Gymnodraco acuticeps: 117542293
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Entry
117542293 CDS
T09661
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117542293
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
gacu04091
]
117542293
Lectins [BR:
gacu04091
]
C-Type lectins
Lecticans
117542293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
C8-3_MUC4
Motif
Other DBs
NCBI-GeneID:
117542293
NCBI-ProteinID:
XP_034065753
UniProt:
A0A6P8TNS1
LinkDB
All DBs
Position
Unknown
AA seq
2183 aa
AA seq
DB search
MFLKAFHLSLQVELTLTKEEDVCQRLNGNLSANFSSEYNFSQSTKMAAAVRTLLLLAVTA
ICSGTLVVVNSGVKVTRGRSVFITEMELRINVGPTADCKVEVVMNEPITQRVGKLTPQVF
DCSFLEDEVKYCHNGSPLLDQDTVMLRIYRFTSSDTLVETVVLKVQVADSGSGVVELGGT
PLVVPVFYGLSNSIDGSVLNIRSSADLVCTVRLMSDTSTPALGQLVRNEDSTQRKGRETA
SLCQGNQPCLYDTKEVGFLKTSCQDFLSSGLKYQHLSPPSPEIDYIPIRVELREKGSRAL
LEAESLWLPVLIHGAMQNQPPQAVFMASFILEVDQFILTPLTTASLDAKDPETPQERLVF
NITTPPAEGYVTHLDDHTKPVTSFTWLDLHEMKVAYQPPNSSQSQRRNHEVEFHVIDGSY
ITSPPFMVHISIRVAETNAPRVSWNMGLDLLEGQSRPVTWDELQIVDNDNINAVYLVAVD
GPLHGRLSVRGRKAFMFRVGDLREGVVVYHHSDSDTTHDHIVFRISDGRHSIRHKFPINI
LPKDDSPPFLINNVAVEVQEGGAVRLEQLMLLASDLDSSDDYILYQVTSSPRVGQLLRKT
STQETGVPVESFLQRGLIQGQIYYQHSGEEQFEDSFDFTLSDSHQPPYLSQTYTVVVHVF
PVKDQLPVEVSGSIRSLTVRETEVVHVTQAHLHFTDREHPDTDLSYVITQPCINPLHPGL
MDAGRLFYTDTTNSMKKDHMVPVLKSFTQHAVNHRKVAFMPPVEDIGPDPLFLQFVFSVS
DHHGGTISDLVFNITVIPVDDQAPEAFTNLLRVEEGGGAFVTEEHLLVQDRDSWEEVLRA
EVQRTAGHGRLELQGRTLQQGHTFTLQDLRERRLRYIHDDSETTEDEVHLKVTDGLNSAD
VVLAIQVLQMNDEPPQLGGGLWGELSCQERGRVQVTVDYLSATDRDSENSRLMYMLARRP
GRGELQRDGLSVDKFSQQDLLQGHVYYVHTGGEIGPDPVVDIITLIISDGEAGGTDGCCY
GDAPPPPVPLHGTLPVCDLNITILPVNNEVPSITLGASMLMVDEGSSSCLCGGVLAASDP
DSPPDQLTFHLETPPLHGYLENTQPTPGSEKSNVGVRVESFSLVHLTMGLINYVQSESKG
AEPTIDQLSISVSDGLHRSAPVPFYIIISPTNDETPSLLLANFTVNEGGMRELTPSILNG
FDLDSPLDTLTFTVVQPPAHGSLINGIYSLEKSRYTDTGAELLQRSLPITSFTLQELQQG
MKIVYMHDDTETLQDAVALRLTDGVHTVQGRARVTLLPLNDERPRLLRNAGLEVDAGERR
VISSVALEAEDPDNPPQQLFYSLIAAPRFGKLQIKKESAWSELSAGQNFTQDDVEMNRLW
YAHTAATNAAGFKGHDSFRFTLSDLDNETPAQSFFINVHTVQKGELLLLSRGGALTEGQR
LVLNTNILLAWDSSGHPEELVYTLSPPPRHGLVHGVQQPGVPLASFTQLDIAAHRVCYTH
DNSHHADTDSFSFVVTNGASSRSGTLHFTIEHGDRIPPTLNHNTGLRLQDGSTETISPAQ
MQLTDPDTATSNLSFVITQPPGHGRLLLRGVPLFPPLGFTQTDVDQLNLDYQHQLGSLAD
IDRFYFLPTDGTNIGYLEFGQLREEPAVFNIQVDRVDRLPPSLSTRRIPNTVVGLGGGRY
GIFITSKHLQASDPDSPAEELEFSISRPPQFGYLENTLTGAYIKGCFTQRDVDQRAVAFI
VPADMEVTADSFQFLLTDPAGNTMLPQILELSWSRVELSATCYRTCETVGTLQIYIQRSG
