Gymnodraco acuticeps: 117539428
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Entry
117539428 CDS
T09661
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gacu03036
]
117539428 (chd5)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117539428 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
HDA2-3
PHD-1st_NSD
ResIII
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
117539428
NCBI-ProteinID:
XP_034061501
UniProt:
A0A6P8TCE2
LinkDB
All DBs
Position
Unknown
AA seq
2004 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDDDDEGERNTVPLTPLDSFFSDSDSLKQQKKQKPKKMK
EGKMPKVKKRKKEGGIQPRVDSDLEETSEVEEERERPEIGSESESSAYGPTKKKKKKPKE
KKEKKPRKKKRDEEDEDDDDDDGNMKEPKSSSQLMEEWGLEDVQYGFTEEDYKTITNYKA
FSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVA
QPTSVSSSQLSAQPGPIKKAKTKEGKGPGVRKRSKSVKDLKKKAKPKKTKSKSGQSVKKK
KASSSEEDFLEESDFDDISIHSASVLSDTSGAATKKKSRRGRKKRKKEDGDGYETDHQDY
CEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEDEEEE
PVGEEEDDHLEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLK
GKVQKILHWTWGEPPLPAEPPEGPDGLPGDPLINPPLKGRAEREFYVKWAGLSYWHCSWV
SELQLELYHAVMYRNYQRKNDMDEPPPFDYGSGEEELNNEKRRSKDPQYAAMEGRFYRYG
IKPEWLVMHRIVNHSFDKDGDVHYLIKWRDLPYDQCTWEGDDFDVPEYEIHKASYWDHRE
QILGEDQRPLVVRKGKKLKEDHQKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLE
GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWER
EFEMWAPDFYVLTYTGDKDSRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSY
ELITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEEL
FHLLNFLTPIRFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPSKTEL
IVRVELSPMQKKYYKFILTRNFEALNSKSGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEA
PVSSNGSYDGNQLVKSSGKVTLLQKMLRKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYK
YERIDGGVTGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHN
DIQAFSRAHRIGQNRKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSK
QELDDILKFGTEELFKDEIEAARAMGDNKDCEEGNVIHYDDDAISNLLDRSRDTTEDTEI
QNTNEYLSSFKVAQYVVKEEEGEEEVEREIIKQEENLDPDFWEKLLRHHYEQQQEDLARN
LGKGKRIRKQVNYNDTTQEDQEWQDDLSDNQSEYSMGSEDEDEDFEERPEGGRRHSRRQM
KNEKDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKS
EREFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHV
NGKLSSPDLIPIGMELKKLTESLSSDPNTPVPASPVATQPGTPIPPEKPESLLSAAEDKD
TTEQYGKKVSEQESSSAEAASAPEKAADSEESKASSEEKTGDERDRTESPSAKTEPSANS
KESASKQPELSASQTSPRIEPSKEPEKSSEKGDTDSPSTKTEDKESKPAVADDMKSEDAL
EGRLNGDKDMLDEMDDSRKEDKNGYKVKFMFNIADGGFTELHTLWQTEERAALSSGKMHD
IWHRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEVHKGNYLEMKNKFLARRFK
LLEQALVIEEQLRRAAYLNMTQDPSHSAMALNARFAEVECLAESHQHLSKESMAGNKPAN
AVLHKVLNQLEELLSDMKADVTRLPNMLSRIPPVSGRLQMSERSILSRLTSRGSEPPPQQ
PFSQGGFGCSQMYSSSFGGGFRGPGAQAMVNFSQMPLGPYVSVSSNGPPPPTSHLDKKSL
DSLRDVATPDLKSGKPSDVICIED
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaagacgacatggattttgaagacgat
atgccagatgatgatgacgaaggtgagcgcaacaccgttcccctcacacccctcgacagc
ttcttctccgacagcgactcccttaaacaacaaaagaagcagaagcccaaaaagatgaaa
gagggcaaaatgcccaaagtaaagaagaggaaaaaggagggtgggatccagcccagagtg
