Gymnodraco acuticeps: 117542087
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Entry
117542087 CDS
T09661
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117542087 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gacu03400
]
117542087 (xpc)
DNA repair and recombination proteins [BR:
gacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117542087 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
117542087
NCBI-ProteinID:
XP_034065461
UniProt:
A0A6P8TMT1
LinkDB
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Position
Unknown
AA seq
915 aa
AA seq
DB search
MAKRRGGAAETEAGTKKLKQVLKKGCGAKARGKKKDAGISIKQEEDEIKRKVQPKPRSST
KRGAEKKNSNTSKTTTAVKTSKYFQSPVKEEADSEDDCNMVTSAAPAITMKIMKTEEEEE
GSEEDEDDWEEVEELSGPLGPPGPSEPVLPTQPVEIEIEIETSEVRKKKKRQAEFETYLR
RVMNKIKKDVLIDTHKVHLMCLIAGGMFHSSLCSEPDLLAITLSLLPTHYSMVAKERIDQ
NYLSGLLKWFRATFTLNPSLSCEERPDPRALLERRLASLSGRDHQEMTHMFLLVLRSLQL
FCRLVISLQPIPLKAPSAKGKGAKTSLGAPGKGDTSQDTSKNSSPESKVSPGTKRGGNIK
GGRGGKKAKTIAIKEEDEKTITSGGQRPKNSKRRSIASKVTYKEESNSDEEKKEGGLSDE
DEFQATSEEGSEESEGGSKSKKGTKGKGKSKNTAAPKRRSSGGGEKEEGNEREVDDKKEE
GITSIRKKQRSGNKAKGPGADEWLEVFLEKTSSWVCVHVEQGVGLPHLCSQNATTPVTYV
VAVDGHGFVKDLGRKYDPTWLTTSRKRRVDEDWWDETLGPFLGPEDERDKKEEKELQSRL
MNKPLPVSIAEYKNHPLYALKRHLLKYDAIYPATAAVLGYCRGEPVYSRDCVHSLHSKDT
WLKEARTVRLGEEPFKMVKGFSNRSRKARMASGQTEEKDLAVFGEWQTEEYQPPLAVDGK
VPRNEYGNVYLFKPCMLPVGSVHLRLPNLNRVARKLEMDAAPAVTGFDFHGGYSHAVTDG
YIVCEEHEEILRAAWAEEQEIQKQKEKEKKEKRVISNWILLVKGLQIKEKLKQRYGKLNQ
GLLQGEEAAGLSSDEEGDEGGSPSDKTASETLAMSWPQNKQAEEDGGSISGLKRTAKTKR
EKKGQEKHMFPFEKV
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcggagagggggtgcagcagagaccgaggccggtacaaagaaactgaagcag
gttctgaagaagggctgcggagccaaagcgagagggaagaagaaagatgcaggtattagc
atcaaacaggaagaggatgagatcaagaggaaggtccaacccaaaccacgttcctccaca
aaacgaggagcagaaaaaaaaaattccaacacgtctaaaacaaccactgctgtcaaaaca
agcaaatacttccagtcgccggtgaaagaggaggctgacagtgaagatgactgtaacatg
gtgacctcagcagcgcctgccattacgatgaaaatcatgaaaacagaggaagaggaggag
ggcagtgaggaagacgaggacgattgggaggaagtggaggagctctccgggccactgggt
ccacctggtccgtcggagcccgtcctgcccactcagccggttgagatagagattgagatt
gagacctcagaggtcaggaaaaagaaaaagaggcaggcggagtttgagacgtatctgagg
cgggtgatgaacaaaatcaagaaggacgtgctgatagatacacacaaggtccacctgatg
tgcctgatagcgggggggatgttccacagcagtctgtgcagtgaacccgacctgctggcc
ataactctgtcgctgctgcccacacactacagcatggtcgccaaggaacgcatcgaccaa
aactacctctctggactgctcaaatggtttagagcaacattcaccctcaaccccagtctt
tcctgtgaggagcgtccagacccccgggctctgctggagagacgtctggccagcctgtcg
ggcagagaccaccaggagatgactcatatgttcctgttggtcctgaggtctctgcagctc
ttctgccgattggttatttctttgcagccgattcctctcaaagccccatcagccaagggt
aaaggggccaaaacatctctaggggccccaggaaagggagacacaagccaggatacatcc
aagaactcctctcctgagtcaaaggtctctcctggcaccaagagaggggggaatatcaag
ggaggccgaggaggaaagaaagcaaagactatagcaataaaggaagaggatgagaagact
ataacatcaggagggcagaggccaaagaactctaaacgccgcagcatcgcctcaaaagtc
acctacaaggaagaaagtaacagcgacgaggaaaaaaaggagggtgggctcagtgatgag
gatgagtttcaggcgaccagtgaggaaggcagtgaggagtcagagggagggtctaaatcc
aaaaaggggacaaaggggaaaggcaagagcaaaaacactgcagctccaaagagaaggagt
agcggagggggggaaaaggaggagggaaatgagcgagaggtagatgacaaaaaagaagaa
ggaattacaagcatcaggaaaaagcaaagaagcgggaacaaggcaaaagggcctggagcg
gacgagtggttggaagtgtttctggagaaaacgtcttcctgggtttgtgtacacgtggag
cagggtgtcgggttgcctcacctctgctcacagaacgcaacaacgccggtgacgtacgtg
gtggcggtggacgggcacggctttgtgaaggacctggggaggaagtacgaccccacctgg
ttaacgacgtccaggaagaggagggtggatgaagattggtgggacgaaacactagggcct
ttcctgggacccgaagatgagagggacaaaaaggaagaaaaggagctccagagcaggcta
atgaacaaacctctgccagtctcaatagcggagtataagaaccacccgctgtacgcccta
aagaggcacctgctgaaatacgatgccatctaccctgcaacagctgctgtcctgggatac
tgcaggggagagcccgtctactccagggattgtgtgcactccctccactccaaggacact
tggctaaaagaagcacggactgtcagactaggagaggagccatttaaaatggtgaaaggc
ttctctaatcgttcccgtaaagccaggatggcgtccgggcagacagaggaaaaggacttg
gctgtgtttggagaatggcagactgaagaataccagccgcctttagctgtggatgggaag
gttccccgcaacgagtacggtaacgtctacctgtttaagccttgtatgttgccggtgggc
agtgttcacctcaggctgcccaacctgaaccgcgtggcgaggaagctggagatggacgcc
gcccccgccgtcacgggcttcgattttcatggaggatactcacacgctgtcactgatggg
tacattgtgtgtgaggagcatgaggagattctcagagcagcctgggcggaggaacaggag
attcagaaacagaaggagaaagagaaaaaagaaaagagggtgatctccaactggattctg
ctggtgaaggggctccagatcaaagaaaaactcaaacagcgctacggaaagttaaaccaa
ggtcttcttcaaggggaggaggccgccgggctttcttcagatgaggagggggatgagggg
ggaagtccttcagataagacggcatctgagactctggccatgtcctggcctcagaacaaa
caggctgaggaggacggggggagcatcagcggactgaagaggactgcgaagacaaaacga
gaaaagaaaggacaagagaaacacatgttcccatttgaaaaagtgtga
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