Gymnodraco acuticeps: 117543394
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Entry
117543394 CDS
T09661
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117543394 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117543394 (zcchc7)
03016 Transfer RNA biogenesis [BR:
gacu03016
]
117543394 (zcchc7)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
117543394 (zcchc7)
Transfer RNA biogenesis [BR:
gacu03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
117543394 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
117543394
NCBI-ProteinID:
XP_034067541
UniProt:
A0A6P8TTA0
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MYFMCQDWEELEDDLYREDEGDSEGSEDNSELEFRLYSQLHYSSNAGVVEETGDEEGEQD
SEHLEKPEQIVNVDREQDTTGKSRPLSPDLSKLLQHKKKDKKPDKQKKGKSNPKVQRSLT
SLMEEVIVIDSGPDVISISEDDSADDTAAAVDTAAAEEDGVCALKGRSLKQLQTSTPAPQ
GTQKRTLGIPVTVVSSNSESDSSESESNSESESSDDLENWMILGPGNQDGDQSISLNLEG
GSDSSADAEEKASWLVSSKDKDAGIYNRDKGARATGPRLSNRYYTDKSVQCRNCSKNGHL
SKNCPESKQLVPCYLCGTPGHLSSECPNKHCNNCGLPGHLYNSCRDRAHWHQRCERCFMT
GHSTNACPEIWRQYHITTETRTPLKPKGKDRGRTPAYCYNCSRRGHFGHVCTRKRMFNGT
YPSTPFINYYDTKKEIKSRVKWILLKVKELKKNGLLTNSSQTPFTPGPPNKRQKFSHHES
NQQTHHTPRQSPSNHKPGHVFFNDDDFQAPAPKARWNNRPKQQEGTEKPWKPKRPVPTSI
KPLPPKKIILNETDDFPRGGGKRGDTEKKGKKLRKKNHVPEKLPKYQPHWLETEEMQGSA
SKQVKGKRNRYRKNSDASQYPTDENLFTIKQRKRHRWR
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtacttcatgtgccaggattgggaggagttggaggacgatctctatcgggaggatgaa
ggggactctgaggggtcagaggacaacagcgagctggagttccgcctctacagccagctc
cactactcctctaatgccggggtggtggaggagacaggagatgaggagggggaacaggac
agtgagcatctggagaaacctgagcagattgtaaatgtggacagagaacaggacacaact
ggaaaaagtaggccgctgtcacctgatttgagcaagttactacagcacaagaagaaggac
aagaaacctgataaacagaaaaagggtaaaagtaaccctaaggttcagaggtcattaaca
tcattaatggaggaggtcatcgtgattgactccggccctgatgtcatctccatctctgag
gatgacagtgctgatgacactgctgctgctgttgacactgctgctgctgaggaagatgga
gtctgcgccttaaagggacgaagcttaaaacagctgcagacttcaaccccggccccacag
ggaacccagaaaagaactttaggcatcccggtgacggtggtctccagcaactcagagtct
gattcaagcgagtctgaatcaaattctgagtccgagtcatctgatgatctggagaactgg
atgatcctgggtccagggaaccaggacggagaccagagcatctcacttaacctggaggga
gggtctgacagcagcgcagatgctgaagagaaggccagctggttggtttcgtcaaaggat
aaggacgctgggatctataacagagacaagggtgcgagagcaacggggccgcggctgtca
aaccgatactacaccgacaagagtgtccagtgtagaaactgcagcaagaacggacatctc
tccaagaactgcccagagtccaaacagttggtgccctgctatctttgtggaaccccaggc
cacctgtcaagtgaatgtcccaacaagcactgcaacaactgcggcctgcctgggcacctc
tacaactcctgcagagacagagcgcactggcaccagcgctgtgagcgctgcttcatgaca
ggccactcaacaaatgcttgtccagagatctggagacagtatcacatcacaactgagaca
cgcactcctttgaagccgaagggaaaagaccggggtcggacccccgcctactgctacaac
tgctccaggagagggcactttggacatgtgtgtacacgaaaaaggatgttcaacgggacg
tatcccagcacaccgtttatcaactactacgacactaagaaggagatcaaaagtagagta
aagtggatattattgaaggttaaagagctgaaaaaaaatggccttttaactaacagttct
cagacccctttcactccaggaccgccaaacaagagacagaagttcagccatcacgaaagc
aaccaacagacccaccatacacctcgccaaagccctagcaaccacaaaccaggccatgtc
tttttcaatgacgatgactttcaggctccagcacccaaagcgagatggaacaataggccc
aaacaacaggaaggcactgagaaaccatggaaacccaagagaccggtccccacttccata
aaacctcttccacccaaaaaaataattttgaatgaaacggatgactttcccagaggagga
ggcaaaagaggagatacagagaagaaggggaagaagttgaggaaaaagaatcatgttcct
gaaaagctaccaaaataccaacctcattggcttgaaactgaagagatgcaggggtcagcg
tcaaagcaagtgaaaggaaagaggaaccgataccggaagaactccgatgcttcacagtac
ccaacggatgagaacctgtttaccatcaaacagaggaaacgccacagatggcggtga
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