Gymnodraco acuticeps: 117542021
Help
Entry
117542021 CDS
T09661
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu00310
Lysine degradation
gacu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117542021 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gacu03000
]
117542021 (prdm2a)
03036 Chromosome and associated proteins [BR:
gacu03036
]
117542021 (prdm2a)
Enzymes [BR:
gacu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
117542021 (prdm2a)
Transcription factors [BR:
gacu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117542021 (prdm2a)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117542021 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2HE
zf-C2H2_11
zf-C2H2_8
zf-C2H2_3rep
zf-C2H2_6
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
117542021
NCBI-ProteinID:
XP_034065338
UniProt:
A0A6P8TMN9
LinkDB
All DBs
Position
Unknown
AA seq
1358 aa
AA seq
DB search
MEDSPHLYISEFIENEDMDKMDINQEETNIASDMVKSPYQDTERDSNSFQCQHCERHFTT
KPGLERHMHIHTSANNDAHKYKTNISLASNLEQLHHEKVKPLDLAGSAMQLHTSSTTGSN
TPILSSGDHNAQPDKPGVSEGRHACKYCEKIFTTHTNTRRHERRIHEQHLQVTHVEKAHL
PQEENVEGMCSETNQQETELVDKMAPAAVLENEVGHAEQYMLDISSNISENLSFYIDGRI
VSTSTISSCEAAEVHSGSATLVGLDALILDPTQISQVLNTDSEMSGQPLARRRTATPPLL
PQIKTELESDVVVSSSSSSLVCSIIENLFPQNTEGTVVQKERTVFLSPKLKQLLEKQDGL
KLALIADGQKPLSPVSLSVLPAGTGRFKRRTGSPPPSSPQQSPREETADSGDCEAVNTGQ
TETQYSSPAHKTANVKDDTTPPEEEPQTESWPPSTGGNSCNQQPLDLSNTVKSSEDVASA
DSALDLSFQKTNHGESELMLNFVSHAVLTEGKSIEGMMGMTLIDSLEQNISFMNPDTSLL
TDFTILTSQDMMSPMQSMAEGLVYGLALPSNSLTPSPSLTPLSLQPSSPCTIAFTTHASH
TGLSTAPSLITVLAPSHISNQPIQVLAPDISQVTCTENALHFSECDLTTAFATSNAADPV
TLSQPFHPTLNLPSHMFLSDQITLNPPILESTPTSEGQFTPTVTFNDSLINSYNLTSNTV
LIECTIALEAPGSIVPAAVTLQGNTAEPPAPTQMVVNHVEQEQIVSVPNPQTEDYSILMS
SIAESVTLSTTAASVLSDCPAPVGESGPDPELVVNAEPSTIKEEEAADGTVSAPETPSKT
SPSSEKAEEEDASTTPSDAQQQTFTKNFICNVCDKLFHSMKELGHHVGDHADEWPYKCEF
CVLLFSKPSALLDHRSSLHGVGKTYVCSACTKEFVYLCNLKQHQEELHPGQQCTYTEEEK
GKLRPQNFNNLTKVTTETSVPDAAEELKVKKEEGEVDEAAEELLTTIKILASDGAKLKGP
DVRLGINQHYPSYKPPPFPYHNRSTTGTLASATNFTTHNIPQTFSTAIRCTKCGKSFDNM
PELHKHILTCANASDKRRYTPKRNPIPLRHFAKTQNGVLSTTNSTNGLNASNRPSHSNRS
KPNQDSAVNVKFKVMSKRKKKLVQRVMPQRNKSVPSSNKMSPAHVDEQQEIFVCPHCSRE
FTMRRSRTKHMAVCPKKPKEVKKRKEGGISVTKENDGHLHRGAEETQQSSPLHKTRLQTS
SPAKRPAILPVQTVLSNKRSKIIIKESTQLKQDTPTLSELPIVRTFNPSMRQYSRMQHKG
MPIKITIVKPQQAAAQREERPPTPGPEDSSSSEHSPAV
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggaggactctcctcacctatacatctcagaatttatagagaatgaggacatggataag
atggacattaatcaagaggaaaccaatattgcatccgacatggttaagtcaccataccag
gacactgagagggactcaaactcttttcaatgccagcactgtgagagacacttcaccacc
aaaccaggcctggaacgacacatgcacatccacacctccgcaaacaacgatgctcacaaa
tataaaaccaatatttcactagcttcgaatctggagcagttgcaccatgagaaggtaaag
cctctggatttagcaggctcggccatgcagcttcatacttcatccaccactggctctaat
actcccattttgtcctctggtgaccacaacgctcagccagacaaaccgggagtgtcagag
gggcgtcatgcttgcaagtactgtgaaaagatattcactacacataccaacacgcgacgg
catgagcgaaggatccacgagcagcacctgcaagtcacacatgtggaaaaagcccatctg
ccccaagaggaaaacgttgaggggatgtgcagtgaaacaaaccaacaggaaacagagctt
gttgacaaaatggcacctgcagctgttctggagaacgaagtgggacacgcagaacaatac
atgcttgacatttctagcaatatttcagagaatcttagcttttatattgatggaaggata
gtgtcaacaagtacgatcagtagctgtgaagcagctgaggttcattctgggtctgcaact
ttagttggactggacgccctgattctagaccccacccaaatcagccaggtgttaaataca
gattcagagatgtctggtcaaccactggccaggagaagaaccgccacacctccgctttta
