Gymnodraco acuticeps: 117538420
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Entry
117538420 CDS
T09661
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117538420 (med13a)
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
117538420 (med13a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
117538420
NCBI-ProteinID:
XP_034059985
UniProt:
A0A6P8T8H5
LinkDB
All DBs
Position
Unknown
AA seq
2153 aa
AA seq
DB search
MSSCYVPNGASLEDCHSNLFCLADLTGIKWKRFVWQGPTSAPILSPVTEEDPILCSFSRC
LKADILSVWRRSQRPGRRELWLFWWGDDPNFADLIHHELAGEDVGLWENGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKSEHLSCAFTFFLHGESNVCTSVEI
NQHQPVYHLTEEHLTLAQQASSPFQVILSPFGLNGTLTGQSFKMSDPPTQKLIEEWNQFY
PISPSAKGGSSSDKAEDMDWEDDSLASVEVLVGGVRMVYPACLVLVPQSDIPVVAPVGSS
HCTAVYPGGHQVPASQREPAMSLVTLTPPTSPEEAQTVDSHSAQKWVKMPSTSDAFSVDK
TSHHGGKIPRRLSTQVVERVWQECNINRAQNKRKFSAATNGTCDEELSEKAAAWDFVEHS
QRSYCSCSRYKSMKQRTGSTPGQTPTSGQPSQTPTKHKAGGEKPEKGDKQQKRPQTPFHH
RSMTMDDASMEAEATAGQRIAMRGQDGGRFNSMRSTDVSGIQKNTQLHCGGVNVGQSEQS
NSPQPPPLSPHPCEESGEGMKNPSTPNSQHFYQPPSEPCLGGGKGGGGGEDPGGPEGLNQ
HFHSHHPHHGASNYSDPPEPAMYLGAGVDPEEDSSLAPWRLFNLPRTKEAELPMPLLPWD
KLREEAAAQENLVSVTEVMSTTKWPLKVSEERLQMYRARRNQYLSAAITDHEPDVDPYAF
EEEDVKFTFSHKKDKTGGEPGKKHKGEDGGSSSSDEAQRAAAHNRMASTSLIHETDLAVS
INDLEHLFNSDEDELAPGSRRTVNGTDDKFGSKDSKSSTLDPVSCISSADMHQMFPTPPS
LEQHIMGYSPMNMCSKEYGSMEANMGMTSLDGTSSLGHFKIEVEESYCSPKPSEITDYSF
VYKPELCQSFVGCSMFAPLKMLPSQCLPPIKIPEDCIYRLSWREMLNPVMPVMSFLNKDS
NIPSVGSTMDQDYSQTYTPQTHTPFMSNSAPPSNSGTGILPSPTTPRFSAPTPRTPRTPR
TPRGPASVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVTLILSESVM
SLFKDCNFDSCCICVCNMNIKGADVGVYLSDPIGEAQEACSCGFSAVVNRRYGNGSGLFL
EDELDIIGRGSDVSREAEKRFEQLRLSSLERTGVGRGDRVPDELILLLQDQCTNPFSPIS
VLDDDIVTRGPSGAPVPPCVRVEERDYHSDCYMALEHGRQFMDNMSGGKVDEALVKSTCL
HHWAKQNAVDVSALCSQDVLRVLMSLQPVLQDAIQKKRTIRSWGVQGPLTWQQFHKMAGR
GSYGTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWEKLLLDPFGSQRDVGYLVVCPDNE
ALLSGAKSFFRDLTAVYESCRLGQHRPISKGYPDGIVLVGGSGAKNLVDQPVSDWFLKAA
SSNSDAFTKLKLYAQVCRHNLAPYLASQPLDSSLLTQSSPPPSSNQSSSTQQSSSTSGSV
GQQCPVNSAGSSVPNNNNSTNNSGSGNGPASSNSLVTSSGQPPPKPSSFPPFGNMGPQGQ
GGEQLGQQAGTQNTGTSGDNSSSQAPGPTEPLESTLEREKIGVPTDGESHAITYPPAIVV
YIVDPFSYEETDGGPGPVPSHSSVWTLGLLRCYLEMLQFLPPHIRNSISVQIVPCQYLLQ
PVRGEDRHIYAQHLKSLAFSVFAQCRRPLPISTNVKSLTGFGPGLAIDTALKSPERPEFL
RLYTPPFILAPTKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLATCTDLYGELLET
CIINIDVPNRARRKKGSVRRLGLQKLWDWCLGLVQMTSVPWRVVIGRLGRIGHGELKDWS
