Gymnodraco acuticeps: 117538413
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Entry
117538413 CDS
T09661
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04142
Lysosome
gacu04144
Endocytosis
gacu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117538413 (cltca)
04142 Lysosome
117538413 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117538413 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gacu04131
]
117538413 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gacu04147
]
117538413 (cltca)
Membrane trafficking [BR:
gacu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
117538413 (cltca)
Exosome [BR:
gacu04147
]
Exosomal proteins
Proteins found in most exosomes
117538413 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
117538413
NCBI-ProteinID:
XP_034059974
UniProt:
A0A6P8T866
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQSQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDASKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAG
GEELFARKFNNLFAAGTYSEAAKVAANAPKGILRTPDTIRRFQGVPTQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRPHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV
NFSQDAEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPDLWASV
LLETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKDLVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRAYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
SKVKQLPLVKPYMRSVQSHNNKSVNEALNNLFITEEDYLALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDVELAEELLSWFLQ
EDKKECFAACLFSCYDLLRPDVVMETAWRHNLMDFSMPYFIQVMREYLSKVDKLETSETV
RKEEEQATETQPIVYGTPQLMLTAGPTVPVAPQQPYGYGYQAPAGFAPPAAQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgcctattcgctttcaggagcacctgcagctccaaaatttagggatc
aatccggccaacataggcttcagcaccctgaccatggagtcggataagttcatctgtatc
cgggagaaagtgggcgagcagtctcaggtggtgatcatcgacatggcagaccccaacacc
cccatccgcaggcccatctccgccgacagcgccattatgaatccagccagcaaagtcatt
gcacttaaagacgcctccaaaacccttcagatcttcaacatcgagatgaagagcaagatg
aaggcgcacaccatgacggacgatgttaccttctggaagtggatctcccttaacacagtc
gcacttgtgactgataatgccgtctaccactggagcatggagggcgactcacagcctgtg
aaagtcttcgaccgccactccagcctggcaggctgtcagatcatcaactaccgcacggac
gccaagcagaaatggctcctgctcatcggcatctcagcccagcaaaatcgggttgttgga
gccatgcagctctactccgttgacagaaaggtttcccagcccatcgaaggccatgctgcc
agctttgcccagttcaagatggaggggaacacagaggagtcaactttgttctgcttcgct
gtccgaggccaggctggaggaaagttgcacatcattgaagtggggaccccaccaactggc
aaccagccatttccaaagaaagcagtggatgtgttcttccctccagaagcccagaacgac
ttccctgtggccatgcagataagctccaagcaagatgtggttttcctcattaccaaatat
ggctacattcacttgtatgacttggagacgggcacctgcatctacatgaaccgcatcagc
ggggagaccatctttgtgactgctccacatgaggccaccgcaggaatcatcggggtcaac
aggaagggacaggtgctctcagtgtgtgtggaagaggaaaacatcatcccctacatcact
aacgtactccagaatccagatctggctctccgcttggctgtccgcaacaacctcgctggt
ggagaagagctctttgcgcgcaagttcaacaacctgtttgctgccggtacctactctgag
gctgccaaggttgctgcaaacgcaccaaagggtatcctgcggaccccagacaccatccgt
cgctttcagggcgttcccacccagccggggcagacctcccccctgctgcagtacttcggc
attctgttggaccagggccagctcaacaagtttgagtccctggagctctgcaggccggtc
ctccagcaggggcgcaagcagctcctggagaagtggctgaaggaagacaagttggaatgc
tcggaggagctgggtgacctggtgaaggcagtggatcccacgttggctctcagtgtctac
ctgagggccaacgtccccaacaaagtcatccagtgcttcgcagagactggtcagttcccc
aagatcgtcctgtacgccaagaaggtgggctacactccagactggatctttctgctcagg
aatgtgatgcggatcaacccagaacaaggcctgcagtttgcccagatgctggttcaggat
gaggagccgctggccgacatcacacagattgtggatgtcttcatggagtacaacctgatc
cagcagtgcacctcgttcctcctggacgctctgaagaacaacagaccctcagaaggaccg
