Gymnodraco acuticeps: 117542056
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Entry
117542056 CDS
T09661
Symbol
prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu00310
Lysine degradation
gacu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117542056 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gacu03000
]
117542056 (prdm16)
03036 Chromosome and associated proteins [BR:
gacu03036
]
117542056 (prdm16)
Enzymes [BR:
gacu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
117542056 (prdm16)
Transcription factors [BR:
gacu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117542056 (prdm16)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117542056 (prdm16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_11
zf-H2C2_5
SET
zf-BED
C2CH-4th_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
117542056
NCBI-ProteinID:
XP_034065409
UniProt:
A0A6P8TMM8
LinkDB
All DBs
Position
Unknown
AA seq
1416 aa
AA seq
DB search
MRSKARARKLAKNDSEPVDSMYDTEADLPGLAAIGGADSPEDDAEDGVINMSPLPSPTPS
HPNNNHHHLLHPHIYASHHHHHHHIHNNSNSSSNDQDFTTPKEGSPYEAPVYIPDDIPIP
GDLELRESSVPGAGLGVWAKTGIGAGERFGLHSTLHHDTTGKDGSFGWEMMNDHDEASPD
SCIKKVVDDMGHVKFALDTGPDTPGNSWLKYVRSAPSFEEQNLAACHLTGDQMYYKAVRD
IEAGEELLVYMKDGIFPEGSMAPNLQDEQMYRCEDCDELFSSTLELRRHQKYSCTSSGSI
FDTLREDFKQEREDSDEPIHECKDCEKIFPNEYSLGQHMIVHTEEREYKCDQCPKAFNWK
SNLIRHQMSHDSGKRFECENCDKVQHTRHVFTDPSNLQRHIRSQHVGARAHTCPECGKTF
ATSSGLKQHKHIHSSVKPFICPDGLPPFVPPGEVCHKSYTQFSNLCRHKRMHADCRTQIK
CKDCGQLFSTTSSLNKHRRFCEGKNHYGSPAGMFNPGIPMSSSPIMAKIKSHHPHLAGLN
QSGLGFTDYFPSRPHPHAGMPFSPGPHGFPSLPHGFPGIFSQSLYPRPPLLPASSLLKSP
MGGGSQEVKLPRSPLDAPPLSMVSSTNSNGGNCLSQLEDKEKENKLDLSSAEAKTKSKLA
DMSDGSDLEDVNTTSGTDLDTTTGTASGDGSDLESDGESERERSGKRRKQSEAISSQEGH
QLEDMNSALISAMSSSGNFAIDRPFLSSASHHSFFPPPDEQALPPTHTNANAVTTDSIKA
IASIAEKYFGPGLIGLHQEKKMGPLPYHSMFPFQFLPNFHNSLYPFSADRGALNPNMFFK
AEPKSPREQLHKMASGAPGVPASSGESAFDLTTKPKETKLAPPTPTHPSNPNSSTGSSGP
SAKSSGEEQPLDLSIGGRSRGGHNGVAAEPHHRKNHLYGVGKGVSVKDENPSGFPHPHSH
SLHQSSIAQHQQHHPQPHQPPPLHYAKPSAFFMDPIYSWSSRVEKRKLLDPVGALKEKFL
RPSAPLFHPQMSAMENMTEKLESFGALKLDMPHNSLQHAHPLFNFRSPPPSLSDAILRKG
KERYSCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKP
FKCHLCNRCFGQQTNLDRHLKKHEHENIPVSQQSGMLSNLGTTISSPNSEPENHALLDEK
EDSYFSEIRNFISNSEMNQASSSTEKRSDQAEEERPPSHSLSNSKLGLQGLEEEDEEVEG
DDEEEEEGSLTEKSHDEAPESPSPVTTGVYEEDEEEEETEAAPLAMSYEHTRRCIDEGSL
LDLEGLPSFPKSLEGLRKAASDEQPFDVKDIFNTSLESEALKETLYRQAKTQAYAMMLSL
SENNPLHAPSQNSLDAWLSLGGGPSETSSFHPLNHI
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactggccaaaaatgacagtgagccggtggacagc
atgtacgacacagaggccgacctcccgggtttagcggccatagggggtgccgacagccca
gaagatgacgcagaagatggcgtcatcaacatgtcccccctgccctcacccactccttca
catccaaacaacaaccaccaccacctgctgcacccccacatctacgccagccaccaccac
caccaccaccacattcacaacaacagcaacagcagcagcaatgaccaggacttcaccaca
cccaaggagggctcgccgtacgaggcgcctgtctacattcctgatgacattcccattccc
ggcgacttggagctgcgggagtcctctgtgcccggagccggcctgggcgtttgggccaag
accggcatcggtgctggggagaggttcggtctgcacagcacgctgcatcacgacaccacg
ggcaaagacggctccttcggatgggagatgatgaatgaccatgatgaagcctcccctgac
agctgcatcaaaaaggtggtcgacgacatgggccacgtgaagtttgcgctggacacaggc
ccggacacccccggcaacagctggctcaaatatgtccgctctgccccgtcatttgaggag
cagaacctcgccgcctgtcacctcactggagaccagatgtattataaagctgttcgggac
attgaagcaggggaggagctcttagtgtatatgaaggacggtattttccccgagggatcc
atggcacccaacctacaagacgagcagatgtaccggtgtgaagactgtgatgagctgttc
tcctcaacacttgagctgcggcggcaccagaagtattcatgcaccagtagcggctccatc
tttgacacactgagagaggacttcaaacaggagcgcgaggacagcgacgagcctatccac
