Gymnodraco acuticeps: 117543190
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Entry
117543190 CDS
T09661
Symbol
u2af2a
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2a isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117543190 (u2af2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gacu03041
]
117543190 (u2af2a)
Spliceosome [BR:
gacu03041
]
Complex A
U2 snRNP components
U2 related factors
117543190 (u2af2a)
Complex B
117543190 (u2af2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MUD2_C
RRM_occluded
DUF8489
RRM_7
Transformer
F07F6_N
Motif
Other DBs
NCBI-GeneID:
117543190
NCBI-ProteinID:
XP_034067196
UniProt:
A0A6P8TSG1
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MSDFDEFERQLSENKQGDVFSDSLTAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRD
RRGESKEERRHRRSSPASFPVDNAGSRSPHREVPAKKKNKVKKYWDVPPPGFEHITPMQY
KAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMD
FFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIR
RPHDYQPLPGMSENPSVYVPGTQPINGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTS
FGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKN
ATLTSINQTPVTLQVPGMNSSVTQMGGLPTEVLCLMNMVAAEELLDDDEYEEIVEDVKDE
CSKYGQVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCD
PDAYHRRDFW
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcgacgaatttgaaaggcagctttctgaaaacaaacaaggtgatgtattc
tcagactctttgaccgctgaaagggacaaagagaaccgccaccaccgccggtcttcctct
cgtagccgaagcagagagaggaaaaggaggagcagagacagggatagacgcagcagggac
cgccgtggggaaagtaaggaggagcgcagacacaggcgcagctcaccagccagcttccct
gtggacaatgctggaagccgttctccacaccgcgaggtgccggcaaagaagaagaacaag
gttaaaaagtactgggatgtccctccaccgggttttgaacacatcactcccatgcagtac
aaagccatgcaagctgcaggccagatcccagccacagccctcctgcccaccatgactcca
gatggcctggctgtgacccccaccccggtgcctgtagtgggcagccagatgacccggcag
gcccgccggctctacgtgggtaacatcccatttggaatcacagaggagtccatgatggac
ttcttcaatgcccagatgcgtttgggtggtcttactcaggcccctggaaaccctgtgctt
gcagtacagatcaaccaggataagaactttgccttccttgagttccgttcagtggacgaa
actacacaggcaatggcctttgatggcatcatctttcaaggccagagtctcaagatccgt
cgtccacatgattaccaacctctacccggcatgagcgagaaccccagtgtctatgtgcct
ggtactcagccaattaatggtgtcgtttccacagttgttcctgactcagcccacaagctc
ttcattggaggtttgcccaactacttgaacgatgaccaggtgaaggagctcttgacatcc
tttggtcccctgaaggctttcaacctggtgaaggacagtgctacaggcttatctaaagga
tatgcgttttgtgaatatgttgatgtcaaccttaatgaccaggctattgctgggctgaac
ggcatgcagctgggagacaagaagctcctggtgcagagagccagcgtgggatccaagaac
gccactctaacgagtataaatcagaccccagtgacgctgcaggtgccgggtatgaacagc
tcggtgactcagatggggggcctgcccaccgaggtgctgtgtctgatgaacatggtggcc
gccgaggagctgctggatgatgacgagtatgaggagatcgtggaggacgtcaaggacgag
tgcagcaagtacggtcaggtcaagagcatcgagatcccccgacctgtggacggcctggag
gtgcccggcaccggcaagatctttgtggagttcatgtccgtttttgactcccagaaggcc
atgcaggggctgacgggaaggaagtttgccaacagggtggtggtgaccaaatactgcgat
ccagatgcttatcaccgccgagacttctggtag
DBGET
integrated database retrieval system
