Gymnodraco acuticeps: 117538457
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Entry
117538457 CDS
T09661
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117538457 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117538457 (exosc2)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117538457 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
117538457 (exosc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
117538457
NCBI-ProteinID:
XP_034060058
UniProt:
A0A6P8T8E9
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MAADMRLPTIQKPVSLTFSAFDRKDLVVPGDVITSDTGFMRGHGTYVDEEKLTASVAGEV
QRVDKLICVKPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLTCGASMILGNNGFVWLYPTPEQLEEEAGGFYTSLEPVSVSDREVISRLRNC
LLALAAHKVLLFDTSVLYCYESSVHHQVKDILKPEVMEEIVMLTQQKLLDQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgatatgagattgccaactattcagaaaccagtgtcgctaacattttctgct
tttgaccgaaaagatctagtcgtcccgggcgatgttatcacttcagacaccggcttcatg
aggggacatggtacctatgttgatgaagagaagctgactgcttcagttgctggagaggtg
cagagagtagacaagctgatctgtgtcaaaccactaaagaccagattcaacggtgaggtt
ggagatgtggtggttggcagaatcacagaggtacaacagaaacggtggaaggtggaaacc
aactcccgtctggactctgttctcttgttgtcatctgtcaatctgcctggaggagagctg
aggagacgatctgcagaagatgagctcaccatgagggaataccttcaggagggcgatctc
atcagtgcagaggtgcagtccgtcttctcagatggagccctatcacttcatacccgtagt
ttaaagtatggaaaattgggtcagggagtgctggtacagctttctccttctctgatcaag
aggcagaaaacacatttccacaacctgacatgtggtgcatccatgatcctcgggaataac
ggctttgtgtggttgtatcccacaccagaacaactggaggaggaggccgggggcttctac
accagcctggagcctgtcagtgtgtcagatcgagaagtgatttcacggttgaggaactgt
ctactggctttggctgcgcacaaggtccttttgtttgacaccagtgttctctattgctac
gaatcttcagttcatcatcaggtcaaggacatcttgaagccagaagtgatggaggagatt
gtaatgttgacgcaacagaagctgttggatcaggaaggttaa
DBGET
integrated database retrieval system
