Gymnodraco acuticeps: 117537984
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Entry
117537984 CDS
T09661
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117537984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gacu03041
]
117537984
03009 Ribosome biogenesis [BR:
gacu03009
]
117537984
Enzymes [BR:
gacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117537984
Spliceosome [BR:
gacu03041
]
Complex A
U1 snRNP components
U1 related factors
117537984
Complex B
117537984
Ribosome biogenesis [BR:
gacu03009
]
Eukaryotic type
Pre-60S particles
Helicases
117537984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
117537984
NCBI-ProteinID:
XP_034059348
UniProt:
A0A6P8T6N2
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGSGGGSRGGLPPGKFGNPGERLRKKHWNLDELPKFQ
KNFYQEHSDSTRRPVQEIEQYRRNKEVTVKGRDCPKPIIKFHEAEFPNYVMEVIVNHNWT
DPTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLAP
TRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECG
KTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLK
DYVQINVGALQLSANHNILQIVDVCNDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRCD
ELTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVIN
YDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLIAVLREANQAINPKLIQMA
EDRGGRGRGGRGGYKDDRRDRYSGGGRSNFGGTSYRDGDRGFGGGPKSAFGGNKAQNGGS
YGGSGNSSGNYGNNNYSNSNGQGNFPTNQVGAFGNQSFQGPPQFGGMQRATQNGMNHPPF
PFNSQPPPQAQQPPPPPMVPYPMPPTFPQ
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcctggattttcagacagagaccgtggacgagatagagggtatggtggaggaccccct
cgttttggtggtggtagcggtggaggcagtaggggcggacttcctccgggaaaatttggc
aaccctggtgagaggctgcggaagaagcactggaaccttgacgagcttccaaagtttcag
aagaacttttaccaggaacattcagattcaactcgcagaccagttcaagagattgaacag
taccgaagaaacaaagaagttacggtcaaaggcagggattgccccaagccaattataaaa
ttccatgaagctgaatttccaaactacgtcatggaagtcattgtcaatcataactggact
gatccaactccaattcagtctcaggggtggccagttgcgctgagtggtaaagacatggtt
ggcatcgctcaaacagggtctgggaaaacccttgcttatctcctacctgcaattgtacac
attcaacatcaaccattcttggagcatggagatggacctatatgcttggtgctggcgccg
acccgcgagctggctcagcaggtgcaacaggtggctgctgaatacggcagggcctcccgt
ctcaagagcacctgcatctacggtggtgcgcccaagggaccacaaatcagggaccttgag
aggggtgtagagatttgcattgctaccccaggtcgtctcattgactttctggagtgtggt
aagactaatttgcgtcgttgtacctatctggtgctggatgaagcagaccgcatgctggac
atgggatttgaacctcagatccgcaagatagtggaacaaattcggccagatcgtcagacc
ctgatgtggagcgccacctggcctaaggaagttcgccagctggctgaggacttcctgaag
gactatgttcagatcaacgttggggcactgcagctcagtgccaaccacaacatcctgcag
atagttgatgtttgcaatgacatggagaaggaggacaaactgatccgtttgctggaggag
ataatgagtgaaaaggagaacaagactattatatttgtggagaccaaaaggcgttgtgat
gagctcaccaggaggatgagaagagatgggtggccagcaatgggaattcatggagacaag
agccagcaggagagggactgggtccttaatgagttcagatatggcaaagctccaatcctc
atcgccaccgatgtggcctcccgtggcttggatgtggaggatgtgaaatttgtcatcaat
tatgactatcctaactcctccgaggattatatccaccgcattggacgcacagcccggagt
caaaaaacgggcacagcctacacctttttcacccctaacaacatgaaacaagccagtgac
ctgatagctgtgctgcgcgaggccaaccaggccattaaccccaagctgatccaaatggca
gaggacagaggaggtcgtggaaggggtggaagaggtggctacaaggatgaccgtcgggat
aggtattctgggggtgggaggagtaacttcggaggtactagctacagggacggggataga
gggtttggcggtgggccgaagagtgcctttggtggtaataaggcccaaaatggtggcagc
tatggaggcagtggtaactctagtggtaactatggaaacaacaactacagcaacagtaat
ggacagggtaatttccccacaaaccaggtgggtgcgtttggtaaccaaagcttccagggc
ccccctcagtttgggggcatgcagagggctactcagaatggcatgaaccacccaccattc
ccattcaactctcagccaccaccacaggcccaacagcctccaccaccaccaatggtgccc
tatcccatgccaccaaccttcccacagtag
DBGET
integrated database retrieval system
