Gymnodraco acuticeps: 117541908
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Entry
117541908 CDS
T09661
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gacu04515
]
117541908 (clstn1)
Cell adhesion molecules [BR:
gacu04515
]
Cadherins
Cadherin related
117541908 (clstn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
PFF1_TM
DUF7502
FAM176
Motif
Other DBs
NCBI-GeneID:
117541908
NCBI-ProteinID:
XP_034065102
UniProt:
A0A6P8UFR0
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MRVRGNTPFASAVGLVLGLLCAVEAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTLTEEGEICGFRIHGQNVPFEAVVLDKSTGEGVLRAKDKLDCELQKE
HTFTIQAYDCGEGPDGTNMKKSHKATVHIQVNDINEYAPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICNYEIVTPDVPFTVDKDGFIKNTEKLSYGKERMYKLTVTAYDCG
KNRASEDVLVKISVKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCDEPITSIRANI
ELETNHIGKGCDRDTYSEKSLHKLCGASTGTVELLPAPSSAANWTVGLPTDNGHDSDQVF
EFNGTQAIKVPEGMVSTSLKKPFTISVWMRHGPGAHEKETILCNSDKTEMNRHHYSLYVH
NCRLIMLLRQDPSEAENYKPAEFHWKLDQACDKEWHHYVLNIEFPTVSLFVDGTTFEPFL
VTEDYPLHSSKIESQLTIGACWQDNSGHDNDTESVSEPTSGGNAKMAQFFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEIASAVKVEFNPNQSSLTVEGDDIDAFDKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCFNEESCVSVPDAEGYVMVLQPEEPKISLSGIDHFAR
SAAEFESQEGVTLFPELRIVSTITREVEADAESEAAEGTDDDPTVQETVVSEEIMHNLDT
CEVSVVGDELDGEHEGLEVDMSQLQQHSLEMSSSNLGLVITGVNTMANYEQVLHLIRYKN
WHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTANPVEQANNAMVQPNFINPVHHAS
LDLSGHNLVNAHQASVVPSAATIVIVVCVSFLVFMIILGVFRVRAAHQGTMRDQESGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEESEDGEEEDDITSAESESSEDEEGAEP
EDQQAASRQQQLEWDDSTLTY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtccgagggaatacaccatttgcatccgctgtcggactggtcctcggactatta
tgtgcggtggaggcagctaaagtcaataaacacaaaccatggatcgagacgacgtaccat
gggatcgtaacggaaaacgatgataaagtactgctggaccctcctctaattgcactggac
aaggatgctcctctacgctacgcagagagttttgaggtgactctcactgaagaaggtgag
atttgcggcttcaggattcatgggcagaatgtcccctttgaggcagtggtcctggacaag
tccactggcgaaggggtcctccgggccaaggacaagctggactgtgagctgcagaaggag
cacaccttcaccatccaagcctacgactgtggagagggtcccgatggcaccaatatgaag
aaatcccacaaggccaccgtccacatccaggtaaacgacatcaacgagtatgcaccggtg
ttcaaggagaagtcctacaaagccaccgttatcgagggaaagaagtacgacagcatcctg
aaggtggaggcagtggacgccgactgctctttccagttcagtcaaatctgcaactacgag
atcgtcacccctgatgtgcccttcaccgtcgacaaagatggttttatcaagaacacagag
aaactgagctacggcaaggagcgcatgtacaagctgactgtgaccgcctacgattgtgga
aagaaccgtgcctccgaggatgttctggtcaagatcagcgtcaagcccacctgcaaaccc
agctggcaaggcttcaataagaggattgaatatgagcctggcacaggcagcctggccctt
ttccccagcatgcacttggagacctgtgatgagccaatcacgtccatccgagccaacatt
gaactggaaaccaaccatattggaaagggctgtgaccgtgatacctactctgagaagtca
ctgcacaagctgtgcggagccagcaccggcaccgtggagcttctgcctgcacccagcagc
gccgccaactggaccgtcggcctgcccacagacaacgggcacgacagcgaccaggtgttt
gagtttaacggcactcaggccatcaaggttcccgaaggcatggtgagcaccagcctgaag
aagcccttcaccatctctgtgtggatgagacacggccccggggcccacgagaaggagact
atcctctgcaactctgacaagacagagatgaacagacaccactactcgctgtacgtccac
aactgcaggctcatcatgctcctccgccaggacccatcagaggccgagaactacaaacca
gccgagttccactggaagctcgaccaggcttgtgacaaagagtggcatcactatgtgctg
aatatcgagttccccactgtgtctctgtttgtggacgggaccaccttcgagcccttcctg
gtcacagaggactacccactgcactcctccaagatcgaatcccagctcaccatcggtgcc
tgctggcaagacaactcaggacatgacaatgacactgagtcagtctctgagcccacctca
ggtggaaatgctaagatggctcagttcttccggggcaacctagctgggctgatgatccgc
tctggcaagctggagaacaagaaggtgatcgactgtttgtacacctgcaaggaaggactg
gacgtgcagctgcctgaggagatagcttcagctgtcaaggttgagtttaaccccaaccag
tcctctctgaccgtggagggagacgacatcgatgcctttgacaaggtcatgcagcacatc
tcctacctgaactctcgccagtttcccacacctggtatcaggcaccttcgcatctccacc
accgtcaaatgcttcaacgaggagtcctgcgtatcagtgccagatgctgaaggttatgtg
atggtgctgcagcccgaggagccaaagatcagcctgagcgggatcgatcactttgcccgc
agcgccgcagaattcgagagccaggaaggtgtgacgctgttccccgagctacgcatcgtg
agcaccatcacccgcgaggtggaggctgatgctgaatctgaagcagcagagggaactgat
gatgaccctacagtccaagagaccgtggtgtcagaggagatcatgcacaacctggacacc
tgtgaagtgagcgtggtgggagacgagctggacggggagcacgagggtctggaggtggac
atgtctcagctgcagcagcacagcctggagatgagctcctctaacctgggcctcgtcatc
accggtgtgaacaccatggcaaactacgagcaggtcctgcatctcatccgttacaagaac
tggcacacagaggctctctttgacaggaaattcaaactggtctgctctgaactcaacggc
cgctacatcagcaacgacttcaaggttgaggttaatgtaatccacacagctaatcctgtg
gagcaggccaacaacgccatggtgcagcccaacttcatcaaccctgtgcatcacgcctct
ctggatctgtccgggcacaacctggtcaacgctcaccaggcctcagtcgttcccagcgca
gccaccattgtcatcgtggtgtgcgttagcttcctggtgtttatgatcatcctgggtgtg
ttccgcgtccgagccgcacaccagggcaccatgagggaccaggagagcggcaaggagaac
gagatggactgggacgactcagccctcaccatcaccgtcaaccccatggagacttacgag
gaccagcacagcagcgaggaggaggaggaagaggaggaggagagcgaggacggagaggag
gaagatgacatcacgagtgctgagtcagagagcagcgaagacgaggagggggcagagccg
gaggaccagcaggcggccagcagacagcagcagctggagtgggacgactccaccctcacc
tactaa
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