GSADPAYVAIQVEEGSAKPGRDFTHSTAALIQFDPGVSVKTWNIYLIDDGLEENHETFTV
TLKNAKNAVLGQRTSASVEIIDPRGGRCNPDDLMVEEEDERLPTAPPPAQLPDPPRVKEE
DSVTDIEAELLWENQPHPPQGEVPNRRPYLDYREGESKDQAAPHSQRSSPSTGSSGSSVP
RVMHRGLKVQLSGGRRSEEKVWTFHSLTPLRLEELKQGDAGRSWSPDSPPLQDPPQMDHP
EPRHNPELRRHKTGKSVSSWCAEGWTHYRRRCYTVSLSVASWASAERSCSMLFNSSLTGV
NSRRDMTWLWKFAGRKPFWIGLSGGPGRWMWADGQSVSFSRLSGETLLGSDCVLVENPRS
WISTSCSPETQHTFICSSQDRTH
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgaaggcatttcacttgtctttgcaggttgaattgacattaacaaaagaagag
gatgtgtgtcaaagactgaatggaaatctgtcagctaatttttcttcagaatacaacttt
tcacagtcgaccaaaatggctgctgctgtccgcacgctattgctgctggcggtgacagcc
atctgcagcgggactctggtcgtggtgaactcgggcgtgaaggtcaccagaggtcgatca
gtgtttatcacagagatggagctgaggatcaatgttggtccgactgcagactgtaaggtg
gaggtggtgatgaacgaaccaatcactcagagggtggggaagctgactccacaggtgttt
gactgcagctttctagaggacgaggtgaagtactgccacaatggaagtcctctgctggac
caggacacagtgatgctgagaatctacaggttcacgtcctctgacacgctggtggagacc
gtggttctgaaggtgcaggtggcagactctggatctggtgttgtggagctcggtggcact
ccgctggtggttcctgtgttctacggtttatccaactccatcgatggctctgtcttaaac
atccggagctctgcagacttggtgtgcaccgtcaggctaatgagcgacaccagcaccccc
gctctgggtcagctggtgaggaacgaggactccacccagaggaaaggcagagagacagct
tcactctgtcagggaaaccaaccctgtctctatgataccaaggaggttggttttctgaaa
acaagctgtcaggacttcctgagctccggcctgaagtaccagcacctcagccctccgtca
ccagagatcgactacatccccatcagggtggagctgagggagaaggggagcagggctctg
ctggaggcagagtcgttgtggttaccagttctgatccacggtgccatgcagaaccagccg
cctcaagccgtcttcatggcctcattcatcctggaggtggaccaattcatcctcaccccg
ctcaccacggcctctctggatgctaaagatcctgagaccccgcaggagaggctggtcttt
aacataaccaccccccccgccgagggctatgtcacccatctggatgaccatacaaagccg
gtcacgtccttcacctggctggacctacacgagatgaaggttgcataccagccgcccaac
agcagccaatcacaacgcaggaaccacgaggtggaattccatgtaatagacgggtcctac
atcaccagcccgcccttcatggtccatatttccatcagggtggctgaaacaaacgcaccc
agagtctcctggaacatgggtttggacctgctggagggtcagtctcgaccggtcacctgg
gacgagctgcagatagtagacaacgacaacatcaatgcagtgtacctggtggctgttgac
ggaccgctacatggacgccttagtgtcagaggtaggaaggcattcatgtttcgtgtcggg
gatctgagggagggtgtggttgtttaccatcactccgacagtgacaccacccacgaccac
atcgtcttccgcatcagcgacggccgtcacagcatccgccacaagttccccatcaacatt
ctgcccaaagacgactccccgccctttctcataaacaacgtggcagtggaggtgcaggaa
ggtggtgctgtgaggctggagcagttgatgctgttggcctccgacctggactccagcgac
gactacattctgtaccaggtgacctccagccctcgggtggggcagctgcttaggaagacc
tccacccaggagacaggagttccagtggagagtttcctgcagagaggtctgatccagggt
cagatctactaccagcactcaggagaggaacagtttgaggactccttcgacttcacgctg
