Gymnodraco acuticeps: 117539925
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Entry
117539925 CDS
T09661
Symbol
rbl1
Name
(RefSeq) LOW QUALITY PROTEIN: retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04110
Cell cycle
gacu04218
Cellular senescence
gacu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117539925 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117539925 (rbl1)
04218 Cellular senescence
117539925 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gacu03000
]
117539925 (rbl1)
Transcription factors [BR:
gacu03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
117539925 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
SLH
Motif
Other DBs
NCBI-GeneID:
117539925
NCBI-ProteinID:
XP_034062173
UniProt:
A0A6P8TE66
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MRGEESSDSESGRMEESSVRRSLETLCQELNMDEQTAAETLENFTAIWNTYTLEGEVVHW
LACSLYAACRKGSTPTVGKGLMEGNCVSLTRILRTAKLSLIQFFSKMRKWADMSSLSQDF
RLRMDRLERNFEVSTVIFRKFEPIFMDMFQNPQGGEPPRQPRSRKHRRLPCHISDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKDLINPTFRGLPALYRAD
GHVSPDQPPPCVLERLCELHDGLVVEAKGIKQHYFKPYIQKLYQKQILRGNEDNLTELLD
PQSFIDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKTVQETSASRNNAQSQM
KQHVEKSASLAPSTPLTGRVYLKEKDLLVTPVSSATQSVSRLQSMVSGLRTAPSENMLQV
FRSCSRNPTESLLARVKTLGQTFKEHYTNDSEDMPGSHIDFAENRLKLAEILYYKVLENV
MVQETKRLPGKDMSVLLEQDMFHCSLMACCLEVVLFSYSSQRTFPWIINIFKLTPFYFFK
VIEVFIRSEEGLSRDMVKHLNLIEEQVLDSRAWSADSALWSVLQAAGNKVPTVEEVNFSS
SLDTGSGPGSSGVQSHLPMLALSPIIHPRIKEFRSGLGSARKDVPPSPLSLHDRYSSPAA
GSAKRRLFGDDSPAPLTATLSPMSMSSPAKRLTFTSSSTLRIGGQGGGGTVLSIPLQGLN
NDRTITLIPVQPCDSSGTITAQFLLTTSPSRPPPPPPMTSDPPAAGSGRPRRTGSLALFF
RKVYHLASVRLRDLCVKMDVSSELRGKIWTCFEHALVHCTALMKDRHLDQLMLCCVYIIS
KITKETHTFHDIMKCYRGQPQASSHVYRSVLLRHTPREQVTDENMEVDPVSGGESAEKTN
QASGEANTDQSGEEERGDLIQFYNSVFVLKMKSFALRYAVHDNRVDAPPLSPFPSVRAQP
LSPRRVSQRHSLYVSPHKNSAACLTPNSYTYRINSSPSKELSDINRMIRQGSSVSRKRAF
TMEGDVMMSSACDSPSKRACPENSPDVLLKRLQVVVSERQSH
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgaagagtcgtccgattctgagtcgggcaggatggaggagagctcggttcgg
aggagcctggagactctgtgccaggaactgaacatggacgagcagacagccgcagaaaca
ctggagaacttcactgccatctggaacacatacaccctggagggggaggtggtgcactgg
ttggcctgctctctgtacgctgcctgcaggaagggctccactcccaccgtgggtaaagga
ctgatggagggaaactgcgtgtctctcaccaggatcctccgcaccgccaaactcagtctg
atccagttcttctctaagatgaggaagtgggccgacatgtcgagcctctctcaggacttc
cggctacgcatggatcgactcgagaggaacttcgaggtctcgaccgtcatcttccgcaag
tttgagcccatcttcatggacatgttccaaaacccgcaggggggggagccgcctcgacag
ccacgcagcaggaagcacaggaggttgccgtgtcacatcagcgatgtgttcaagttctgc
tggactctgtttgtctacacaaaaggtaacttccgtatgatcggagacgacctggtgaac
tcgtaccacctgctgctctgctgcctggacctggtgttcggaaacgctctgctctgcgcc