gagtgtaaagactgtgagaagatcttcccgaatgagtacagtctgggccaacacatgata
gtccacacagaggagagggagtacaaatgtgaccagtgccccaaagccttcaactggaag
tccaacctcatccgtcaccagatgtcacatgacagtggcaagcgttttgagtgtgaaaac
tgtgataaggtacagcatacccggcacgtgttcacagatcctagcaaccttcagcgtcat
atccgctcccagcacgtgggggcacgcgctcacacatgtcctgagtgtggcaagaccttt
gctacttcgtcaggcctcaagcagcataagcacatccacagcagtgtcaaaccctttatc
tgccctgatgggctgcctccttttgttcccccaggcgaggtgtgccacaaatcctacacc
cagttctccaatctctgccgccacaagcgcatgcatgctgactgccgcacccagatcaaa
tgcaaggactgtggacagttgttcagcactacctcctccctcaacaagcatcgtcgcttc
tgtgagggcaagaaccattatggctctccagcagggatgttcaaccctggcatccccatg
agctccagtcccatcatggctaagatcaagtcccaccacccccaccttgcaggtctaaac
cagtcaggtttaggcttcactgactactttccctcccgacctcaccctcacgctggcatg
cccttctctcctggaccccatggcttcccatccctccctcatggtttcccaggtatcttc
tcccaatcactctatccgcgaccacctttattgccggctagttcgttgctaaagagcccg
atgggcggtggcagtcaggaagtgaaacttcctcgaagtcccctagatgcccctccactg
tccatggttagctccacaaacagcaatggaggaaactgtttgagtcagctggaagacaaa
gaaaaagagaacaaactggatttgtcttctgcagaagccaagacaaaatctaagcttgca
gacatgtctgatgggagtgacctcgaagacgttaataccacaagtgggacagatttggac
accaccactggtacggcttcaggtgatggttctgacctggagagtgatggagagagtgaa
cgtgagcgaagtggtaaaagaaggaagcagtctgaagccatatcaagtcaggaaggccac
cagttagaagacatgaacagtgcgttgatatcagccatgtctagctctggtaacttcgct
attgatcgtccctttctttcatctgcatcccatcactccttcttccctccacctgatgag
caagccctcccgcccacccacacaaatgccaatgcagtcaccacagattccatcaaagcc
atcgcctctattgctgagaaatattttggtccaggtttgattggtctccatcaggagaag
aaaatgggtccattgccctaccattctatgtttcccttccagtttctacccaactttcac
aactccctctatcccttcagtgctgatcgaggtgccctcaatcctaacatgttctttaag
gcagagcccaagtcacctcgcgagcagctgcacaagatggcttctggtgccccaggagtt
cctgcttcatcaggagagtccgcatttgatctcaccacaaagcccaaggagactaagtta
gctcctcccaccccaacacacccctcaaaccccaacagtagtactgggagcagcggacct
tctgccaaatctagtggtgaagaacagccattggacctcagcattggcggccggagccga
ggtggacataatggtgtggcagctgagccacatcatagaaagaaccacctatacggagtt
ggaaagggggtctccgtcaaggacgaaaacccatctgggtttccacacccccattcccat
tcgttgcaccaatcctccatcgcccagcaccagcagcaccatccccagccacaccagcct
ccacccctgcactatgccaagccctccgcattcttcatggaccccatatacagttggtcc
agcagggtggaaaagaggaagctactcgaccccgtgggagctctgaaggaaaaattcctc
aggccctcagcaccactcttccatccacagatgtcagccatggagaacatgacagagaag
ctggagagctttggtgctctgaagctggacatgccacacaattcgcttcaacacgctcat
ccactgttcaatttccgctcccctccaccttccctctcagacgccatcctccgcaaaggc
aaagagcgttactcctgcaggtactgtgggaaaatctttcctcgttcggcaaacctcaca
agacacttgcggacacacacaggggaacaaccctacaggtgtaaatactgtgaccgctca
ttcagcatctcatccaatcttcaacgccacgtccgcaacatccataacaaggagaaaccc
ttcaagtgtcacctgtgcaaccgctgctttggtcagcaaaccaacctcgaccgccatctc
aagaagcacgagcatgagaacattcctgtgagccaacagtccgggatgctttccaacctg
ggaaccaccatctcctctccaaactccgagccagaaaatcatgcacttttagatgaaaag
gaggactcatacttctcagaaatccgcaacttcatttccaacagtgagatgaaccaggcc
tcaagctccacagaaaagagatcagaccaagccgaggaggaacgcccacccagccacagt
ttgtccaactccaagctagggctccaggggctggaggaggaggacgaggaagtggagggc
gatgatgaggaagaggaggaaggcagcctgacagagaagtctcacgacgaagcgcctgag
tccccatctcctgtcacaacaggagtgtatgaggaagacgaggaggaggaagagacggag
gcagctccgttagctatgagctatgaacacactcgcaggtgtatagacgagggctctctc
ttggacctcgagggtctccccagctttcccaagagcctggaggggttacgtaaagcagcc
agtgacgagcaaccctttgatgttaaagacatatttaacacttcactagagtcggaggca
ttgaaagagacattgtacaggcaggctaaaacccaggcttatgcaatgatgctgtccctc
tcggagaacaaccctttgcacgcgccctcccagaactctctggatgcttggctgagcttg
ggaggtggaccgtctgagacgagcagctttcacccgctcaaccacatatag
DBGET
integrated database retrieval system