tctgacagccaccagccgccctacctctcccagacatatacggtggtggtccatgttttc
ccggtgaaggaccagctgccggtggaggtctccggcagcattcgctccctgacggttagg
gagacagaggtggttcatgtcactcaggctcacctccacttcaccgaccgtgagcatcca
gacacagacctgagctacgtcatcacacagccctgcatcaacccactgcatcctgggctg
atggatgcgggacgtctgttctacacagacaccaccaacagcatgaagaaagaccacatg
gtgccggtgttaaagtccttcacacagcacgcagtgaaccacaggaaggtggccttcatg
cctccagtagaggacatcgggccagatccactgtttctccagtttgtcttctccgtcagc
gaccaccatggcggaaccatctccgaccttgtcttcaacatcaccgtcatccctgtggac
gaccaggcgccagaggctttcaccaacctgctgcgggtggaggagggtggaggggccttt
gtgactgaggagcatctcctggttcaggaccgggacagttgggaggaggttctgagggcc
gaggttcagagaacggctggccatggcaggctggagctgcagggccgcacgctgcagcaa
ggacacaccttcaccctgcaggacctgagggagcgcagactcaggtacatacacgatgac
tctgagaccacggaggatgaagtccatctgaaggtgacggacggcctgaactcagctgac
gtcgtcctggccatacaggttctgcagatgaacgatgaacctccccagctgggtgggggg
ctatggggggagctgagctgccaggagcgggggcgggtccaggtcacggtggactacttg
tcggccacagatcgggacagcgagaactccaggctgatgtacatgctggctcggaggcct
ggcaggggggagctgcagagagacgggctgagcgtggacaagttctcccagcaggacctg
ctgcagggacacgtctactacgtccacactggaggagagattggacctgatccagtggtt
gacatcatcaccctcatcatctctgatggggaggccggaggaacagacggctgttgctac
ggagatgcccctcccccaccagtgcctcttcatggtacacttcctgtatgcgaccttaac
atcaccattcttccagtcaacaatgaagtcccatctatcactctgggtgcgtccatgttg
atggtggatgagggctcttcttcctgtctttgtgggggggtcctggcagcctcagaccct
gacagcccccccgatcagctgacctttcacctggagactcctcccctgcacggctacctg
gaaaacacccagccgacgccaggctccgagaagagcaacgtaggagtccgagttgaatcc
ttcagtcttgtccacctgaccatgggtttaatcaactacgtccaatcagaaagcaaaggg
gcggagccaactatcgatcagctgtccatcagtgtaagtgatgggttgcaccgctccgcc
cccgtccccttttacatcatcatcagtccaaccaatgatgaaacgccttcccttctgctc
gccaacttcacggtgaacgagggcgggatgagggagctgactccgtctattctgaacggt
tttgatctggactcccccctggacaccctgaccttcacggtggtgcagccgccggctcac
ggaagtctgatcaatggcatctacagcttggagaagagccgctacacggacacaggagcg
gagctgctgcagaggagcctccccatcacctccttcaccctgcaggagctccaacaaggc
atgaagatcgtgtacatgcacgatgacacagagaccctgcaggatgcggtggctctgcga
ctgacagacggtgtccacacagtgcaggggagggccagggtcaccttgctgccactgaac
gatgagaggccacggctgctgagaaacgctgggctggaggtggacgctggtgagcgcagg
gtgatctccagcgtggctctggaggcagaggacccggacaaccccccgcagcagctgttc
tactccctaatcgctgcgccacgcttcggaaagctacagataaagaaggagtcggcttgg
agcgagctgtcggccggtcagaacttcactcaggacgatgtggagatgaaccgtctgtgg
tatgctcacactgccgccacaaacgcagcagggttcaaaggtcacgacagcttccgcttc
accctcagcgacctggacaacgagactccggcacagagcttcttcatcaacgtgcacact
gtgcagaaaggtgagctgctgctgctcagcagggggggggcactgacggaggggcagcgg
