Gymnodraco acuticeps: 117543106
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Entry
117543106 CDS
T09661
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117543106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117543106
03036 Chromosome and associated proteins [BR:
gacu03036
]
117543106
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117543106
Coactivators
SAGA/TFTC/STAGA complex
117543106
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117543106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
117543106
NCBI-ProteinID:
XP_034067068
UniProt:
A0A6P8TS95
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MRLTSERDWAKMAAGSDLLDDVFFNTEVDEKVVSDVVGSLESELTGAGPTNTTTRVQFAA
NHLGNSAVISHSNVQCLKMGLSQQELAKAGTGVQGGVISSTGSPGSSMDGAAENTSSMTA
TQPKPGTASGVVTVVSGATSGVDKPATTAVQTLNGSAVLMNCHVTGGSGGKTSQSAVTLV
NTGHVSASGEGATVLSANTITGIRTSSTSAQHVVISSQPSVKSVPTVTLVRPPMQTPPNP
SHTVLTSPTSTTGSLINKFDSTKTIMQAVATGTPANMRSPTVFQHVRTSVPSTIAATPPA
GIRAIAPQVLAPRLTQPQQNTPNIQNIQLPPGMVLVRSESGQLLVIHQQTLAQIQAQTQS
QSAMTPRPAAPSSTPPVQITSLQAPGASLLPRPVAPPTTIIKQGTTVQTTVAATTTLQRP
PVLQNTIMLGGTSASTGPPIGAPTPVQPGCAQRGTGTPVTPTAISAETLENVKKCRNFLS
TLIKLASSEKQSSETSANVKELVKNLLEGKMEPEDFTSRLYRELNSSPQPYLVPFLKRSL
PALRQLTPDCEAFIHQSLLPLPSNQPATASTALAAVVLRPPLSTAPTMATSTAGANTTVI
SLTQTPHSKPALTIVRPQVTMAQSPMVTVRGQSHSRIIVGQPQMAKPLQTAVRQTFTPVV
RGGQVVSQTPLSAAQRLKEAGRGPFRDDDDINDVASMAGVNLSEESARILATNSELVGTV
TRSCNDEAFLSPSLLTRRALEIGKKFGVSELETDVINYISYAAQQRLRHLLEKVSQVAQH
KNITFKEEERCEQVSDVRTQLKFFEQLDQMEKQRKEGLEREILLKAAKSRSRQEDPEQLR
LKQKAKEMQQQELAQIRQREANLAALAAIGPRKKRKMDSPVRGASAEGSGAGPSQPGGSG
AASSRQFMRQRITRVNLKDLLFCLENERETSRSHLLYKGFLK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcacgagcgagcgcgactgggcaaagatggcggcgggctccgatttgcttgat
gatgttttcttcaacacagaggtggacgaaaaagtagtcagtgatgtagtgggatctctg
gagtctgaactaactggagcagggcccaccaacacaacgaccagggttcagtttgcagca
aatcacctcggaaactcagctgtaattagtcattccaatgttcagtgcctcaaaatggga
ctttcacaacaagagctcgctaaagcagggacaggagtacaaggaggtgtcattagcagt
acagggtccccgggttcaagtatggatggagccgccgagaacacatcgagtatgacagcc
actcagcctaaaccggggacagctagcggagtcgttacggtggtatcgggtgcaacatct
ggtgtggataaacctgcaactactgctgtgcaaactctgaatggaagtgctgtgttgatg
aactgtcatgtcaccggaggcagtggcggcaaaacctcacagtcagctgtcacacttgta
aacactggacatgtctctgcgagtggagaaggcgcaacagttttgtctgcaaatactatt
accggtatacgaacttcttccacgagtgcgcagcatgttgtgatttcgtctcagccatca
gtaaaaagtgtacccactgtcacgcttgtgaggccacctatgcaaactccccctaacccg
tctcacaccgtgttaacatcacccactagcacgaccggctcgcttatcaacaaattcgac
tccacaaaaactataatgcaggctgttgcgacagggacaccagccaacatgaggagcccg
actgtttttcaacatgtgaggacttcagtaccttcaacaatcgctgccactcctcctgct
ggaatacgagctattgctccacaggtgttggccccacgactcacccagccccaacaaaac
actcccaatatccaaaacatccagctccctccaggtatggttttggtccgcagtgagagt
gggcagctgctggtgattcaccagcagaccttggctcagatccaggctcagacgcagtcc
caaagcgccatgaccccccgacctgcagccccctccagcactccacctgtccagatcact
tctcttcaggctccgggcgcgtccctgctgcctcgtcccgtcgccccccccaccaccatc
attaaacagggtaccacagtccagacaactgttgcagccaccaccacactgcagaggcct
ccagtactgcagaacaccatcatgctgggaggaacgtctgcctccacgggaccgccgata
ggagcccccaccccggtgcagcctggatgtgcacagagggggactgggacccctgtcact
ccaacagctatctcagctgagaccctggagaatgtaaagaagtgtagaaactttctgtcc
acgctgatcaagttggcctctagcgaaaaacagtcttctgagacttcggccaacgtgaag
gagctggtcaagaacttactggaagggaagatggagcctgaagatttcaccagtaggttg
taccgggagctcaactcctcgcctcagccgtaccttgtgcctttcctgaagaggagcctc
ccagcgctgcgtcagctgaccccagactgcgaggccttcatccatcagagcctgctgcct
ctgcccagcaatcagcctgcaaccgcctccaccgccctcgccgccgtggtgctgagacct
cccctctccacggcccccaccatggccaccagcaccgccggggccaacactacagtcatc
agcctcactcagactcctcacagtaaacctgcactgacgatagtgaggccccaggtgacg
atggctcagtctcccatggtgacagtcagaggacaatcccatagccggatcattgtgggc
cagccgcagatggccaaaccgctccagacagcagtgaggcagacgtttactcccgtggtc
agaggagggcaggtggtcagtcagactcctctcagtgctgctcagaggctcaaggaagca
ggaaggggacccttcagggatgacgatgatatcaatgatgtggcctcgatggcaggagtc
aacttgtcggaggagagtgcccgtatcttagcaaccaattctgagcttgttggcacggtg
actcggtcctgtaatgatgaggcctttctctccccctcgttactcacccggagagctctg
gagattggtaagaagtttggtgtcagcgagttggagacagatgtgataaactacatttcc
tacgccgcacagcagcgactcagacatctgctggaaaaagtgtcacaagtggcgcagcat
aaaaatataaccttcaaggaggaagagcgctgcgagcaggtcagcgatgtgcgaacccaa
cttaaattctttgagcagctggatcagatggagaagcaaaggaaggaagggctggagagg
gagattctgttgaaggctgctaagtctcggtcacggcaagaggaccccgagcagctgaga
ctcaaacagaaggccaaagagatgcagcagcaggagctggctcagatcagacagagagaa
gccaacctagcggcgctggcagctatcggcccgaggaaaaaacggaaaatggactctcct
gttagaggagccagtgcagagggctcgggggcgggcccctctcagcccggcggctccggt
gcagcgagctccagacagtttatgcgacagcgcattaccagagtcaacctcaaggacctg
ctgttctgtctggagaatgaaagagagaccagtcgctctcacttgctttataaaggcttc
ctcaaatag
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