aacaggaaggacctcatcaaccccaccttcagaggcctgcctgctctgtaccgcgctgac
ggccacgtgtctccggaccagccccccccctgtgtgttggagcgtctctgtgagctgcat
gatggcctggtggtcgaggccaaggggatcaaacagcactacttcaaaccatacatccag
aaactgtaccagaaacagatcctgagaggaaacgaggataatttgaccgagctgttggac
cctcagagcttcatcgataacaacaaagccataaacagggagtatgaggagtacgttctg
acggtgggagatttcgacgagcgagtgtttctcggcgcagacgctgacgaggaaatcggg
acgccgaggaagaccgtccaggaaacgtctgccagccgaaacaacgctcagagtcagatg
aagcaacacgtggagaagtcggcctctcttgccccctccacccctctcacagggcgggtg
tatctgaaggagaaggatctgctcgtcactcccgtttcctcggcaacgcagagtgtcagc
cggctgcagagcatggtgtccggtctgaggacggcgccgagcgaaaacatgctgcaggtc
ttcaggtcgtgctccagaaatcccaccgagtcgctgctggccagagtcaagaccctcgga
cagacgttcaaagaacattacaccaacgactccgaggacatgcccggctctcatatagat
tttgcagagaatcgtctgaagctggcagagatcctctactacaaagtcctggagaacgtc
atggtgcaggagaccaagcgcctgcctgggaaagacatgagtgtgttattggagcaggat
atgttccactgctctctgatggcgtgttgtctggaggtcgttctgttctcctacagctcc
cagaggaccttcccctggatcatcaacatcttcaaactcacacccttctacttcttcaag
gtgatcgaggtattcatccgctcggaggaaggtctctccagagacatggtgaagcacctg
aacctgatcgaggagcaggtgctggacagcagggcctggagcgcagactctgccctctgg
agcgtcttgcaggctgcaggcaacaaagtgcccacagtggaggaggtgaatttctcctcc
agtctggacacgggttcaggtcctggctccagtggagttcagtctcacctgccgatgctc
gccctctcgcccatcatccacccccgcatcaaagagttcagatcgggcctgggcagcgca
cgcaaagacgtgcctccctccccgctgtcgctccacgacaggtacagctctccagcggca
ggcagcgccaagcgacgtctcttcggcgatgattctccggcgccgctgactgcgaccttg
agcccgatgtcgatgtcgtcgcccgccaaacgcctgacgttcacctccagcagcaccctg
aggatcggaggtcagggcggggggggcaccgtgctcagcatccctctgcaagggctgaat
aacgaccgcaccatcacactgatcccagttcagccgtgtgattcctccggtacgatcacc
gctcagttcctgctcaccacctccccgagtcgcccccctcctccccctcccatgacctct
gaccccccggcggcaggaagcggacgcccgcgacgcaccggctccctcgcgctgttcttc
aggaaggtgtatcacctggccagtgtgcgtctgagggatctgtgtgtgaagatggacgtg
tcgtcggagctgcgggggaagatctggacgtgtttcgaacatgcgttggttcactgcacg
gctctgatgaaggaccgacacctcgaccagctgatgctctgctgcgtgtacatcatatcc
aaaatcaccaaagagactcacaccttccacgacatcatgaagtgttaccgtggccaacca
caggccagcagccatgtgtaccgcagtgtgttactgcgtcacactcccagagagcaggtg
actgacgagaacatggaggtggatcctgtctcaggtggagaatcggcagagaagaccaat
caggcgtcaggagaagccaacaccgaccaatcaggagaggaggaacgcggtgacctcatc
cagttctacaacagcgtcttcgtcctgaagatgaagagcttcgcgctgagatacgccgtc
catgacaaccgggtggacgccccccccctctctccgttcccctcggtgcgcgctcagcct
ctctccccccgcagggtttctcagagacactcgctctacgtttctcctcacaagaactct
gcggcctgcctcacaccgaactcctacacatacaggatcaacagcagcccctccaaggag
ttgtcggacattaaccggatgattcgtcagggctcctcggtcagcaggaagagggccttc
accatggagggcgacgtgatgatgtcatcagcgtgtgactcccccagtaagagggcgtgt
ccggagaacagccccgacgtcctgctgaagcgcctgcaggtcgtcgtgtccgagcgacag
agtcactaa
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