KEGG   Gymnodraco acuticeps: 117542626
Entry
117542626         CDS       T09661                                 
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
gacu  Gymnodraco acuticeps
Pathway
gacu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gacu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117542626 (exosc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gacu03019]
    117542626 (exosc7)
Messenger RNA biogenesis [BR:gacu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     117542626 (exosc7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     117542626 (exosc7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 117542626
NCBI-ProteinID: XP_034066303
UniProt: A0A6P8TQA1
LinkDB
Position
Unknown
AA seq 291 aa
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKVTLGDTAVLV
GVKADIGKPRPKVPNEGYVEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNKHSVD
LKSLCISAGEHCWVLYVDVLLLQCDGNLYDAISVAIKAALFNTKIPRVHISADEEGGKEI
ELSDDPYDCVRLNVENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTHKGTITCTR
KVGGGSLDPESIFEMTEAGKRVGKALHAPLMKLLQQEESLGKARQKVGFLG
NT seq 876 nt   +upstreamnt  +downstreamnt
atggcaacagtacaagttagcgaggctgaaaaggtgtatatccttcatggtatacgggat
gacttgcgagtggacggaagaggctgtgaggactacagacacatggaaatagagactgat
gtggtgtctaacacagacggatcagccaaagtcacactgggggacacggcggttctagtc
ggggttaaagctgacattggaaaaccgaggcccaaggtgccaaatgaaggctacgtggag
ttctttgttgactgctcagccaatgcaacccctgagtttgagggcagaggaggcgaggag
ctaggcacggagctgagtaacacactctacaaagtcttcaacaacaaacacagtgtggac
ctgaagagcctgtgtatcagcgcaggagagcactgctgggtcctttacgtggacgtactg
cttttgcagtgtgatggaaacctttacgatgccatctcagtagccatcaaggctgctctc
ttcaacacaaaaattcccagagtgcacatatcggccgacgaggaaggagggaaggaaatt
gagctgtcagacgacccttatgattgcgtgagactcaatgtagaaaacgttccttgcatc
gtgacgttgtgcaaggtgggccacaggcatgtggtggatgcgactctgcaggagaaggcc
tgctctgtggccagcctgataatatctgtcacacacaagggcacgatcacctgcaccagg
aaggtgggcggaggcagcctggatccggagagcatctttgaaatgacagaggcaggtaaa
cgtgtcgggaaggccctccatgctccgctcatgaagctgctgcagcaggaggagagtttg
gggaaagcacgacagaaagttggcttccttggttaa

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