ctgcagactcgcctgctggagatgaacctcatgcatgctccacaggttgctgatgctatc
ctgggcaaccagatgttcaccaactacgatcgtccacacatcgcccagctgtgtgagaag
gctggactccttcaaagagcgctggagcactacaccgacctgtacgacatcaagcgtgcc
gtggtgcacacacacctgctcaacccagagtggctggtgaactactttggctccctgtcg
gtggaggactctctggagtgcctcagggccatgctgtccgccaacatccgccagaacctg
cagatctgtgtccaggtggcttccaagtaccacgaacagctcaccacacagtccctcact
gagctctttgaatccttcaagagctttgaaggtctgttctacttcctgggctctattgtt
aacttcagtcaggacgctgaagttcacttcaaatacatccaggccgcctgcaagaccggc
cagatcaaagaggtggagaggatctgcagagagagcaactgctacgacccggagcgcgtc
aagaacttccttaaggaagccaaactcaccgaccagctgccactcatcatcgtctgtgac
cgctttgactttgtccacgacctggtgctctacctgtaccgcaacaacctgcagaagtac
atcgagatctatgttcagaaggtgaatcccagccgtctgcctgttgtggtcggtggtctc
ctggatgttgactgctcagaggatgtcatcaagagtctgatcctcgtcgtcaggggacag
ttctctaccgatgaactggtcgctgaggtggaaaagaggaacagactgaagctgctgctg
ccctggctggagtctcgtatccacgaaggctgcgaggagcccgccacccacaatgccctg
gctaagatctacatcgacagcaacaacaaccctgaacgcttcctgagggaaaaccccttc
tacgacagccgtgtggtgggaaagtactgcgagaagagagacccccacctggcctgtgtg
gcctacgagagaggacaatgtgaccaggagctgatcaatgtctgcaatgagaactccctg
ttcaagagcttgtctcgctacctggtgcgtcgcaaagaccctgacctgtgggccagcgtg
ctgctggagaccaaccccttcagaagaccactcattgaccaggtggtgcagacagcgctg
tcagagacccaggacccagaggaggtgtccgtcacagtcaaggccttcatgaccgcagac
ctgcccaacgagctcatcgagctgctggagaagattgtgctggacaactctgtcttcagt
gaacacagaaatctgcagaacctgctgatcctaaccgcaatcaaagccgaccgtacccga
gtgatggagtacatcagcaggctagacaactatgacgcccccgacatcgctaacatcgcc
atcagcaacgagctcttcgaggaggccttcgccatcttcaagaagtttgatgtgaacacc
tccgctgtgcaggtgctgatcgaacatattggcaacctggaccgggcctatgagtttgcg
gagcgctgcaatgagcctgccgtgtggagccagctggctaaggctcagctccagaaggac
ctggttaaagaggccatcgactcgtacatcaaagccgacgatccttctgcatacatggag
gtggtgcaggctgctgataagagtggaaactgggaggacctggtgaaattcctgcagatg
gctcgtaagaaggcccgcgagtcctacgtggagacggagctcatctttgccttggccaag
accaaccgcctggcagaactggaggagttcatcaacggacccaacaacgcccacatccaa
caggtgggtgaccgctgctacgatgagaaaatgtacgatgccgctaagcttctctacaac
aacgtctccaacttcggtcgtctggcttcgactctggtgcacctcggggagtaccaggcc
gctgtggacggcgcccgcaaggccaacagcacccgcacctggaaggaggtgtgcttcgcc
tgcgtggacggaaaggagttccgactggcccagatgtgcggtctccacatcgtggtgcac
gctgacgagctggaggagctgatcaactactaccaggaccgcgcttactttgaggagctg
atcaccatgctggaggccgccctgggcctggagcgcgcgcacatggggatgttcacggag
ctcgccatcctgtactccaagttcaagccgcagaagatgagggagcacctggagctcttc
tggtccagagtgaacatcccgaaggtcctgagagcagcggagcaggcgcacctgtgggcc
gagctggtcttcctgtacgacaagtacgaggagttcgacaacgccatcatcaccatgatg
aaccaccccacagacgcctggaaggagggccagttcaaagacattatcaccaaggtggcc
aacgtggagctgtactacaaagccacacagttctatctggagttcaagcccttattactg
aatgatttgctcatagtgctttcccccagactggaccactcccgtgctgtcaacttcttc
agcaaggtgaaacagctgcctctggtcaaaccctacatgcggtcagtacagagccacaac
aacaaatcagtcaatgaagcacttaacaacctcttcatcacagaggaggactatctggca
ctgaggacatcaatagacgcctacgacaactttgacaacatctccctggcccagcgcctg
gagaagcacgagctgatcgagttcagacggatcgctgcgtacctcttcaagggcaacaac
cgctggaaacagagtgtggagctgtgcaagaaggacaagctctacaaggacgccatgcag
tacgcgtcggagtcgaaggacgtggagctggccgaggagctgctgtcctggttcctgcag
gaggacaagaaggagtgtttcgccgcctgcctgttctcctgctacgacctgctgcggccc
gacgtggtgatggagaccgcctggaggcacaacctcatggacttctcgatgccgtacttc
attcaggtcatgagggagtacctcagcaaggtagacaaactagaaacctcagagactgta
aggaaagaggaggagcaggcaacagagacgcaacccatcgtctacggcacaccccagctg
atgctgacggcgggccccaccgtccccgtggctccccagcaaccctacggctacggctac
caggcgcccgcaggcttcgctccgccagctgctcagccaggctttggctacggcatgtaa
DBGET
integrated database retrieval system
