Gymnodraco acuticeps: 117539237
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Entry
117539237 CDS
T09661
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03013
Nucleocytoplasmic transport
gacu03015
mRNA surveillance pathway
gacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117539237 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
117539237 (acin1b)
03015 mRNA surveillance pathway
117539237 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117539237 (acin1b)
03041 Spliceosome [BR:
gacu03041
]
117539237 (acin1b)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117539237 (acin1b)
Spliceosome [BR:
gacu03041
]
Complex C
Other components
EJC/TREX
117539237 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
117539237
NCBI-ProteinID:
XP_034061185
UniProt:
A0A6P8TSC1
LinkDB
All DBs
Position
Unknown
AA seq
1319 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNALIKRLKGALMLENLQKSSSSHC
GLQPNSQIGEEMSQNSFIKQYLAKQQELLHERLEREAQQDEAVDESSAVQEEDEDHSEDN
DSSSYVSDKKNHSIPPKPLLPRAEERGGGDAGMVHGMMACGPDMGPGPTLPPQEFLEAPG
ARMQRATFHQGHKEPPAPSPPRAVASLSVRVLGQPDRQGLPPAVPRAQEKEGTAPSEPGS
AHPVLHLSRSAGVSGGSQAREDSDDDDSDDESEDDEDWGPGPGGARRGNRAPPQPQQMPP
SFPSTVARSKRKLQPPQHIPPPQVHHTPMQLRHPTPPPSPPPDLFPLPDTPKQSPPDTED
QEGDRPEASRGPRGPSFPPSSTMQRQDSDSSSRSSSPEPSMKRRPGPLSLLAHRMDSEGA
FRAAEATSAVDLSGEAAAHSTAAFASFGDSPLKRLERKRLQENRDVEEERRLKEEKEREQ
QQKQERERMKIQEQEIERGRLEEEEKQREKEQKRQEEEKERKRQEEEKIREEKLQKEKER
KHQEEEKIREEKLQKEKERKHQEEEKIREEKLKKEKERKHQEEEKIREEKQQKEKERKHQ
EEEKIREEKQQKEKERKHQEEEKIREEKLQKEKERKHQEEEKIREEKLQKEKERKQETVH
KGRVAVTEAQDSGSSSDSESSSHSSQSSSSSSGVKTGPARQLKKPNQGHKAEEEKKTDLS
KGAEKQHVSTREVSEPSAAAVTEVQPDPESSMAQQPPSGAEAESSEGRLEEGTNQKAFAA
RKISLTSSKTSPPATDGGAGDCESGTAAGRKRRWGSSSAVTTKKPSISITTDSLKSLIPD
IRVKEEAVVELHPEELQMSGDEESPDPSVGDQDKGLKIRRTVTQVVPGDAQENGQTNEEE
EVEKTEKEKRRRTSRDKRNNSVSEEAMETQISVKIEGDEKKVTPSDSLVRRSISQQKSGV
SVTIDDPVRTTRQPSPPQGKVSKIIHVTNLVRPFTLGQLKELLNRTGSVLEDCFWIDKIK
SHCFVTYGTTEEAVATRAALHGVKWPSSNPKVLNVDFCEQDEMDIHKGILKPEREKPHAV
APQSAPPSRLPPLMPERDHEREQNPEWDRGMGGVRELWVERQREMERRERARGEREWDRD
KVREFARPGEDRPRSRSRERRRRERAKSKERKTEKKGDEPPAKLLDDLFLKTKAAPCIYW
LPLSEEQAAHRTQERTEQQKERVQRRKERQEELEKKAEEERERLKERLKAREKDRGGAAA
AVASVGAAGRGAERERERGRDREPDRKRDGSNRPPPRPSVGAGAGRRSRSRSNPRDRRR
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacaatcgctccgggttgcggat
ttaaaagctgctttggagcaaagaaacctgcccaagagcggacagaaaaatgcgctcatt
aagcgactgaaaggggctctgatgctcgaaaatctccagaagtcgtcgtcttctcactgt
gggctgcagcccaactcgcagattggtgaggagatgagccagaatagcttcataaaacag
tacctggctaaacagcaggagctccttcacgagaggctggagagagaggcccagcaggac
gaagcagtagacgaaagctcagccgtgcaggaggaggatgaagaccattcggaggacaat
gacagctcctcctatgtcagtgacaagaagaatcactccataccccccaagcccttattg
ccccgggcagaggagagaggaggaggagatgcagggatggttcacgggatgatggcgtgc
ggccccgacatgggcccgggtcctaccctccccccgcaggagttcctcgaggctccagga
gctaggatgcaacgagccacctttcaccagggacacaaggagcccccggctccgtctccc
ccccgcgccgtagcctccctgtcggtgcgcgtcctgggccagcccgaccgccaggggctg
ccccccgccgtgccgcgcgcccaggagaaggagggcaccgcaccgagcgaaccgggatcc
gcgcaccccgtcctccacctcagccgatcagctggagtctcagggggcagtcaggctcgc
gaggacagcgatgatgacgacagtgatgacgagagcgaggatgatgaggattgggggccc
ggtcccggcggggcgcggaggggaaacagagcgccgccccagccgcagcagatgcctccc