ILLSRRNLQSLSRRLKEMCRMCGISASDTPSILSVCLVAMEPQGSFIIMPDSVSTGSVFG
RSTTLNMQTSQLSTPQDTSCTHILVFPTSAFVQVASSNYTNIDPNIDILNANPDGPDAIG
IFDLLDQENEFVDPDIINISPNTSPVHSPGSHYHHGGDGSKGQSTDRMESHEEVPNLLQQ
PLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVSSVQSDELLHSKHSHPL
DSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPINFVVLNQMYNFIMNML
NT seq
6462 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgttatgtaccaaacggggccagcttggaggattgccattccaatctattc
tgtctggctgacttgacagggatcaaatggaagaggtttgtgtggcagggtcccacctct
gctcccatcctctctccagtcacggaggaggaccccatcctgtgcagcttcagccgctgc
ctgaaggcagacatactgagcgtatggcggcgcagtcagcggccggggcggagggagctc
tggctcttctggtggggggacgacccaaacttcgccgatctcatccaccatgagcttgca
ggcgaggatgttgggttgtgggagaacgggctttcctacgagtgtcgcacgctgctgttc
aaagccatccacaacctgctggagcgctgcctcatgaatcgcagcttcgttcggatcggg
aagtggtttgtcaaaccctacgagaaggacgagaagcccatcaacaaaagtgagcaccta
tcctgcgctttcaccttctttttgcacggggagagcaacgtgtgcaccagtgtggagatc
aaccagcaccagcccgtctaccacctgacggaggagcacctcaccctggctcagcaggca
tccagccccttccaagttatcctgagtcctttcggcctgaacgggaccctgacgggccag
tcgttcaagatgtcagacccgcccacccagaagctgatcgaggagtggaaccagttctat
cccatcagccccagcgccaagggggggtcgtcgtcggataaggcggaggacatggactgg
gaggatgactctctggcctccgtagaggtcctcgtaggtggtgtgcgaatggtttaccca
gcatgcttagtgctggttccccagtcagacatccctgttgtggcccctgtggggtcctcc
cactgcactgccgtctacccgggtggccaccaggtgcctgcttcccagcgagagcccgcc
atgtctttggtgacccttacccctcccacatcgcctgaggaggctcagacagtggactct
cactcggcccagaagtgggttaagatgccttcaacatctgatgcgttcagcgtggacaaa
acaagtcaccacggaggaaagattccacgccggttatccacccaggtggtggagcgcgtc
tggcaagagtgcaatatcaaccgagcccagaacaagcggaagttctcagccgcaaccaac
ggtacctgtgacgaagagctgagtgagaaagcggcagcctgggattttgtggagcattca
cagaggtcgtactgcagctgttccagatacaaatcaatgaagcagcgaacaggcagtacc
ccaggccaaacacctacatcgggccagccctcccagactccaaccaagcacaaagctggg
ggggagaagccagagaaaggtgacaagcagcagaaaagaccccagacgcccttccatcat
cgcagcatgaccatggacgacgcttccatggaggctgaggccaccgccggtcagaggata
gccatgagaggccaggacggagggagattcaatagtatgcgctctacggatgtgtctggc
atccaaaaaaacacccagctccattgtgggggggtcaacgtagggcagtcagaacagtcc
aactccccgcaacccccacctcttagcccccacccctgcgaggaatcaggggagggcatg
aagaacccttcaacccccaacagccaacacttttaccagcctccgtcggaaccctgcctc
ggcggggggaagggcggcggcggcggcgaggatcccggagggcccgagggtctaaatcag
cacttccactcccatcacccccaccacggagcctcgaactactccgacccccctgagccc
gccatgtatttgggcgcaggggtcgacccggaggaggacagctccctcgcaccgtggagg
