Gymnodraco acuticeps: 117537933
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Entry
117537933 CDS
T09661
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117537933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117537933
03036 Chromosome and associated proteins [BR:
gacu03036
]
117537933
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117537933
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
117537933
Chromatin remodeling factors
BAF complex
117537933
PBAF complex
117537933
GBAF(ncBAF) complex
117537933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
BRK
Bromodomain
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
117537933
NCBI-ProteinID:
XP_034059238
UniProt:
A0A6P8T6C4
LinkDB
All DBs
Position
Unknown
AA seq
1666 aa
AA seq
DB search
MSTPDPPMGSTPRPGPSPGPGPSPGAMLGPSPGPSPGSSHSMMGPSPGPPSGHPQLVPSG
YGQESMHPLHKPMESMHEKSLSEESRFSQMKGLSLRQGGHSGMGPPPSPLDQHSQGYHSP
LGGSDHSSPVPSNGPPSGPLMPSSSSSSGCPSSASTPLDGPGVDQHTLGPTNRPGPPGPS
PGPSMGLGVSTLVSGLESGGPPGPGGPGGPTPFNQNQLNQLRAQIMAYKMLARGQPLPDH
LQMAVQGKRPMPGMQQPMQSLVPGGGGGLMGGPAGPILGPGMMGSGYGRVHGMMGPNMPP
PVPSATPVGMQMQNPNGPPKSWPEGPLVNAAAPSNAPQKLIPPLSTGRPSVPPAASRVMP
PQTQSPGQPAQPTPMMPFHTKQNRITPIQKPCGLDPVEILQEREFRLQARITHRIAELEN
LPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMHRDTALETALDAKAYKRSKHQSL
REARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITGKMQKLTKAVATY
HANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTDL
VRAHKAAQALKEKKKKKKKKKKKKKLESAEGQTPAMGPDGEPLDETSQMSDLPVKVIHVD
SGKILTGVDAPRAGQLETWLEMNPGYEVAPRSDSEEEEEEEEEEEEPQPSTNQVEEKKKI
TDPDCKDVSEVDVRHVIENAKQDVDDEYSGAAFARSLQSYYAVAHAVTEKVDKQSTFLIN
GQLKQYQVKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGAYLIIVP
LSTLSNWVYEFDKWAPTVVKVSYKGSPAARKAFVPQLRSGKFNVLLTTYEYIIKDKQVLA
KIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPT
IFKSCITFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEK
VEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYM
FHQIEESFSEHLGLSGGIVQGLDLYRASGKFEVLDRILPKLNATNHRVLLFCQMTTLMTI
MEDYFAYRGFKYLRLDGTTKADDRGMLLKTFNEPGSDYFIFLLSTRAGGLGLNLQSADTV
IIFDSDWNPHQDLQAQDRAHRIGQLNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA
GMFDQKSSSHERKAFLQAILEHEEQDEVGDQEVCLRINEEDEVPDDETVNQMIARSEDEF
DQFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEEEEEKLFGRGSRE
RKEVDYSDSLTEKQWLKSVFPMQAIEEGKLDELEEEVRHKKTTRKRKRDRDLDLPGPSSS
LGGRGRGDKDDDGKRQRKRGRPPADKLSPNPPSLSKKMRKIVDAVIKYKDSASGRQLSEV
FIQLPSRKELPEYYELIRKPVDFRKIKEKIRGHHYRSMGDLERDVMLLFQNAQTFNLEGS
LQIYEDSIVLQSVFTSLRQKIEEESEGEESEEEEDDLEEGSESESHTVKMKIRLGKKDKS
GDRGKGRSRRTGRNRAKPVVSDDDSEDEQEEERSPSATDEESGIVM
