Gymnodraco acuticeps: 117538908
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Entry
117538908 CDS
T09661
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03420
Nucleotide excision repair
gacu04115
p53 signaling pathway
gacu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117538908 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
117538908 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
117538908 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gacu04121
]
117538908 (ddb2)
03400 DNA repair and recombination proteins [BR:
gacu03400
]
117538908 (ddb2)
Ubiquitin system [BR:
gacu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117538908 (ddb2)
DNA repair and recombination proteins [BR:
gacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117538908 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
EIF3I
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
117538908
NCBI-ProteinID:
XP_034060768
UniProt:
A0A6P8TAD2
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MKTRQAKSADESESKGRVKKKAGENSGPALSKKLRERKDGETSKQVPPLKSTGVQKRAGY
GSILHYLYKSTLGQNLHSQMKQCLQEPFVRSLSSYQFHGATSPFDRRITCLEWHPTHLTT
LAVGSKGGDIYLWDFEAPGKKTFLQGNGAGDFIGGMIFCPSDPSKLIVASGEGTLNMLSF
EGRPPTVLSRTQDCGHDHHHVCHWYCCVDVSVSRQMLVTGDNVGHLVLLGLDGQKIFSEK
LHKAKVTHAEFNSRCDWLLATASVDHTVKLWDLRNIKDKKSFLHEMPHDKAVNSAYFNPL
DCSKLLTTDQYDQIRIYSSPDWSKPQHIIQHPHRQFQHLTPIKATWHPVYDLIMAGRYPD
NRVCPGDQRTIDIFDSNTAELVCQLQDPAVSGIKSVNKFSPMGDVIGSGMGVSVLVWNRN
RLLMSDESTAQEETSASAESSGSQRRNRQHPSRERRGPALDAKLKKKLASLEETETKTKT
KSIKEKLAEMRKK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaagacaggcgaagtcagcagatgaatctgaatcaaagggaagagtgaagaaa
aaagccggggagaactctggtccagctctctccaaaaaactacgagaaagaaaagatgga
gaaacatccaaacaagtgcctcctctcaagtctacaggagtccagaagagagcagggtat
gggagcatcctgcactacctttacaagagcactctgggacaaaatcttcactcacagatg
aaacagtgtcttcaggaaccttttgtccgctcgctgtcttcatatcagttccacggggcc
accagccccttcgaccgcaggatcacctgtctggagtggcatcccactcacctcaccact
ctggctgtgggctccaaaggtggagacatatatctgtgggactttgaggcgcctgggaag
aaaacctttctccaagggaacggagcaggagactttattggagggatgatattttgcccg
tcagacccctccaaacttattgtggcttctggtgagggcacactgaacatgctgagcttt
gagggccgcccacccaccgttctgtcccgaactcaagactgtggccacgatcaccaccat
gtttgtcactggtactgctgcgtggatgtgtctgtaagtcgacagatgcttgtgacaggg
gacaatgtgggacatctcgtactcctgggtttggacggccaaaagattttcagtgagaag
ttgcacaaagccaaagttacccatgcagagttcaactcccgctgtgattggttgttggcg
accgcatcagtcgaccacacggtgaaactttgggacctgaggaacatcaaagacaagaag
agctttctccacgagatgccgcatgataaagctgtcaactcagcctatttcaaccctctg
gactgctccaagttgctcaccacagatcagtacgaccagatccggatctactcctctcct
gattggtcgaagcctcaacatatcatccaacatccacacagacagtttcagcatctcacg
cccatcaaggccacatggcaccctgtctatgacctcatcatggcaggccgttaccccgac
aaccgggtttgccccggagaccagaggaccatcgacatctttgactccaacacagcagag
cttgtgtgtcagctgcaagatcccgccgtctcaggtatcaaatctgtaaataaattcagt
ccaatgggtgatgtgattggatctggaatgggtgtgtcggtgctggtctggaatagaaac
aggttgttgatgagcgatgagtccacagcgcaggaggaaacttctgcctcagcggaaagt
tcaggaagccagcggaggaatcggcagcaccccagcagggagaggagaggaccggctctg
gatgcaaagctcaagaagaaactggcttctctggaagaaacggaaaccaagaccaagact
aagagtattaaagaaaagctagccgagatgaggaagaaataa
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integrated database retrieval system