gacagcgacctggaggagacctcggaggtggaggaggagcgggaacgtccagaaatcggc
tctgagagcgagagcagcgcgtacgggccgaccaagaagaagaagaagaagcccaaggag
aagaaagagaagaagcccaggaagaagaagagggatgaggaagatgaggacgatgacgat
gatgatgggaacatgaaagaacccaaatcctccagtcagctgatggaggagtggggtctg
gaagacgtgcagtatggcttcaccgaggaagactataaaaccatcaccaactacaaggcc
ttcagccagttcctcaggcctctcattgccaagaagaacccgaagattcccatgtcgaag
atgatgacagtgttaggggccaagtggcgcgagttcagcgccaacaacccgttcaaagga
gcatctgccaccgctgtggccgccgctgtggctgccgccgtggaaacggttaccgtggca
cagccgacgtccgtcagcagcagccagctgagcgctcagccggggcccatcaaaaaagcc
aaaaccaaagagggaaagggacccggagtgaggaagaggagcaagtctgtgaaggacctg
aagaagaaagccaagcccaaaaagaccaaatcaaagtcgggccaaagtgtgaagaagaag
aaagcgtcctcgagtgaggaggacttcctggaggagtccgactttgatgacatcagcatc
cacagtgcctcggtgctttctgatacctcgggggccgccaccaagaagaaatcccgacgt
gggcggaaaaaaaggaaaaaggaagatggggacggctatgagacggaccatcaggactac
tgtgaggtttgccagcaggggggagagatcatcctgtgtgacacctgcccccgagcgtac
cacctggtgtgtctggacccggagctggagaaggcccccgagggcaagtggagctgtcca
cactgtgagaaagaggggatccagtgggaggcaaaagacgaggaggacgaagaggaggag
cccgtaggggaggaagaggacgaccacctggagttctgcagagtgtgtaaagatggggga
gagctgctgtgctgtgacacctgcccatcgtcctaccacatccactgcctcaatcccccc
ctgcccgagatacccaacggggagtggctgtgtccacgctgcatgtgccctcccctgaaa
ggtaaggtccagaagattctgcactggacgtggggagagcccccgctgccagcagagccg
cctgagggccctgatggcttgccaggtgatccgctgatcaaccctccgctcaagggccgc
gcagagcgggagttctacgtgaagtgggccggcctctcatactggcactgctcctgggtc
agcgagctgcagttggagctgtatcacgcggtcatgtatcggaactaccagcgtaagaac
gacatggacgaacctccgccatttgactacggctcgggtgaggaggagctcaacaacgag
aagaggaggagcaaagacccccaatacgctgcgatggaggggcgcttctaccgctacggc
attaaaccagagtggctggtgatgcaccggatagtaaaccacagtttcgataaggacgga
gatgtgcattacctgatcaagtggagagacctgccctacgaccagtgcacctgggagggg
gatgactttgacgtcccggaatatgaaattcacaaagcttcttactgggaccacagggag
caaatactcggtgaggaccaacgccccctggtggtgaggaaaggaaagaaactcaaagag
gaccatcaaaagagggaggtccctcctgacgctcccatcatagatccaaccatcaagttt
gagcaccagccgtggtacattaacgccacggggggcacgctgcacccctaccagctggag
ggtctgaactggctgcggttctcctgggctcagggcaccgacaccatcctggctgatgag
atggggctggggaagacggtgcagaccatagtgttcctctactcactctataaggagggt
cactcgaaggggcccttcctggtgagtgcgcccctctccaccatcatcaactgggagagg
gagtttgagatgtgggctccggacttctacgtgttgacctacaccggagacaaagacagc
cgggcgatcatcagggagaacgagttcaccttcgaggacagcgccgtgaagtccggacgc
aaggtgttccgcatgaagaaagacactcccatcaagttccacgtgctgctgacctcttac
gagctgatcaccatcgatcaggccatcctgggctccatcacctgggcctgcctggtggtg
gacgaggcccaccgactgaagaacaaccaatcaaagtttttcagaatcctcaacgggtat
aagatctactacaagctgctgctcactgggactcctcttcagaacaacctggaggagctg
ttccacctgcttaacttcctcacccctatacgcttcaataacctggaaggcttcctggag
gagtttgctgatatctctaaggaggaccagatcaagaagctccacgacctgctgggccct
cacatgctcagacggctgaaagcggacgtcttcaagaacatgccttcaaagaccgagctg
atcgtccgggtggagctcagccccatgcagaagaaatactacaagttcattttgacacga
aatttcgaggctctgaactcgaaaagtggagggaaccaagtgtcgctgctcaacattatg
atggacctgaagaagtgctgcaaccatccctacctgttcccagtggctgctgtggaagct
cctgtgtcatccaacggctcgtatgatggcaaccaactggtgaagtcctcaggaaaagtg
acgctgcttcagaaaatgctgaggaaactcaaagacgaaggacacagagttctcattttc