agcttcccgtcaacagttgccagatccaaacgcaagctccagcctccccagcacatccca
ccaccacaggtacaccacacaccaatgcaactgcgccaccccacccctcctccctctccc
ccccctgacctgtttcccctacctgacactcccaaacagagcccaccagacacagaggac
caggaaggagataggcccgaggcttcacgtggtcccagggggccgtctttcccaccttcc
tccaccatgcagaggcaagactctgactcgagctctcgttccagcagtccggagccttct
atgaagcgaaggcccgggcccctctctctgctcgcacacaggatggactctgagggggct
ttccgtgcagcagaggccacctccgctgtggatctgtcaggagaggcggcggcacactcc
actgccgcgtttgccagttttggtgattctccgctgaaaagattggagagaaagaggctc
caagagaacagagacgtggaggaagaaaggcgcctgaaggaggagaaagagagagaacaa
cagcagaagcaggagagagaaagaatgaagatacaagagcaggagatagagaggggacgc
ctggaagaggaggagaagcagcgtgaaaaagagcaaaagcgccaggaagaggaaaaggag
aggaagcgccaggaagaggagaagataagagaggagaaactgcaaaaggagaaggagagg
aaacaccaggaagaggagaagatacgagaggagaaactgcaaaaggagaaggagaggaaa
caccaggaagaggagaagataagagaggagaaactgaaaaaggagaaggagaggaaacac
caggaagaggagaagatacgagaggagaaacagcaaaaggagaaggagaggaaacaccag
gaagaggagaagatacgagaggagaaacagcaaaaggagaaggagaggaaacaccaggaa
gaggagaagatacgagaggagaagctgcaaaaggagaaggagaggaaacaccaggaagag
gagaagatacgagaggagaagctgcaaaaggagaaggagaggaaacaggagacagtccac
aaaggcagggtggctgtgactgaggcccaagactcaggttcctcatcagactccgaatcc
tcttcacactcatcacaatcctcctcctcctcctccggggttaaaaccggccctgccaga
cagctgaagaagccaaaccaaggacataaagcagaggaggagaagaagactgaccttagt
aaaggggcagagaaacaacacgtttcaacaagggaggtgtcggagcccagcgcggccgcc
gtgacggaggtgcagccggaccccgagagctccatggcccagcagccgccctccggggcc
gaggcggagagcagcgagggccgcctggaggagggcaccaatcagaaggccttcgctgcc
cgtaagatatccctgaccagcagcaagacgtctccacccgccacagatggaggagcaggt
gactgtgagtcggggacggcagcggggaggaagaggcgatggggctccagctcggccgtc
accaccaagaaaccatccatcagcatcaccaccgactctctgaagtcgttgatccctgac
atcagagtgaaggaggaggcggtggtggagctgcacccagaggagctgcagatgtccggg
gacgaggagagcccggaccccagcgttggggaccaggacaagggcctcaagatcaggcgc
accgtcacacaggtcgtcccaggagacgctcaggaaaacggacagacaaacgaggaggag
gaggtggagaaaacggagaaagagaaacggcgcaggacttccagagacaaaaggaataac
agtgtttcggaggaagccatggaaacccagatatctgtcaagattgaaggagacgaaaag
aaagtgacccctagcgacagcctggtgcgtcgttccatcagtcaacagaagtccggcgtt
tccgtcaccattgacgaccccgtccgcacgaccaggcaaccctcaccgcctcagggcaaa
gtctcaaaaatcatccatgtgaccaacctggtgcgacccttcaccctgggccaactcaaa
gagctgctgaacaggacaggcagcgtgctggaagactgcttctggatcgacaagatcaag
tctcactgcttcgtcacatacggtaccacagaggaggcggtcgccaccagagctgccctc
cacggggtcaaatggccttccagcaatcccaaggtcctcaacgtcgacttctgtgagcag
gatgagatggacattcacaaaggcatcctgaagccagagagggagaagccccacgctgtc
gcaccccaaagtgctcccccgagccggctgccccccctgatgcctgagcgagaccatgag
cgggaacagaacccagagtgggaccggggcatggggggagtacgggagctgtgggtggag
cggcagagagagatggagcgccgggaacgagcccgtggcgaacgggaatgggaccgggat
aaggtccgggagttcgcccggccgggagaggacagaccccgctctcgatccagagagagg
aggaggagggagagggccaagagcaaggagaggaagacggagaagaagggagacgagcct
cctgcaaagctgctggacgacttgttcctgaagaccaaagcagcgccgtgtatctactgg
cttcccctctctgaggagcaggcggcacacaggactcaggagcgcaccgagcagcaaaag
gagcgcgtacaaaggcgcaaggagcggcaggaggagctggagaagaaggcggaggaggag
agggagcggctgaaggagcggctgaaggctcgggagaaagatcgcggcggtgcggcggcg
gcggttgcgagtgtcggagcggccgggcgaggagcagagagagagagggagcgcggccga
gacagggagcccgacaggaagcgggacggcagcaaccgaccccccccacgaccctctgta
ggagccggggcaggacgacgctcccgtagccgtagcaaccccagggatagacgccgctga
DBGET
integrated database retrieval system
