Gymnodraco acuticeps: 117542626
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Entry
117542626 CDS
T09661
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117542626 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117542626 (exosc7)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117542626 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
117542626 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117542626
NCBI-ProteinID:
XP_034066303
UniProt:
A0A6P8TQA1
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKVTLGDTAVLV
GVKADIGKPRPKVPNEGYVEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNKHSVD
LKSLCISAGEHCWVLYVDVLLLQCDGNLYDAISVAIKAALFNTKIPRVHISADEEGGKEI
ELSDDPYDCVRLNVENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTHKGTITCTR
KVGGGSLDPESIFEMTEAGKRVGKALHAPLMKLLQQEESLGKARQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtacaagttagcgaggctgaaaaggtgtatatccttcatggtatacgggat
gacttgcgagtggacggaagaggctgtgaggactacagacacatggaaatagagactgat
gtggtgtctaacacagacggatcagccaaagtcacactgggggacacggcggttctagtc
ggggttaaagctgacattggaaaaccgaggcccaaggtgccaaatgaaggctacgtggag
ttctttgttgactgctcagccaatgcaacccctgagtttgagggcagaggaggcgaggag
ctaggcacggagctgagtaacacactctacaaagtcttcaacaacaaacacagtgtggac
ctgaagagcctgtgtatcagcgcaggagagcactgctgggtcctttacgtggacgtactg
cttttgcagtgtgatggaaacctttacgatgccatctcagtagccatcaaggctgctctc
ttcaacacaaaaattcccagagtgcacatatcggccgacgaggaaggagggaaggaaatt
gagctgtcagacgacccttatgattgcgtgagactcaatgtagaaaacgttccttgcatc
gtgacgttgtgcaaggtgggccacaggcatgtggtggatgcgactctgcaggagaaggcc
tgctctgtggccagcctgataatatctgtcacacacaagggcacgatcacctgcaccagg
aaggtgggcggaggcagcctggatccggagagcatctttgaaatgacagaggcaggtaaa
cgtgtcgggaaggccctccatgctccgctcatgaagctgctgcagcaggaggagagtttg
gggaaagcacgacagaaagttggcttccttggttaa
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