaacccattcaccaacctgccgcacactccacgcttctacgagatccta
aagaagcggttacaacttccagtgtgggagtacaaagaaaacttcagcgatatcatcaca
cgtcatcagagctttgtccttgttggagaaactggctctggaaagaccacacagatccca
cagtggtgtgtggacatggtgaagggccagcctggacctaagagggctgtagcctgtact
cagcccaggagagtggctgctatgagtgtggctcaaagagtggcagatgaaatggacatc
atgcttggacaggaagttggctactctattcgatttgaggactgcagctctgctaagact
attctcaagtacatgacagatggtatgttactgcgagaggccatgaatgacccgctgctg
gagcgttacggtgtgatcattctggacgaggcccacgagcgaaccctggccacagatatc
ctgatgggagtactcaaggaggtggtgcgtcaacgaggagatctgaaggtgattgtcatg
agtgccacgcttgatgccgggaagtttcaggtgtatttcgacaactgtcctctcctcact
attcccgggcgtacacatcctgtagagattttctacactccagaaccagagcgagactac
ctcgaggcagcgatccgcactgtcatccagattcatatgtgtgaggaagaagagggagac
gccctgctctttctcactggtcaagaggaaatcgatgaggcgtgcaaacggatcaagcgt
gaggtagatgaccttggacctgaagttggagacatcaaaatcattccactgtattccaca
ttaccaccgcagcagcagcaacggatctttgaggctcctcctccaagaaagcccaatggt
gcaataggaagaaaggttgtggtttctacaaacattgctgagacctctctgacaatagac
ggtgtggtgtttgtcattgatcctggatttgcaaagcaaaaggtttacaatccccgtatc
agagtagagtctttgcttgtcacggccatcagtaaagcttcggcccagcagagggcgggt
cgagccggcagaacccgtccagggaaatgtttccgcctctacacagagaaggcctacaaa
actgagatgcaggataacacgtaccctgagattcttcgatccaacttgggatctgttgtg
ctgcagctgaaaaagctgggcatcgatgaccttgtgcactttgacttcatggacccccca
gctccagagacgctgatgagggccctcgagctgctgaattacctggcagctctcaatgat
gacggcgacctgacggagctgggctccatgatggccgagttccctttggacccccagctg
gctaagatggtcattgccagctgcgagtttaactgctctaacgagatcctttccattact
gccatgctgtcagtcccacagtgttttgtccggcccacggaggctaagaaggcggcagac
gagtccaagatgaggtttgctcacatcgacggagatcacttgacgctgctcaacgtctac
cacgccttcaaacaaaaccacgaggccaaccagtggtgctatgataactttgtcaactac
cgctcactgatgtcagctgacaacgtgcgccagcagctgtccaggatcatggaccgcttc
aacctgccgcgccggagcacagagttcaccagcagagattattacaccaacatccgcagg
gcgctctgcaccggcttcttcatgcaggtggctcatttggagcgcacaggtcattacctc
actgtcaaagacaaccaagtggtccaactccatccctccacagtcctggaccacaagccc
gagtgggtgctctataatgaatttgtcctgactaccaaaaactacattcgcacttgctca
gacatcaaaccagagtggttggtgaagattgcccctcagtactatgaaatgggtaacttc
ccccaatgtgaagctaaaaggcagctggagcgaatcattgccaaactagatagcaaggag
tattcccagtactga
DBGET
integrated database retrieval system