tctcagatgacaaagatgttggatctgcttgaggacttcctggagttcgagggttataaa
tatgaacgtattgatggaggagttacaggaggcctgaggcaggaggccattgaccgcttc
aatgcccccggcgctcagcagttctgcttcctgctttcaactcgagctggaggtcttggc
atcaacctcgcgagtgctgacaccgtcatcatctacgactcggactggaaccctcacaat
gacatccaagctttcagcagggctcatcgtataggccaaaacaggaaggtgatgatctat
cgctttgtgacgcgcggctcggtggaggagcggatcactcaggtggcgaagaggaagatg
atgctgacccacctggtggtgaggcccggcctgggctccaaaactggatccatgtccaaa
caggaactggacgatatcctcaagttcggcaccgaggagcttttcaaagatgaaatagaa
gcagcacgagccatgggtgacaacaaagattgtgaagagggaaatgtgattcactacgat
gatgacgccatctccaacctgttggaccgcagtcgggacaccaccgaagacacagagatt
cagaacacaaacgagtacctgagctccttcaaggtggctcagtatgtggtgaaagaagag
gaaggagaggaggaggtagagcgggagattatcaagcaggaggagaacttggatccggac
ttctgggagaaactcctccgtcaccactacgagcagcagcaggaggacctggcccgcaac
ctggggaaaggcaaacgcatccggaagcaggtcaactacaacgacaccacccaggaggac
caagagtggcaggatgatctttcagacaatcagtcggagtactccatggggtccgaggac
gaggacgaagatttcgaggagaggcctgaaggaggacgcagacactctcgtcggcagatg
aagaatgagaaggacaaacctctgcctcccttactggcacgggttgggggcagtattgag
gtgctggggttcaacgcccggcagaggaaagccttcctgaacgccatcatgcgttggggc
atgccccctcaggacgccttcaactcccattggctggttcgagacctgagagggaagagc
gagcgtgagttcagggcctatgtgtctctgttcatgagacatctgtgtgagccgggggca
gacggagcagagacgttcgctgacggagtcccacgcgagggactgtctcgtcagcacgtt
ctcaccaggatcggagtcatgtccctcgtcaggaagaaggtgcaagagtttgagcatgta
aatgggaagctgagttctccggacctgattcccatcggcatggagctgaagaaactgacg
gagagtttgtcttcagatcccaacacgcctgttcctgccagccctgtggccacgcagccg
ggcacccccatcccaccagagaagcctgagtctctcttgagtgctgctgaagacaaggac
accacagagcaatatggcaagaaagtttcagaacaggaatcttccagtgccgaggcagcg
tctgcacctgagaaggcggctgacagcgaggagagcaaggccagctctgaggagaaaaca
ggagatgagagggacagaaccgagtcgccctctgcgaagactgagccatctgccaactcc
aaggagtctgcttccaaacagccagagctatcagccagtcaaacctcgcctagaattgag
cccagcaaggaaccagaaaagtcctcagaaaaaggagatactgattctccttcgacaaaa
actgaagacaaagaaagtaagccagctgtggcagacgatatgaagagtgaagatgcatta
gagggtcgattaaatggagataaagacatgttggacgagatggatgacagcaggaaggag
gacaaaaatggatacaaagtcaagttcatgttcaatatcgctgatggaggttttacagag
ctgcacaccctctggcagactgaggagcgagcggcgctgtcttcaggaaagatgcatgac
atctggcaccgtcgccatgactactggctcttagccggcatcgtaacacacggctacgct
cgttggcaggacatccagaatgacccgcgttatgctattctgaacgagcccttcaaaact
gaggttcataagggcaactacctcgagatgaagaacaagttcctcgcacgccgctttaag
ctgttggagcaggctctggtgatcgaggagcagctgaggcgggcagcgtacctgaacatg
acccaggaccccagccactccgccatggccctcaacgcccgcttcgctgaggtggagtgt
ctggccgagtcccaccagcacctgtccaaagagtccatggccgggaacaagcctgccaac
gccgtgctgcacaaagtgctgaaccagctggaggagcttctgagtgacatgaaggctgat
gtaacccggctgcccaacatgctgtcccgcatcccgccggtgtctggccgcctccagatg
tctgagcggagcatcctgagccgcctcaccagccggggcagcgagccccccccacagcag
cctttcagccagggggggttcggctgctcccagatgtacagcagcagctttggggggggc
ttcagaggaccgggggctcaggccatggtcaacttcagccagatgcctctgggaccctac
gtcagcgtgtcctctaatggccctccgccccctacaagccatctggataagaagtcactt
gactccttgagagacgtggccacgcctgacctcaaatcaggcaaaccgagtgatgtcatc
tgcatagaggactag
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integrated database retrieval system
