Gymnodraco acuticeps: 117540876
Help
Entry
117540876 CDS
T09661
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gacu04131
]
117540876 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gacu04147
]
117540876 (copa)
Membrane trafficking [BR:
gacu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
117540876 (copa)
Exosome [BR:
gacu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117540876 (copa)
Exosomal proteins of bladder cancer cells
117540876 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
117540876
NCBI-ProteinID:
XP_034063696
UniProt:
A0A6P8TI65
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHDYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETD
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKVLDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKESFDP
EKETVPEVDPNAQLLQPSPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMAADADMEAP
GGEGWGDDAELQLDEDGFMDAQDGLGEEGVKEEGGGWEVEEDLDLPPELDLPAAGGGAED
GFFVPPTKGMSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVVSFEAYKPLFMQTLS
RGRTCHLGLPSLPCLRGNPQRNWKDCGAKQGLPAVGLRLSDLIARLQQCYQLTTSGRFEE
AVERFRAILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMETERKKLPKDTLDQQKRL
CEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAASFARRLLELGPKPDVAQQTRKI
LAACEKTLTDAHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPPYKGQICRVT
QVTEIGKDVIGLRVSPLQFR
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgttaaccaaattcgagacgaagtcggcccgtgtcaaaggcctgagtttccatcctaag
aggccatgggttcttgcaagtttgcacaacggagtcatccagctgtgggattatcggatg
tgcacactgattgacaagtttgacgagcatgatggccccgtcagaggaattgacttccac
aaacagcagcctctgtttgtgtctggaggagatgactacaaaattaaggtgtggaactac
aagctgagacgctgcctcttcactctccttgggcacctggactacatcagaaccactttc
ttccaccatgactacccctggattctgagcgcctcagacgaccagaccattcgcatctgg
aactggcagtccaggacctgcgtctgtgtgctgaccggccataaccactatgtgatgtgc
gcccagttccacccctctgaggacctggtggtgtctgccagtctggatcagaccgtgcga
gtgtgggatatttccggtctgaggaagaagaacctgtctcccggcgctgtggagacggac
gtgcgcggcatctctggtgtcgacttgttcggtgcctcggatgctgttgtcaagcatgtt
ctagagggtcacgaccgtggggtcaactgggctgccttccaccccaccatgcccctcatc
gtgtctggagctgacgacaggcaggtcaagatctggaggatgaatgaatccaaggcctgg
gagctggatacgtgccgcggtcactacaacaacgtgtcctgcgccgtcttccacccgcgc
caggagctcatcctgtccaactccgaggacaagagcatccgggtgtgggacatgtccaag
aggaccggggtgcagaccttccgtcgggaccacgaccgcttctgggtgctgggggctcac
cccaacctcaacctgttcgctgctggtcatgacagcggtatgatcgtgttcaagctggag
cgcgagcgtccggcgtacgctgtgcacggcaacatgctgtactacgtgaaggaccgcttc
ctccgccagctggacttcaacagcagcaaggacactgctgtcatgcagctccgcagtggc
tctaagttcccggtgttcagcatgtcctacaaccccgctgagaacgctgtcctgctctgc
actagggcgaccaacctggagaacagcacctacgacctctactccattcccaaagagagc
gactctcagaaccccgatgcaccggaggggaagaggtcctctggtctgactgcagtctgg
gtggccaggaacagatttgccgtcctggaccgtatgcactcgctgctgatcaagaacctg
aagaatgagatcgtaaagaaagttcaggtgccgagctgcgaggagatcttctacgccggc
accggctctctgctgctgcgcgatgccgacggcgtcacgctgttcgacgtgcagcagaaa
cgctctctggccaccgttaagatcgccaaggtcaagtacgtggtgtggagcgctgacacc
agccacgtggctctgctggctaaacacgccatcatgatctgcaaccgtaagctggagagt
ctgtgcaacattcacgagaacatccgagtgaagagtggagcctgggacgagagcggagtc
ttcatctacaccacctccaaccacatcaaatacgcactcacctctggtgatcatggcatc
atccggaccctggatctgcccatctatgtgacccgtgtgagaggaaacagtgtttactgc
ctggacagggagtgcaggccgcgcgtccttaccatcgaccccacagagtaccgcttcaaa
ctggccttggtcaaccgcaaatatgatgaggtgctccacatggtgcgtaacgccaagctg
gtgggtcagtccatcatcgcctacctgcagaagaagggctaccctgaggtggcgctgcac
tttgtcaaagatgagaagacgcgcttcagcctggctctggagtgtggaaacatcgaggtg
gctctggaggcagcgaaggtcctggatgagcgcagctgctgggagcgtctgggggaagcg
gcgctgctgcagggtcaccaccaggtcgtggagatgtgctaccagaggaccaagaacttc
gacaagctcaccttcctctatctcatcaccggaaacctggccaagctgcgcaagatgatg
aagatcgctgagatcaggaaggacatgagcggtcactaccaggcggcgctctacctgggt
gatgtgagtgagagggtccgcatcctgaagaactgtggacagaagtctctggcttacctg
accgctgccactcacggcctggatgaagaggcggaggcgctgaaggagtcctttgaccca
gaaaaggagacggtgccagaggttgatcctaatgctcagctgctgcagccgtctccaccc
atcaaccctctggacaccaactggcctctgctcactgtttctaagggcttctttgaggga
gccattgcagctaaggggaaggcaggtcagatggcggctgatgcggacatggaggccccc
gggggcgaaggctggggagacgatgctgagcttcagctggatgaagatggcttcatggat
gcccaggatggcttaggagaggaaggcgtgaaagaggagggaggaggctgggaggtggag
gaagacctggaccttcctccagagctggacctgccggctgcaggtggaggagcagaagac
ggattcttcgtcccaccgaccaagggcatgagtcccacacagatctggtgcaacaactcc
cagctgccagtggaccacatcttggccggctcgttcgaaactgctatgagattgctccac
gaccaggtaggagttgtgagcttcgaggcctacaagccgctgttcatgcagacgctgtcc
cgaggccgcacctgtcacctggggctgccttcactgccctgcctgcgtggaaacccccag
aggaactggaaggactgtggggcaaagcaaggcctccctgctgtgggcctgcgcctctcc
gacctcatcgcccgcctgcagcagtgctaccagctgaccacctcggggcgctttgaggag
gctgtggagcgcttcagagccatcctgctgtccgttcctctgctggtggttgataacaag
caggagatcgcagaggctcagcaactgatcacaatctgcagagagtacatcgtgggtctg
accatggagaccgagaggaagaagttgcccaaagacaccttggatcagcagaagaggctg
tgtgagatggctgcttatttcacccactgtaatctccagccagtgcacatggtgctggtg
ttgcgcacagctctgaatctcttcttcaagctgcgtaacttcaagacggctgccagcttc
gctcgacgcctgctcgagctggggccgaagccagatgttgcacagcagacccgcaagatt
ttggcagcctgtgagaagaccctcacagatgcgcaccagttgaactacgacccccacaat
ccattcgacctgtgcgctgcgtcgttcgtcccgctgtaccgtggacgtcctgttgagaag
tgccctctgtctggagcctgctactgccccccgtacaaaggccagatctgcagggtcact
caggtgactgagatcggtaaggatgtgatcggtctgcgtgtgagtcctcttcagtttcgt
tga
DBGET
integrated database retrieval system
