Gymnodraco acuticeps: 117539557
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Entry
117539557 CDS
T09661
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117539557 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117539557 (smarcd1)
03036 Chromosome and associated proteins [BR:
gacu03036
]
117539557 (smarcd1)
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117539557 (smarcd1)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117539557 (smarcd1)
PBAF complex
117539557 (smarcd1)
GBAF(ncBAF) complex
117539557 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
117539557
NCBI-ProteinID:
XP_034061651
UniProt:
A0A6P8TCQ6
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MAARGGFQSAPTGGVVGAMGPGPPVQGAGPGMGPGTPTGRMVPSSAQQNHMYRSPMPGPG
YPRPGMPPSNRMTPQGPAMGPPGYGNSPVSRPVMPGVMDPSRKRPAPQQIQQVQQQNRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDSAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQILIPERPTHPRIKKQN
GTEIFETQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKT
QMNSFLLSTASQQEIAGLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRD
LKTMTDVVGNPEEERRADFYYQPWAQEAVCRYFYSKVQQRRQELETALGIRNT
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagagggggatttcagtcggcaccgacgggcggtgttgttggagcaatggga
cccggaccaccggtacagggcgcaggaccaggcatgggtcccgggactcctacgggacgg
atggtaccgtcgtcggcccagcagaaccacatgtaccgttccccgatgcccgggcctggg
tacccgagaccgggcatgcccccatccaatcgcatgaccccacaggggccggccatgggg
cccccaggatacggcaacagccccgtgtctcgccccgtgatgcccggcgtgatggacccc
tcccgcaagaggcccgcgccccaacagatccagcaggttcagcagcagaaccgcaaccag
cacacaaagaagaagaagatggctgataaaattctacctcagaggatcagggaactggtc
cccgagtctcaggcttacatggatctgctggctttcgagaggaagctggatcagaccatc
atgcgcaagaggctggacattcaggaagccctgaagaggcccataaagcaaaagagaaaa
cttcggatcttcatatccaacaccttcaacccggcaaagcctgatgcagaggatggagag
ggcacagttgcatcatgggagctgcgtgttgagggccgtctgctggaagattcggctgtg
tccaagtatgaggccaccaagcagaagaggaagttctcctctttcttcaagtctctggtg
atcgagctggacaaagacctgtacggcccagacaatcacctggtggaatggcacaggact
gccaccacccaggagactgatggtttccaggtgaagagacccggtgatgtgggggtccgc
tgcaccgtcctgctgatgctggactaccagccccctcagttcaagctggacccccggctg
gctcgtatgctgggcatccacacccaaaccagacctgtcatcatccaggctctgtggcag
tacgtcaagacccacaagctccaggaccctcatgagcgcgagttcatcaactgtgacaaa
tacctgcagcagattctaataccagagagaccaacacaccccaggataaaaaaacagaac
gggacagagatctttgagactcagcgaatgaagttctctgagatccctcagcgcctgcat
gccctcctgatgcccccagaaccaatcatcatcaaccatgtgatcagtgtggaccctaat
gaccaaaagaagacggcttgctacgacattgacgtggaagtggacgacacgctgaagacc
cagatgaactccttcctgctgtccactgccagtcagcaggaaatagccggactggacaac
aagatccatgaaaccattgagaccataaaccagctgaagacccagagagagttcatgttg
agttttgccagagaccctcagggctttatcaacgactggctgcagtcccagtgccgagac
ctcaagaccatgaccgatgtggtcggaaacccagaagaagagcggagagccgacttttac
taccagccgtgggctcaggaggccgtctgccgctacttctactccaaggtccagcagagg
aggcaggagctggagacggcgctcggcatcaggaacacctaa
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