Gymnodraco acuticeps: 117540613
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Entry
117540613 CDS
T09661
Symbol
usp40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gacu01002
]
117540613 (usp40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gacu04121
]
117540613 (usp40)
Enzymes [BR:
gacu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117540613 (usp40)
Peptidases and inhibitors [BR:
gacu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117540613 (usp40)
Ubiquitin system [BR:
gacu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117540613 (usp40)
BRITE hierarchy
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117540613
NCBI-ProteinID:
XP_034063280
EnsemblRapid:
ENSGAUG00000017940
UniProt:
A0A6P8TXF9
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MFGNLFEEEEEEGFSSTSSGGRVAKGGDEPPPPRGISTLCGIKNQGGTCYLNSLLQTLLF
TPEFRGELFSLGADELGCLEDKDKPGAKVRVIPLELQRLFASLLLADQQSASTADLTDSF
GWNSSEGTNQHDVQELNRILFCALEHSLVGTTGSTFIHQLYHGTIVNSIACKECGNVSQR
QEDFLDLTVCVCGVSSLEEALWNMFVEEELFEGNNLYRCGQCDRLVTAAKSAKLKKLPPF
MTMSLLRFSFDYAKCERYKETGRYVFPLNINLRPFCEETDGEDSDYSYELFSVIIHKGGC
YGGHYHVYIRDIDQLGQWEPPEEECKNKTQKKVKDEVKQMCEPKLQEDDPLSVISAIITQ
EPSKSVLLDQLGQKIMDKISSSWSKKFRKPYGPIGKFLQSHNDVFMLVSNGTRVALKANP
PSPVTETPSPAEQTTDSDPSTPADPGAAEELEPDQKPEPEQKQGSHWFDLNDSAVTSIRE
SDIEKQFQGKESAYMLFYRKTRLQRPSEALKNPEYKVPLNLIKMAQEENIRVQKMREEFE
ASNNTVELHLHLAPSYRLENGALQPISKEQSASTPLSFDRRKTVGDLRLAIYQMQELWEG
DMALTVARSLPAGLHLYTTLIDDGVSLYSAGICTNSDLFVWNGREVCGAAVLTGAEWEPV
LLNVVRPFLEDCVQEKADEMECEEGRESFENGGPGLKREARGFAGAATLGEVREALGEPQ
ESLLCQEHKGGKRGEQGAGEGGGASGWRVFPPDDMHRTLKELSLKDGDALLVLEPQSFDS
SVFTRNGDVVTVTTPSDCRWLQVEFRPHGGGGEEGDKEEERRKIKVPASGNMLLCEVKQR
AIEELQIEEQTSGAQHCLRQVDCTGKLLPPVCEELSVRDAGVRLMTTLTLCPGNAPKASQ
LFLHFSVGTAPSAGFEKDILVDKSCTVKECLKAMLDDVGLDGTCWHLRRLDWCEEVGEPI
MDEDAPLSELKINNGETLIVTEGQLPPKGYLKLSVWLYLDPRNNSSDFTGFNHTDNGHTE
EQMLELLTASETHSPSPPLCAGNTAELRSAGQVEISDEATLEDLKTQVLTLPALQDVCVP
ITAFMRVWQLECQRMARILRGQQLTLKKLKLTSGMDLCVQPLLQEEDLGPKDVMLNVKMG
VPGERCFYPTEELVWDAARDSSPRSLRTCLAAHYGLSPDSLLLAKHQPDKHTWEEMSTWN
QQASKKKKKRKAESVLGAPFHLKDGDTVGIKNLLIDNNRNFLTLEDERGQQRLREQAEQR
RKGGPAADSDGVGTQKKAGPNKSRKPEVALSINVGVFR
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggaatcttttcgaggaagaggaggaggaaggcttctcttcgacctcctccggt
gggagagttgcaaaggggggagacgagccacctccaccccgaggaataagcactctgtgc
ggcatcaagaaccaggggggcacctgctacctcaactccctgctccagaccctgctgttc
accccagagttcagaggggagctgttcagtttgggagcagatgaactaggatgcctggaa
gacaaagacaaaccaggggccaaagttagagtgatcccactggagctacagagactgttt
gccagtctgctgctggcggaccagcagagcgcctccactgcagaccttaccgacagcttt
ggctggaacagcagcgagggaacaaatcagcatgatgtgcaggagctgaacaggattttg
ttctgcgcgttggagcactctcttgtgggcaccaccggtagcacgtttatccaccagctg
tatcatgggaccattgtcaacagtatcgcctgcaaggagtgtggaaacgtcagccaaaga
caggaggacttcctggacctgacagtgtgtgtttgtggcgtgtcgagcctggaggaggct
ttgtggaacatgtttgtggaggaagagttgtttgagggcaataacctgtaccgctgtggg
cagtgtgacaggctggtcactgctgccaagtctgccaagctgaagaagcttcctcctttt
atgaccatgtctttgctgaggttcagctttgactatgccaaatgtgagcgatacaaggag
acgggacgctacgttttccccttaaacatcaacctacggccattttgtgaagagacggat
ggagaggactctgattactcctacgagctgttctctgtgatcatccataagggtggctgc
