Gymnodraco acuticeps: 117538005
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Entry
117538005 CDS
T09661
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04120
Ubiquitin mediated proteolysis
gacu04137
Mitophagy - animal
gacu04144
Endocytosis
gacu04340
Hedgehog signaling pathway
gacu04350
TGF-beta signaling pathway
gacu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117538005
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117538005
04350 TGF-beta signaling pathway
117538005
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117538005
04137 Mitophagy - animal
117538005
09144 Cellular community - eukaryotes
04520 Adherens junction
117538005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gacu04131
]
117538005
04121 Ubiquitin system [BR:
gacu04121
]
117538005
03029 Mitochondrial biogenesis [BR:
gacu03029
]
117538005
Enzymes [BR:
gacu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117538005
Membrane trafficking [BR:
gacu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117538005
Autophagy
Mitophagy
Other mitophagy associated proteins
117538005
Ubiquitin system [BR:
gacu04121
]
Ubiquitin ligases (E3)
HECT type E3
117538005
Mitochondrial biogenesis [BR:
gacu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117538005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117538005
NCBI-ProteinID:
XP_034059370
UniProt:
A0A6P8TN09
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MEAGTQRGMSSQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDT
VRNTLDPKWNQHYDLYIGKADSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGY
QRLDLNKLGPNDNDTVRGQIVVFLVLVNCAVSLQSRDRIGTGGPVVDCSRLFDNDLPDGW
EERRTASGRIQYLNHITRTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAEAS
VPQGVQRVQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWH
DPRVPRDLSNVNCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNP
SPNGSRVAMESQNTNLSQTPPLKEQVVPGVPLQPLSPAQLPEEAECLTVPKYKRDLVQKL
KILRQELSAQQPQAGHCRIEVCREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGG
VAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFH
GHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDINGVLDHTFCVEHNAY
GEIIQHELKPNGKSVNVTEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKS
FDEKELELIVCGLGKIDIADWKSNTRLKHCTTDTNIVKWFWKAVETFDEERRARLLQFVT
GSSRVPLQGFKALQGAAGPRLFTIHQIDANANNLPKAHTCFNRIDIPPYESYDKLYDKLL
TAIEETCGFAVE
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaggctggaacacaaaggggaatgtctagccaaggagttaggagaaatggcccagtg
aagctgcggttgacagtcctgtgtgcaaagaacctggcaaagaaagacttcttccggttg
ccagatccatttgctaaagtggtggtggacggctctggacaatgtcactcaacagatact
gtgagaaatacgctggacccaaagtggaatcaacattatgatctatacattggaaaggca
gactcaatcaccatcagcgtatggaatcacaagaagatccacaaaaagcagggtgcaggt
ttcctcggctgtgtccgcctcctgtccaacgccatcaacagactcaaagacactggctat
cagagactggacctgaataagctgggccccaatgacaatgatactgtgagaggtcaaata
gttgtcttccttgtcttggttaactgtgcagtaagtcttcagtccagagatcgcatcggg
acaggagggccggtagtggactgcagccgcttgttcgacaacgacctgcctgatggttgg
gaagaaaggaggacggcgtctgggaggatacagtacctgaaccacatcacacgtaccacg
cagtgggagagaccgaccaggccagcgtcggagtactccagcccctcagggcgtcctctg
agctgtgtggtggacgagaacacgccggtgatgacgcccgttaacggggccgaggcgagc
gtgccgcagggcgtacagcgggtccaggagagacgggttcgatctcagcggcatcgcaac
tacatgagtcgaacacacctgcatacaccccctgacctgcctgagggttatgagcaaaga
acaactcagcagggtcaagtctacttcctccacacgcagactggggtcagcacatggcat
gacccccgggtgcccagggatctcagcaatgtgaactgtgaggagctgggcccgctgcct
ccaggctgggagataagaaacacagccacgggtcgcgtctactttgtcgaccacaacaac
cggacaactcagttcacagacccacgactctctgctaacctgcatctagtactcaaccca
agtccaaatggttcccgtgtggccatggaaagccaaaacactaacctcagtcaaacgcct
ccgttgaaggagcaggttgttcccggggtcccgctgcagcccctctcccccgcccagctg
cctgaggaggcggagtgcctgacggtgcccaaatacaagagagacctggtgcagaagctg
aaaatcctgcggcaggagctctcagcgcaacaaccacaggccggccactgccgcatcgag
gtctgccgtgaggagatatttgaggagtcgtaccggcaggtgatgaagatgcgtccgaag
gatctctggaaaagactgatgatcaaattcagaggagaagagggactggactatggcggg
gtagcaagggaatggttatacctgctgtcccacgagatgctgaacccgtactacggcctg
ttccagtactccagagacgacatctacactctgcagatcaacccggactctgctgtcaac
ccggagcacctgtcgtacttccacttcgtgggtcgcatcatgggcatggcggtgttccac
ggccactacatcgacggaggcttcactctgcccttctacaaacagctgctggggaaaccc
atcacgctggacgacatggagtccgtcgaccccgacctccacaacagcctcgtctggatc
ctggacaatgacataaacggcgtcctggaccacactttctgtgtggagcacaatgcctac
ggagaaatcatccaacatgagctcaaacccaacggcaagagtgtgaacgtcacagaggac
accaagaaggagtatgtcaggttgtatgtgaactggcgtttcctgcatggcatcgaggct
cagtttctggctctgcagaaaggcttcaacgaggttatccctcaacacctgctcaaatcc
tttgatgagaaagaactggagctgattgtgtgtggcctgggaaagatcgacatcgctgac
tggaagtccaacacccgtctgaagcactgcaccaccgacaccaacatcgtcaagtggttc
tggaaagccgtggagacgtttgacgaggagaggagggcccggctgctgcagtttgttacc
ggctcctccagagtgcccctgcagggcttcaaggctttacaaggagctgcagggcccaga
ctcttcaccattcatcagatcgatgcaaacgccaacaatctgcccaaagcccatacctgc
ttcaaccggattgacatcccgccctacgagagctacgacaagctatacgacaagctgctg
actgcgatcgaggagacctgtggcttcgcagtggaatga
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