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccagatccccccatgggaagcacacctcgcccaggtccttcccctggccca
ggtccctcccccggggctatgctaggccccagcccagggccctctccaggctcctctcac
agtatgatgggccccagccccggccctccctctgggcacccccagctagtgccctctgga
tacggccaggagagcatgcaccctctgcacaaacccatggagagcatgcatgagaagagc
ctgagtgaggaaagtcgcttcagtcagatgaagggactgtctctgagacagggcgggcac
agtggcatgggccctccacccagtcctctggaccaacactcacaaggttaccactctccg
ttggggggctctgaccactccagccccgtcccttcaaacggccccccctctggacctctc
atgccatcctcctcttcctcctctggttgtcccagctctgcctctacacctttagacggt
cccggtgtagatcagcacactctgggtcccactaaccggcctggcccccccggccccagt
ccaggacccagcatgggcctcggtgtctctacccttgtatctggccttgagtctggaggc
cctcctggtcctggaggtcctggtggcccgactcccttcaaccagaaccagctcaaccag
ctcagagcccagatcatggcttataagatgctggcccggggtcagcccctgccagatcac
ctccagatggctgtccaagggaagaggccaatgcctgggatgcagcagccaatgcaaagc
ctggttcctggagggggaggcgggctgatggggggaccagcagggcccatactagggccg
gggatgatgggttccggctatggccgagttcatggaatgatgggtcccaacatgcctcct
ccagtcccatcagctactccagttgggatgcagatgcaaaacccaaacggacctcccaaa
tcctggccagaaggccccctggtgaatgcagcagccccctctaacgcaccccagaagcta
attccccctctttccactggccggccctcagttcctccagctgcctctcgagtaatgcct
ccacagacccagtcccccggccagccggcacagcccactcccatgatgcctttccacacc
aagcagaaccgcatcacccccatccaaaaaccctgcggcctcgacccagtggagattcta
caggagagggagttcaggttacaggctcggatcactcatcgtattgctgagctggagaac
ctgccaggctctctggctggtgacctgcgtacaaaagctactattgagctcaaagccctc
cgactgcttaacttccagagacagttgcgtcaagaggtggtggtgtgcatgcaccgggac
acagctctagagacggccctcgatgccaaggcctacaagcgaagcaagcatcagtctctg
cgagaggcgcgcatcacagagaaactggagaagcagcagaagattgagcaagagcgcaaa
cgaaggcagaaacatcaggagtacctgaacagcatcctgcagcatgccaaagacttcaaa
gagtaccaccgctccatcacaggcaaaatgcagaagctgacaaaagcagtggccacctac
cacgccaacactgagcgggagcagaagaaagagaacgagcgtattgagaaagagaggatg
aggaggctcatggccgaggatgaggagggctatcgtaaactgatcgaccagaagaaggat
aagcgcctggcctacctgctgcagcagactgacgagtacgtggccaacctcaccgatctg
gtccgagctcacaaagctgcgcaggccctcaaggagaaaaagaagaagaagaagaagaag
aagaaaaagaagaagttggagagtgctgagggtcagactcctgccatgggtcctgatgga
gagcctctggatgagacgagtcagatgagtgaccttccggtgaaggtcatccacgtggac
agcgggaagatcctgacaggggtggacgctcctagagccggacagctggagacctggctg
gagatgaaccctggttatgaggtggctcctcgctcagacagcgaggaggaggaagaggag
gaggaggaagaggaggagcctcagccgtcaactaaccaggtggaggagaagaagaagatt
acagatcccgactgcaaggacgtgtcagaggtggacgtccgacacgtcatcgaaaatgct
aaacaggacgtggatgatgaatatagcggagcagcgttcgcccgaagcctccagtcgtat
tacgctgttgctcacgctgtcacggagaaggtggacaaacagtccacttttttaataaat
ggacaactcaaacagtatcaggttaaaggattggagtggctggtttccctctacaacaat
aacctgaacgggatcctggctgatgagatgggcctggggaaaaccatccagactatcgcc
ctcatcacgtacctcatggagcacaagcggctcaacggcgcctacctcatcatcgtacca