ccacaaattaaaactgaactggagtctgacgtggttgtgtcttcttcctcatcttcactt
gtatgttctataatagagaatctttttcctcagaatacagagggtacagtggtgcagaag
gaaagaactgtgtttctgtctccaaagctgaagcagctgctggagaagcaggatggcctt
aaactcgcactcatcgcagacggccagaagcctttatcacccgtctctctgtctgtgctg
cctgcagggacaggacggttcaaaagaaggactgggtctcctccaccgagctctccacag
caaagccctagagaagaaacggcagatagtggagattgtgaagctgtgaatacaggacag
acggagacccaatatagttcacctgcgcacaaaacagccaatgtgaaggatgacacaacc
ccacctgaggaggagccacagacggagagttggcctccctccaccggcggtaattcctgt
aaccagcaaccactggatctctccaacacagtcaaaagcagtgaagacgtagcttcagcc
gattcggcgctggatttgagtttccaaaaaacaaatcatggggaatctgaactgatgtta
aattttgtttcacatgcagttttaacagaaggaaaatcaattgaaggcatgatgggaatg
accttaatcgatagtttagagcaaaatataagcttcatgaatcccgacacctccttactg
acagacttcaccatacttacaagtcaagatatgatgagcccaatgcagtctatggcagaa
gggcttgtttatggtcttgcacttccctccaattccctgactccatcaccctccctaacc
ccgctctccttgcagccatcttcaccgtgcaccatagcattcaccacccatgcttcacac
acggggctctccactgctccttcattaatcacagtgttggcaccgtcacatatttcaaac
caaccaatccaggtattagcccccgatatatcacaggtaacctgcacggaaaatgcatta
catttttcagagtgtgatttaactactgcatttgccacttcaaatgctgccgaccctgtc
actctctcccaaccttttcacccgactctaaatctacctagccacatgtttctctctgat
caaataacactcaatccgcctatattggagtccactcctacgtcagaagggcaattcaca
cccactgtaactttcaatgattccctcatcaactcgtataacctaaccagcaacacggtg
ttgatagagtgcacaatagctcttgaagccccggggagtatagtccctgctgcagtcacc
ttacaaggaaacactgctgagcctccagcacctacacagatggttgttaatcacgtcgaa
caggagcagattgtatcagtgcccaacccgcaaactgaagactattctattctgatgtca
tccatcgcagaatcagttactctatccaccactgccgcctcagtgctatctgattgtcct
gcgccagttggtgaatcaggtcctgacccagagcttgttgttaacgcggagccatcgacc
atcaaagaggaagaagctgctgacggcactgtttccgcccctgaaaccccatctaaaacc
tcgccttcttctgagaaagccgaagaggaggacgcctcaacaactcccagcgatgcccaa
cagcagactttcaccaagaatttcatctgcaacgtgtgcgataagcttttccattcaatg
aaagaactgggccatcatgtaggtgaccacgctgatgaatggccctacaaatgtgagttc
tgcgtgctgctgttcagcaaaccctccgctttgctcgatcatcggtcaagcctccacggg
gtgggcaagacttatgtttgcagtgcatgcacgaaggaatttgtctacctttgcaatcta
aaacagcatcaggaagaattacatcccggacagcagtgtacatacacagaagaggaaaag
ggaaaactaagacctcagaacttcaataacttaacaaaagtcaccacggagacctcagtg
cccgacgctgcagaggaactgaaggtgaaaaaggaagaaggggaagtagatgaggctgct
gaagaactgttaacaactataaaaatcctggcctcagatggagccaaactcaaagggccg
gatgttcgtcttggcatcaaccaacattaccccagctataagccccctccgtttccctac
cataacaggtccaccacgggcaccttagcttcagccacaaacttcaccacccacaacatc
ccacaaaccttcagcacggccattcgatgcaccaagtgtgggaagagctttgataacatg
ccagagttacataagcacatcctgacttgtgcgaatgccagcgataaaaggcgatacacc
cccaaaaggaatcccatcccactacgccactttgcaaaaactcaaaatggagttctatct
accactaactccactaacggactaaatgcgtcgaacagacccagccattcaaacaggtcc
aaacctaaccaagattcagcagtaaatgtgaagttcaaggtcatgagcaagaggaagaaa
aagttggtccaaagggtcatgccacagaggaacaagtcagtcccttcatcgaataaaatg
tcacccgcacatgtggatgagcagcaggagatcttcgtctgcccgcactgcagcagggag
ttcacaatgcgccgcagcagaaccaaacacatggccgtctgccccaagaaacccaaagag
gtgaagaaaaggaaagaaggaggcatctctgtgacgaaggagaatgatggacacctgcac
agaggagctgaagagacacaacaatcctcacctctgcataaaaccagactgcagacttct
agccccgctaaaagacccgccatcctaccagtgcaaaccgtcctgtcaaacaaaagaagt
aaaataattatcaaagagagcacacagctgaaacaagacacgcccactctgagtgaactt
cccatcgttcgcacttttaacccctctatgcgacagtatagccgaatgcagcacaaaggg
atgcccattaagatcaccatagtgaaaccacagcaggctgcagcgcagagggaggagcgg
ccccccaccccgggcccagaggacagcagcagctctgagcacagtccagcagtctga
DBGET
integrated database retrieval system