ctattcaacctcccccgaacgaaagaagccgagctgcccatgccactactgccctgggac
aagctgagggaggaggccgcggcacaggaaaacctggtgtcagtcacagaggtgatgtct
acgaccaaatggccgctgaaggtgtctgaagaacgccttcagatgtaccgagccaggagg
aaccagtacctatcggctgccatcacagaccacgagccagatgttgacccctacgccttc
gaggaagaagatgtcaagttcacgttctctcacaagaaggataagacaggcggggagcca
ggaaagaaacataagggtgaagatggaggatctagttcgtcagatgaagctcagcgggcg
gcggctcacaaccgcatggcttccaccagcctgatccacgagaccgacctggcggtgtcc
atcaacgacctggaacacctcttcaattcagacgaggatgaactggcgcctggctccagg
cgaacggtgaatggaacggatgataaatttggcagcaaggattctaagtcctccactctg
gaccccgtgtcctgcattagttcagcagacatgcaccagatgtttcccacacccccctcc
ctcgagcagcacatcatgggctactcacccatgaacatgtgcagcaaggagtacggcagc
atggaggccaacatgggcatgacctcgcttgacggcacctcgtctctgggacacttcaag
atcgaggtggaagagagctactgcagtcccaagccatctgagatcacggactattcattc
gtttacaagcccgagctgtgccagtcgttcgtaggctgctccatgttcgctcctctgaag
atgttacccagccagtgtctcccacctatcaaaatcccagaggactgcatctacagactg
agctggagggagatgctcaaccccgtcatgcctgtcatgagcttcctcaacaaggacagt
aacatccccagtgtgggcagcaccatggaccaggactacagccagacctacacccctcag
actcacacgcctttcatgtctaacagtgctccaccaagtaacagtggcactggcatcctg
ccttcacccaccacccctcgtttctctgcccccaccccacgaacgccacgcaccccacga
acacctcgaggccctgccagcgtccagggctcactcaagtacgagaactcagacctttac
tccccagcgtccaccccctccacctgccgaccgctgaactcagtagagccagctacggtg
ccctccatccccgaggcccacagcctctacgtcaccctcatcctctccgagtcagtcatg
agcctcttcaaggactgcaacttcgacagctgctgcatctgtgtgtgtaacatgaacata
aaaggagccgacgtgggcgtgtaccttagcgaccccatcggcgaggctcaggaagcgtgc
agctgcggcttcagcgccgtggtcaaccggcgctacggcaacggctcgggcctcttcctg
gaggacgagctggacatcatcggccgaggctcagacgtcagcagggaggcagagaagcgc
ttcgagcagctgcggctctcctcgctggaaagaactggagtagggaggggcgaccgtgtc
ccagacgagctcatcctcctcctgcaggatcaatgcaccaaccccttttcacccatatca
gtcctggacgatgacatagtgacgcgggggccaagcggggcccctgtgccgccctgtgtg
agggtggaggagagggactaccacagcgactgctacatggccctggagcacggcaggcag
ttcatggacaacatgtcgggaggcaaggtggacgaggcgctggtgaagagcacctgcctg
caccactgggccaaacaaaacgcagtggacgtcagtgcgctgtgctctcaggatgtgctg
cgggtgctcatgtccctgcagcccgtactccaggacgcaatccagaagaagaggacgata
aggtcgtggggcgttcagggtcccctcacctggcagcagttccacaagatggctggacgg
ggctcttacggcacagacgagtccccggagcccctgcccatccccaccttcctggtgggg
tatgagtacgactttgtggtgctgtctcccttcggtctgccctactgggagaagctgttg
ttggatccctttggctcgcagcgggacgttggatacctggtggtctgtcctgacaacgag
gccttgctcagcggtgccaagagcttcttcagggacctcaccgctgtctacgagtcatgt
cggctgggccagcaccggcccatttccaaaggctaccccgatggcatcgtccttgttggc