ctctcaactctttctaactgggtgtatgagtttgacaaatgggcaccgacagtcgtgaaa
gtgtcctacaaggggtctcctgctgcaagaaaagcctttgtgcctcaactgcgcagtgga
aagtttaacgttttactcaccacttacgagtacatcatcaaggataaacaagtgctggcc
aagattcgttggaagtacatgattgtggacgagggccaccggatgaagaaccaccactgt
aagctgacccaggttctgaacacacactacctggccccgcgccgtgtactgctcacagga
acgccgctgcagaacaaactacccgagctctgggcgctgctcaacttcctgctgcccacc
atattcaagagctgcatcaccttcgagcagtggttcaacgcccctttcgctatgacagga
gagaaggttgatcttaatgaagaggagaccatcttgattatccgtcgtctccataaagtc
cttcgccccttcctcttgcgcagattaaagaaggaggtggaggcccagcttccagagaag
gtggagtacgtgataaagtgtgacatgtcgtctcttcagagagtgctttacaggcacatg
caagccaagggggtcctgctcactgacggatcagaaaaggacaagaagggtaaaggaggc
acaaagacactgatgaacaccatcatgcagctgaggaagatctgtaaccacccttacatg
tttcatcaaatagaggaatctttctctgaacatttaggattatctggtgggatagtccag
ggtcttgacctgtatcgggcatcaggaaagtttgaggtgttggatcgaatcctgccaaag
ctcaacgccacaaaccacagagtgctgctcttctgtcagatgaccactctcatgaccatc
atggaggactactttgcttatcgcggcttcaagtatctgcgcctggatggtaccacaaag
gctgatgatagaggaatgttactgaagacttttaatgaaccagggtcagactactttatc
ttcctcctgagcacaagagccggaggcctcggcctcaacctgcagtctgcggacactgtg
attatttttgactctgactggaacccacatcaggacctgcaggctcaggacagagctcac
cgtattggtcagctaaacgaggtgcgagtgctgcgtttgtgcacggtaaacagcgtcgaa
gagaaaatcctggctgctgccaaatacaaactgaacgtggaccaaaaggtcattcaggct
ggcatgtttgaccagaagtcttcgagccatgagcgcaaggccttcctgcaggccatcctg
gaacacgaggagcaagacgaggtcggggatcaggaagtgtgtctacgaattaatgaggag
gatgaggtgccagacgacgagacggtcaaccagatgatcgccaggagtgaggacgagttc
gaccagttcatgcgtatggaccttgaccgccgtcgtgaggaagcccgtaacccgcggaga
aaacctcgtctgatggaggaggacgagctgcccacttggatcatgaaggatgacgctgag
gttgaacgtctgacctgtgaggaggaagaggagaaattgtttggaagagggtctcgagag
cggaaggaggtggactacagcgactcactgacggagaagcaatggctcaagtctgtgttt
cccatgcaggcaatagaggaaggcaaactagatgagttggaggaggaggtacggcacaag
aagaccacccgcaagaggaagagagaccgcgacctggacctccccggtccctcctcttcc
ctggggggacgagggcgaggggacaaggatgatgacgggaagaggcaaaggaagaggggg
cgaccacctgctgataaactctcccccaaccccccctccctctcaaagaagatgaggaag
atcgtagatgctgtcatcaagtataaagacagcgccagtggtcgtcagctgagcgaagtg
ttcatccagctgccgtctcgaaaggagcttccagagtactacgaactaatccgcaagcct
gtggacttcagaaagatcaaggagaagattcgaggacatcactaccgcagtatgggtgac
ctggagcgagacgtcatgctgctctttcaaaacgctcagaccttcaacctggagggatcc
ctgcagatctatgaagactccatcgtcctccagtcagtgtttaccagtctgaggcagaag
atcgaggaggaaagtgagggagaggagagtgaggaagaggaagatgatctggaagaaggt
tcagagtccgaatcacacacagtgaaaatgaagatccgtttgggaaagaaggataaatct
ggagatcgggggaagggtcgcagcagacgaacaggacgcaacagagccaaaccggttgtt
agtgatgacgactctgaggatgagcaggaagaggagcgttcccccagtgccaccgacgag
gagtccggaattgtaatgtag
DBGET
integrated database retrieval system