tatggaggccattaccatgtttatatcagggacatagaccagcttggccaatgggagccg
ccggaagaggaatgcaaaaataagactcagaagaaagtgaaggatgaggtcaagcaaatg
tgtgagccaaaacttcaagaagacgaccctttgtctgtcatcagtgctattattacacag
gagccatcaaagagtgtcctgttggaccagctgggacagaaaatcatggataaaatcagt
tcatcctggagcaaaaagttcagaaaaccctacgggcccataggaaagttcctgcagtcc
cacaatgatgttttcatgctggtgtccaatggcactcgagtggcattgaaggcaaaccct
cctagccctgtgactgagacccccagtccagcagagcagaccactgactctgatccttca
actcctgcagaccctggagctgcggaagagctcgaaccagaccagaagccagagcccgaa
caaaagcagggtagccactggttcgaccttaacgactctgcggtgacctccatcagggag
tctgacatagagaagcagttccagggcaaagagagcgcatacatgctgttctacagaaaa
acacggctgcaaaggcccagtgaagctttgaaaaatcctgagtataaagttcctcttaac
ctcatcaagatggctcaggaggagaacatcagagtgcagaaaatgcgtgaggagtttgaa
gcttctaataacaccgtggagctgcatctccacctcgcaccctcttataggctagaaaat
ggagccctgcaaccaatcagcaaagagcagagcgctagcacacctttgagtttcgaccgt
agaaagactgtgggagatcttcgattagctatataccagatgcaggaactctgggaaggg
gatatggctctgactgtggcccggagtctccctgcaggtctacacctctacactacactt
atagacgacggtgtctccctgtacagtgccggcatttgtacaaactctgacctgtttgtg
tggaatggcagagaggtgtgcggtgcggctgtcctaactggagccgagtgggagccagtg
ctgctgaatgtggtccgtccctttctggaagattgtgttcaggaaaaggcagatgagatg
gagtgtgaggaggggagagaaagttttgaaaacgggggtccagggctcaaaagggaggcg
agagggtttgcaggtgctgcgactctcggggaggtgagggaggcactgggggagccacag
gagagtctgctgtgccaggagcataagggaggaaagagaggagaacagggggcaggggag
ggaggaggggcgagtgggtggagggtgttcccccccgacgacatgcaccggacgctgaag
gagctgtcgctgaaggacggcgatgcgctgctggtgctggagccgcagtccttcgacagc
agtgtgttcactcgaaacggagacgtggtcactgtgacgacgccttccgactgccgctgg
ctccaggtggagtttcgaccacatggaggagggggagaagaaggggataaagaagaggag
aggaggaagattaaggttccagcttcaggaaatatgctgctgtgtgaggtgaaacagagg
gccatagaggagctgcagatagaggaacaaacctcaggtgcacagcactgcctgagacag
gtggactgcacagggaaactccttcctccagtgtgtgaggagctgagtgttcgggatgca
ggagtgcgcctcatgaccacactcactctctgtccgggaaatgcccccaaggcttcacag
cttttcttgcacttctctgtgggcacagcgccctctgctggctttgagaaggacatactt
gtggataaatcatgtacagtaaaagagtgtctaaaggcaatgctggatgatgttggactt
gatggcacctgttggcacttaagaaggctcgattggtgtgaggaggttggagagccaatc
atggatgaggatgctcccctgtcagagctgaagataaacaatggagagactttaatcgtc
acagaaggacaacttcctccaaagggttatctcaagttatccgtgtggctgtatctggat
cccagaaacaactcgtcagatttcacaggttttaatcacactgacaacggccacactgag
gagcaaatgctggagcttttgactgcaagtgaaacgcacagtccctcaccccccctctgt
gccggcaacacggcagagctcagaagtgcaggacaggtggagatatcagacgaagccacg
ctggaggacctcaagactcaggtgttgacgctgcctgctcttcaggatgtgtgtgtgcca
atcactgctttcatgcgtgtgtggcagcttgagtgtcagaggatggcacgcatcctcaga
ggacagcagcttacactcaagaaattgaagctgaccagtggtatggatctttgtgtgcaa
ccgctattacaagaagaagatcttggtcctaaggatgtgatgctgaatgttaaaatggga
gtaccaggggagaggtgtttctaccccacagaggagctggtttgggatgcagcccgagac
tcgtctcctcgctctctgcgcacctgtctggctgctcactacggcctctcccctgactct
ctgctgctggccaaacaccagccggacaaacacacctgggaggaaatgtccacctggaac
cagcaggcttccaaaaagaaaaagaagagaaaggcagagtcagtactgggagcgccattt
cacctcaaagatggcgacacagtaggcatcaagaatcttttgattgacaacaacaggaac
ttcctgaccctggaggatgagcggggccagcagaggctcagggagcaggccgagcagcgc
aggaaaggagggccggctgcagactcagacggtgttggaacacagaaaaaggctggacct
aacaaatccaggaaaccagaagtagcgctgtcaatcaacgttggggtattcagatag
DBGET
integrated database retrieval system