ggcagcggagccaagaaccttgtggatcagccggtcagcgattggttcctcaaggctgcc
agcagcaacagcgacgccttcactaagctcaaactctatgcacaagtgtgccgacacaac
ctcgctccatacctcgcctcacagccattggacagttccctcctcacacagtccagcccc
ccgccctcgtccaaccagtcgtcatccacacaacagtccagctccacatcaggctcagtg
ggccagcagtgccccgtgaactctgcaggctcctcagttcccaataacaacaacagcact
aacaacagtgggtctggaaacggccccgcgtcctccaacagtctggtcacatcctcaggc
cagccgcctcccaagcccagctctttccccccctttgggaacatgggcccccagggccag
gggggggaacagctgggacagcaggctggtacccagaatactggcacctcaggggacaac
tccagcagccaggccccggggccaacagagcctcttgaaagcactttggaacgagagaaa
ataggcgttcccacggacggggagtcccacgccatcacgtatccacctgccatcgttgtt
tacattgtggaccccttcagctacgaggagacggacgggggcccggggccggtgccgtcc
cactccagtgtgtggacgctgggtttactacgctgctaccttgagatgcttcagttcctg
cccccacacatccgcaattctatttcagtacagattgtcccctgccagtacctgcttcag
ccagttcgaggagaggatcgtcacatctacgcccagcacctcaagtctctcgccttctcc
gtcttcgctcagtgcagacggccactgcccatctccaccaacgtcaagtcactgacgggc
tttggcccaggcctggctatcgacactgcactgaagagcccagagaggccggagtttctg
cgactctatacacctccgttcattctagcaccaacaaaggacaagcagacggagctcggg
gagacatttggggaggcatcgcagaaatacaacgtgctttttgtgggatactgtctgtcc
cacgaccaacgctggctcctggctacatgcactgacctgtatggggaactcctagaaacc
tgcatcatcaacatcgatgttcccaacagggcgaggaggaaaaaagggtctgttcggagg
ctgggcctgcagaagctgtgggattggtgcttgggactggtgcagatgacatcagtcccc
tggagggtggtgattggtcgactgggcaggataggacacggagagttaaaagactggagt
attctgctgagcagaaggaacctccagtccctgagtcgccgtctgaaggaaatgtgtcga
atgtgtggcatctcggcctcagatactcccagcatcctcagcgtttgcttagttgccatg
gagccccagggatcatttatcatcatgccagactcggtgtcgacaggctcagtgtttggc
cgcagcaccaccttaaacatgcagacgtcccagctgagcaccccccaggacacctcttgc
acccacatcctcgtcttccccacatccgccttcgtccaagtggccagctccaattacacc
aacatcgaccccaacattgacatcctaaacgccaaccctgatgggcctgatgctatcggg
atctttgacctgctggatcaggagaatgagtttgtggacccggacatcatcaacatctcg
cccaacacatcaccagttcactcccccggctctcattaccatcacgggggtgatggcagt
aagggccagagtacagaccgtatggagtctcatgaagaagttcctaaccttctgcagcag
cccctggcacttggctactttgtctccacggctaaagccggccccctacctgactggttc
tggtcagcctgtccgcaagcccagaaccagtgtccactcttcctcaaggcctctttgcac
ctccatgtgtcttcagtgcaatcagatgaactactgcacagcaaacactcccaccccctc
gactccaatcagacctcagatgtactcagatttgtgctggagcagtacaacgccctctcc
tggctgacgtgtgacccggccacgcaggaccgacgatcatgtctacccattaactttgtg
gtgctcaaccagatgtacaacttcatcatgaacatgttgtag
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integrated database retrieval system