ttggtcctgaacaccaacatcctgctggcgtgggactcttcgggccatccagaggagctg
gtctacacgctgtcgccccccccccggcacggcctggtccacggcgtccagcagccgggc
gtccctctggccagcttcactcagctggacatagccgcacatcgagtgtgctacacccac
gacaacagccaccacgcagacacagactccttcagttttgtggtcaccaacggcgcctcg
tcccgcagtggaactctgcacttcaccattgagcacggtgaccgcatcccaccaaccctc
aaccacaacacgggcctccggctgcaggatggctccacggagaccatctcacctgcccag
atgcagctcaccgaccccgacaccgccacctccaacttgagcttcgtcatcacgcagccg
ccaggccatggcagactgctgctgagaggagtccctctgtttcccccactggggttcacc
caaacggatgtggaccagctgaatctggattaccaacaccagctgggcagcctggcggac
atagacaggttctacttcctgccgaccgacgggaccaacatcgggtacctggagtttgga
cagctgagggaggagccggctgtctttaacatacaggtcgatcgtgtggataggttaccg
cctagtctgtccaccaggcgaattcctaacactgtggtgggtctaggcgggggccggtat
ggcatcttcatcacctcaaaacacctgcaggcctccgaccctgacagcccagcggaagag
ctggagttctccatcagcaggcctccgcagttcggctacctggaaaatactctcacagga
gcatacatcaaaggttgtttcacgcagcgggacgtggaccagcgagccgtggccttcatc
gtccctgccgacatggaggtgacggcggacagcttccagttcctcctcactgaccctgct
ggaaacaccatgctaccccaaatactggagctgtcctggtcccgggtggagctgtcggca
acctgctacagaacctgcgagacggtgggaacgcttcagatctacatccagcgcagtggg
gggagcgccgacccggcatatgtcgccatccaggtggaggaaggttcggccaaaccgggg
agagatttcactcacagcaccgctgctctcatccagtttgacccaggagtgagtgtgaaa
acctggaacatttacctgatagacgacggtctggaggaaaaccacgagactttcactgtc
accctgaaaaatgcaaaaaatgctgtcctgggacagaggacgtcagctagtgtcgagatc
attgaccccagaggaggaaggtgtaatcctgatgacctaatggtggaggaggaggatgag
cgactccctactgccccccctccggctcaactccctgacccccccagagtgaaggaggag
gacagcgtcacagacatcgaggcagagctgctgtgggagaaccagccccacccccctcaa
ggagaagtccctaaccgccggccctacctggattacagggagggggaatcaaaagatcag
gcggccccccacagccaaagatcctcccccagcactgggagctccgggagctctgtaccc
agggtcatgcatagaggattgaaggtccagctgtcaggagggaggaggtctgaggagaag
gtctggacgttccacagtctgactcctctccggctggaggagctgaagcagggcgatgct
gggaggagctggtcccctgacagtccccccctgcaggatcctcctcagatggatcatcca
gaacccagacacaacccagagctacgtcggcacaagacggggaagtcagtgagcagctgg
tgtgctgaaggctggactcactacaggaggcgctgttacaccgtcagcttgtctgtggcc
agctgggccagcgcagagaggagctgctcaatgctgttcaacagcagcctgaccggcgtg
aattccagaagagatatgacctggctatggaagtttgcagggaggaagccgttttggatc
ggtctgtctggaggtccgggtcgctggatgtgggctgacggtcagtcagtctccttctcc
agactgagcggggagacgctgctgggctcagactgtgtgctggttgaaaaccccagaagc
tggatctccacaagctgctcccccgaaactcaacacacattcatctgttcctctcaggat
cgtactcactga
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integrated database retrieval system
